Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 SNORA31.4-201ENST00000516049 129 ntBASIC5.18□□□□□ -1.58
CD44P16070 RNU6-557P-201ENST00000516842 110 ntBASIC5.18□□□□□ -1.58
CD44P16070 RNU6-928P-201ENST00000516876 104 ntBASIC5.18□□□□□ -1.58
CD44P16070 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
CD44P16070 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CD44P16070 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
CD44P16070 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CD44P16070 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CD44P16070 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC5.18□□□□□ -1.58
CD44P16070 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.18□□□□□ -1.58
CD44P16070 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CD44P16070 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CD44P16070 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
CD44P16070 MFSD8-236ENST00000641509 4050 ntBASIC5.17□□□□□ -1.58
CD44P16070 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CD44P16070 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CD44P16070 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CD44P16070 SNORD115-39-201ENST00000363694 82 ntBASIC5.17□□□□□ -1.58
CD44P16070 SNORD38.1-201ENST00000363863 68 ntBASIC5.17□□□□□ -1.58
CD44P16070 RNU6-442P-201ENST00000383968 104 ntBASIC5.17□□□□□ -1.58
CD44P16070 SNORD30.1-201ENST00000391309 70 ntBASIC5.17□□□□□ -1.58
CD44P16070 MIR921-201ENST00000401133 56 ntBASIC5.17□□□□□ -1.58
CD44P16070 AL356387.2-201ENST00000422272 243 ntBASIC5.17□□□□□ -1.58
CD44P16070 AC087499.4-201ENST00000448505 178 ntBASIC5.17□□□□□ -1.58
CD44P16070 RNU1-6P-201ENST00000516290 144 ntBASIC5.17□□□□□ -1.58
CD44P16070 AC006130.2-201ENST00000586202 326 ntBASIC5.17□□□□□ -1.58
CD44P16070 uc_338.18-201ENST00000615451 175 ntBASIC5.17□□□□□ -1.58
CD44P16070 AC140113.4-201ENST00000622087 222 ntBASIC5.17□□□□□ -1.58
CD44P16070 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC5.17□□□□□ -1.58
CD44P16070 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CD44P16070 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
CD44P16070 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CD44P16070 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CD44P16070 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC5.17□□□□□ -1.58
CD44P16070 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CD44P16070 AP001273.1-201ENST00000624493 3152 ntBASIC5.16□□□□□ -1.58
CD44P16070 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CD44P16070 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CD44P16070 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CD44P16070 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC5.16□□□□□ -1.58
CD44P16070 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CD44P16070 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CD44P16070 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CD44P16070 AC005332.5-201ENST00000591222 2919 ntBASIC5.16□□□□□ -1.58
CD44P16070 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CD44P16070 Y_RNA.171-201ENST00000363760 102 ntBASIC5.16□□□□□ -1.58
CD44P16070 U8.11-201ENST00000384699 133 ntBASIC5.16□□□□□ -1.58
CD44P16070 MIR522-201ENST00000385071 87 ntBASIC5.16□□□□□ -1.58
CD44P16070 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC5.16□□□□□ -1.58
CD44P16070 ZFRP1-201ENST00000457579 2970 ntBASIC5.16□□□□□ -1.58
CD44P16070 U8.18-201ENST00000459285 133 ntBASIC5.16□□□□□ -1.58
CD44P16070 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC5.16□□□□□ -1.58
CD44P16070 RNU6-1291P-201ENST00000516591 104 ntBASIC5.16□□□□□ -1.58
CD44P16070 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.16□□□□□ -1.58
CD44P16070 MIR4458-201ENST00000578872 75 ntBASIC5.16□□□□□ -1.58
CD44P16070 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.16□□□□□ -1.58
CD44P16070 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CD44P16070 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CD44P16070 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CD44P16070 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CD44P16070 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.15□□□□□ -1.58
CD44P16070 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CD44P16070 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CD44P16070 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.15□□□□□ -1.58
CD44P16070 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CD44P16070 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CD44P16070 SNORD115-2-201ENST00000362842 82 ntBASIC5.15□□□□□ -1.59
CD44P16070 RNU6-268P-201ENST00000364174 107 ntBASIC5.15□□□□□ -1.59
CD44P16070 SNORD31B-201ENST00000364977 69 ntBASIC5.15□□□□□ -1.59
CD44P16070 SNORD115-20-201ENST00000365099 82 ntBASIC5.15□□□□□ -1.59
CD44P16070 RN7SKP213-201ENST00000410746 298 ntBASIC5.15□□□□□ -1.59
CD44P16070 SNRPGP14-201ENST00000435400 219 ntBASIC5.15□□□□□ -1.59
CD44P16070 KRTAP19-11P-201ENST00000439851 104 ntBASIC5.15□□□□□ -1.59
CD44P16070 RN7SL817P-201ENST00000480777 288 ntBASIC5.15□□□□□ -1.59
CD44P16070 HSPE1P5-201ENST00000561489 272 ntBASIC5.15□□□□□ -1.59
CD44P16070 MIR548AE2-201ENST00000583456 67 ntBASIC5.15□□□□□ -1.59
CD44P16070 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.15□□□□□ -1.59
CD44P16070 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CD44P16070 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.15□□□□□ -1.59
CD44P16070 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
CD44P16070 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.15□□□□□ -1.59
CD44P16070 MAPK10-349ENST00000641767 3661 ntBASIC5.15□□□□□ -1.59
CD44P16070 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CD44P16070 RNU1-20P-201ENST00000363314 162 ntBASIC5.14□□□□□ -1.59
CD44P16070 RNA5SP507-201ENST00000363603 121 ntBASIC5.14□□□□□ -1.59
CD44P16070 RNU6-686P-201ENST00000364839 107 ntBASIC5.14□□□□□ -1.59
CD44P16070 MIR1236-201ENST00000408340 102 ntBASIC5.14□□□□□ -1.59
CD44P16070 RPL23AP27-201ENST00000415161 451 ntBASIC5.14□□□□□ -1.59
CD44P16070 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC5.14□□□□□ -1.59
CD44P16070 RPL7AP6-201ENST00000477943 801 ntBASIC5.14□□□□□ -1.59
CD44P16070 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC5.14□□□□□ -1.59
CD44P16070 HMGN2P6-201ENST00000551091 273 ntBASIC5.14□□□□□ -1.59
CD44P16070 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.14□□□□□ -1.59
CD44P16070 AC007656.2-201ENST00000624902 4547 ntBASIC5.14□□□□□ -1.59
CD44P16070 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC5.14□□□□□ -1.59
CD44P16070 AL136164.3-201ENST00000624429 3978 ntBASIC5.14□□□□□ -1.59
CD44P16070 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CD44P16070 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CD44P16070 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.13□□□□□ -1.59
CD44P16070 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms