Protein–RNA interactions for Protein: P20393

NR1D1, Nuclear receptor subfamily 1 group D member 1, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1D1P20393 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.41□□□□□ -2.02
NR1D1P20393 AL355802.3-201ENST00000607571 545 ntBASIC2.41□□□□□ -2.02
NR1D1P20393 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.41□□□□□ -2.02
NR1D1P20393 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.41□□□□□ -2.02
NR1D1P20393 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.41□□□□□ -2.02
NR1D1P20393 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
NR1D1P20393 AC241585.2-209ENST00000638217 143 ntBASIC2.41□□□□□ -2.02
NR1D1P20393 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
NR1D1P20393 AC002543.1-201ENST00000299783 1954 ntBASIC2.4□□□□□ -2.02
NR1D1P20393 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
NR1D1P20393 Y_RNA.252-201ENST00000364556 101 ntBASIC2.4□□□□□ -2.03
NR1D1P20393 RNU1-52P-201ENST00000384190 164 ntBASIC2.4□□□□□ -2.03
NR1D1P20393 Y_RNA.463-201ENST00000384271 102 ntBASIC2.4□□□□□ -2.03
NR1D1P20393 RNU6-1222P-201ENST00000384615 107 ntBASIC2.4□□□□□ -2.03
NR1D1P20393 RNU6-331P-201ENST00000384724 107 ntBASIC2.4□□□□□ -2.03
NR1D1P20393 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
NR1D1P20393 CYCSP48-201ENST00000417124 323 ntBASIC2.4□□□□□ -2.03
NR1D1P20393 EIF1AXP1-201ENST00000419267 435 ntBASIC2.4□□□□□ -2.03
NR1D1P20393 MTND3P9-201ENST00000429526 346 ntBASIC2.4□□□□□ -2.03
NR1D1P20393 AL035666.1-201ENST00000446195 348 ntBASIC2.4□□□□□ -2.03
NR1D1P20393 IFNA11P-201ENST00000446352 526 ntBASIC2.4□□□□□ -2.03
NR1D1P20393 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.4□□□□□ -2.03
NR1D1P20393 RNU6-470P-201ENST00000515954 104 ntBASIC2.4□□□□□ -2.03
NR1D1P20393 RNU6-991P-201ENST00000516168 107 ntBASIC2.4□□□□□ -2.03
NR1D1P20393 SCARNA16.2-201ENST00000516520 172 ntBASIC2.4□□□□□ -2.03
NR1D1P20393 AC109329.1-201ENST00000518744 317 ntBASIC2.4□□□□□ -2.03
NR1D1P20393 IGLV3-17-201ENST00000519099 244 ntBASIC2.4□□□□□ -2.03
NR1D1P20393 AC023442.1-201ENST00000531247 422 ntBASIC2.4□□□□□ -2.03
NR1D1P20393 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.4□□□□□ -2.03
NR1D1P20393 SUB1P3-201ENST00000564581 315 ntBASIC2.4□□□□□ -2.03
NR1D1P20393 AC090897.2-201ENST00000581715 130 ntBASIC2.4□□□□□ -2.03
NR1D1P20393 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.4□□□□□ -2.03
NR1D1P20393 AC016925.2-201ENST00000605108 242 ntBASIC2.4□□□□□ -2.03
NR1D1P20393 AC040896.1-201ENST00000613819 479 ntBASIC2.4□□□□□ -2.03
NR1D1P20393 U4.3-201ENST00000621047 82 ntBASIC2.4□□□□□ -2.03
NR1D1P20393 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
NR1D1P20393 MTND5P9-201ENST00000503854 1755 ntBASIC2.4□□□□□ -2.03
NR1D1P20393 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.4□□□□□ -2.03
NR1D1P20393 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.39□□□□□ -2.03
NR1D1P20393 RNU6-1141P-201ENST00000364520 107 ntBASIC2.39□□□□□ -2.03
NR1D1P20393 SNORA51.11-201ENST00000384442 131 ntBASIC2.39□□□□□ -2.03
NR1D1P20393 MIR764-201ENST00000390811 85 ntBASIC2.39□□□□□ -2.03
NR1D1P20393 RNU6-308P-201ENST00000390957 107 ntBASIC2.39□□□□□ -2.03
NR1D1P20393 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.39□□□□□ -2.03
NR1D1P20393 RNU4-53P-201ENST00000410828 140 ntBASIC2.39□□□□□ -2.03
NR1D1P20393 AC243428.1-201ENST00000421099 264 ntBASIC2.39□□□□□ -2.03
NR1D1P20393 RPL23AP95-201ENST00000426806 265 ntBASIC2.39□□□□□ -2.03
NR1D1P20393 SUMO1P4-201ENST00000429430 302 ntBASIC2.39□□□□□ -2.03
NR1D1P20393 RPL23AP50-201ENST00000434149 455 ntBASIC2.39□□□□□ -2.03
NR1D1P20393 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.39□□□□□ -2.03
NR1D1P20393 AC068781.1-201ENST00000488231 618 ntBASIC2.39□□□□□ -2.03
NR1D1P20393 AC108210.2-201ENST00000503681 201 ntBASIC2.39□□□□□ -2.03
NR1D1P20393 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.39□□□□□ -2.03
NR1D1P20393 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.39□□□□□ -2.03
NR1D1P20393 RNU6-548P-201ENST00000517083 115 ntBASIC2.39□□□□□ -2.03
NR1D1P20393 RN7SKP295-201ENST00000517264 153 ntBASIC2.39□□□□□ -2.03
NR1D1P20393 RNU6-988P-201ENST00000519081 107 ntBASIC2.39□□□□□ -2.03
NR1D1P20393 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.39□□□□□ -2.03
NR1D1P20393 AL162730.1-201ENST00000605734 292 ntBASIC2.39□□□□□ -2.03
NR1D1P20393 AC007792.1-201ENST00000623023 402 ntBASIC2.39□□□□□ -2.03
NR1D1P20393 AC091925.1-201ENST00000623204 462 ntBASIC2.39□□□□□ -2.03
NR1D1P20393 CTSLP2-204ENST00000629029 392 ntBASIC2.39□□□□□ -2.03
NR1D1P20393 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
NR1D1P20393 ZNF299P-201ENST00000406845 1804 ntBASIC2.38□□□□□ -2.03
NR1D1P20393 RBBP8P1-201ENST00000449447 1844 ntBASIC2.38□□□□□ -2.03
NR1D1P20393 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
NR1D1P20393 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
NR1D1P20393 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
NR1D1P20393 Y_RNA.148-201ENST00000363557 117 ntBASIC2.38□□□□□ -2.03
NR1D1P20393 SNORD32A-201ENST00000364805 84 ntBASIC2.38□□□□□ -2.03
NR1D1P20393 RNU6-142P-201ENST00000384019 107 ntBASIC2.38□□□□□ -2.03
NR1D1P20393 RNU6-639P-201ENST00000384074 107 ntBASIC2.38□□□□□ -2.03
NR1D1P20393 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
NR1D1P20393 MIR1289-2-201ENST00000408360 111 ntBASIC2.38□□□□□ -2.03
NR1D1P20393 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.38□□□□□ -2.03
NR1D1P20393 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
NR1D1P20393 AC078809.1-201ENST00000427601 140 ntBASIC2.38□□□□□ -2.03
NR1D1P20393 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.38□□□□□ -2.03
NR1D1P20393 RPL17P19-201ENST00000489069 552 ntBASIC2.38□□□□□ -2.03
NR1D1P20393 RPL22P13-201ENST00000493291 347 ntBASIC2.38□□□□□ -2.03
NR1D1P20393 AC022493.2-201ENST00000506122 481 ntBASIC2.38□□□□□ -2.03
NR1D1P20393 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.38□□□□□ -2.03
NR1D1P20393 SNORA25.11-201ENST00000515935 105 ntBASIC2.38□□□□□ -2.03
NR1D1P20393 AC115990.1-201ENST00000526957 301 ntBASIC2.38□□□□□ -2.03
NR1D1P20393 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.38□□□□□ -2.03
NR1D1P20393 AC105137.2-201ENST00000569073 466 ntBASIC2.38□□□□□ -2.03
NR1D1P20393 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.38□□□□□ -2.03
NR1D1P20393 AC009318.2-201ENST00000610917 651 ntBASIC2.38□□□□□ -2.03
NR1D1P20393 AC097372.5-201ENST00000623665 376 ntBASIC2.38□□□□□ -2.03
NR1D1P20393 AP000553.5-201ENST00000641933 54 ntBASIC2.38□□□□□ -2.03
NR1D1P20393 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
NR1D1P20393 Z75746.1-201ENST00000440243 2080 ntBASIC2.38□□□□□ -2.03
NR1D1P20393 AP000560.1-201ENST00000624150 1937 ntBASIC2.38□□□□□ -2.03
NR1D1P20393 AC009541.1-201ENST00000438279 2662 ntBASIC2.37□□□□□ -2.03
NR1D1P20393 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.37□□□□□ -2.03
NR1D1P20393 RNU6-1010P-201ENST00000362757 107 ntBASIC2.37□□□□□ -2.03
NR1D1P20393 SNORD50.1-201ENST00000362987 71 ntBASIC2.37□□□□□ -2.03
NR1D1P20393 Y_RNA.145-201ENST00000363527 102 ntBASIC2.37□□□□□ -2.03
NR1D1P20393 RNU6-595P-201ENST00000363944 107 ntBASIC2.37□□□□□ -2.03
NR1D1P20393 SNORA67.1-201ENST00000364749 141 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms