Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 AC015813.6-201ENST00000624409 5808 ntBASIC3.98□□□□□ -1.77
HOXD8P13378 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HOXD8P13378 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HOXD8P13378 Y_RNA.127-201ENST00000363386 109 ntBASIC3.98□□□□□ -1.77
HOXD8P13378 RNU6-899P-201ENST00000363947 107 ntBASIC3.98□□□□□ -1.77
HOXD8P13378 RNU6-1048P-201ENST00000364054 107 ntBASIC3.98□□□□□ -1.77
HOXD8P13378 Y_RNA.353-201ENST00000365440 108 ntBASIC3.98□□□□□ -1.77
HOXD8P13378 MIR539-201ENST00000365690 78 ntBASIC3.98□□□□□ -1.77
HOXD8P13378 SNORD17-201ENST00000390930 237 ntBASIC3.98□□□□□ -1.77
HOXD8P13378 MTND4LP9-201ENST00000427694 174 ntBASIC3.98□□□□□ -1.77
HOXD8P13378 AC005326.1-201ENST00000429197 123 ntBASIC3.98□□□□□ -1.77
HOXD8P13378 AL121914.1-201ENST00000450188 156 ntBASIC3.98□□□□□ -1.77
HOXD8P13378 AL049873.1-201ENST00000480540 376 ntBASIC3.98□□□□□ -1.77
HOXD8P13378 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.98□□□□□ -1.77
HOXD8P13378 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.98□□□□□ -1.77
HOXD8P13378 RNA5SP309-201ENST00000516670 106 ntBASIC3.98□□□□□ -1.77
HOXD8P13378 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.98□□□□□ -1.77
HOXD8P13378 HIGD1AP1-201ENST00000550979 275 ntBASIC3.98□□□□□ -1.77
HOXD8P13378 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.98□□□□□ -1.77
HOXD8P13378 TCL6_2.1-201ENST00000615162 119 ntBASIC3.98□□□□□ -1.77
HOXD8P13378 AF117829.1-206ENST00000621883 3802 ntBASIC3.98□□□□□ -1.77
HOXD8P13378 MIR3651-201ENST00000630427 90 ntBASIC3.98□□□□□ -1.77
HOXD8P13378 AC068205.3-201ENST00000636385 468 ntBASIC3.98□□□□□ -1.77
HOXD8P13378 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HOXD8P13378 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.98□□□□□ -1.77
HOXD8P13378 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HOXD8P13378 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HOXD8P13378 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.98□□□□□ -1.77
HOXD8P13378 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HOXD8P13378 AL672296.1-201ENST00000427780 2158 ntBASIC3.97□□□□□ -1.77
HOXD8P13378 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXD8P13378 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXD8P13378 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.97□□□□□ -1.77
HOXD8P13378 MFSD8-233ENST00000641482 4860 ntBASIC3.97□□□□□ -1.77
HOXD8P13378 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.97□□□□□ -1.77
HOXD8P13378 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXD8P13378 RNU4-35P-201ENST00000362588 141 ntBASIC3.97□□□□□ -1.77
HOXD8P13378 U3.9-201ENST00000363823 204 ntBASIC3.97□□□□□ -1.77
HOXD8P13378 snoU2_19.4-201ENST00000364329 80 ntBASIC3.97□□□□□ -1.77
HOXD8P13378 SNORA18.2-201ENST00000383865 132 ntBASIC3.97□□□□□ -1.77
HOXD8P13378 SNORA72.4-201ENST00000384174 132 ntBASIC3.97□□□□□ -1.77
HOXD8P13378 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
HOXD8P13378 CYCSP48-201ENST00000417124 323 ntBASIC3.97□□□□□ -1.77
HOXD8P13378 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.97□□□□□ -1.77
HOXD8P13378 AL365496.1-201ENST00000426885 215 ntBASIC3.97□□□□□ -1.77
HOXD8P13378 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXD8P13378 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXD8P13378 AC245047.8-201ENST00000456455 284 ntBASIC3.97□□□□□ -1.77
HOXD8P13378 AC114982.1-201ENST00000469402 321 ntBASIC3.97□□□□□ -1.77
HOXD8P13378 RNU2-27P-201ENST00000516185 142 ntBASIC3.97□□□□□ -1.77
HOXD8P13378 RNU7-121P-201ENST00000516604 62 ntBASIC3.97□□□□□ -1.77
HOXD8P13378 AC109810.1-201ENST00000534066 224 ntBASIC3.97□□□□□ -1.77
HOXD8P13378 AL360157.1-201ENST00000565962 87 ntBASIC3.97□□□□□ -1.77
HOXD8P13378 RPS15AP11-201ENST00000594193 385 ntBASIC3.97□□□□□ -1.77
HOXD8P13378 YPEL5P2-201ENST00000605553 359 ntBASIC3.97□□□□□ -1.77
HOXD8P13378 AP003355.3-201ENST00000623465 114 ntBASIC3.97□□□□□ -1.77
HOXD8P13378 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXD8P13378 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXD8P13378 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.77
HOXD8P13378 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.96□□□□□ -1.77
HOXD8P13378 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
HOXD8P13378 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HOXD8P13378 SNORD114-19-201ENST00000363072 75 ntBASIC3.96□□□□□ -1.78
HOXD8P13378 RNU6-1205P-201ENST00000363625 106 ntBASIC3.96□□□□□ -1.78
HOXD8P13378 SNORD115-30-201ENST00000364117 82 ntBASIC3.96□□□□□ -1.78
HOXD8P13378 Y_RNA.341-201ENST00000365341 102 ntBASIC3.96□□□□□ -1.78
HOXD8P13378 RNU6-80P-201ENST00000384195 107 ntBASIC3.96□□□□□ -1.78
HOXD8P13378 RNU6-748P-201ENST00000384648 107 ntBASIC3.96□□□□□ -1.78
HOXD8P13378 MIR626-201ENST00000385032 94 ntBASIC3.96□□□□□ -1.78
HOXD8P13378 AL035461.1-201ENST00000421490 332 ntBASIC3.96□□□□□ -1.78
HOXD8P13378 TOMM22P2-201ENST00000430735 237 ntBASIC3.96□□□□□ -1.78
HOXD8P13378 AL135790.2-201ENST00000437701 267 ntBASIC3.96□□□□□ -1.78
HOXD8P13378 AC093663.1-201ENST00000497190 394 ntBASIC3.96□□□□□ -1.78
HOXD8P13378 RNU6-344P-201ENST00000516635 111 ntBASIC3.96□□□□□ -1.78
HOXD8P13378 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.96□□□□□ -1.78
HOXD8P13378 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.96□□□□□ -1.78
HOXD8P13378 EIF4A1P12-201ENST00000551910 141 ntBASIC3.96□□□□□ -1.78
HOXD8P13378 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.96□□□□□ -1.78
HOXD8P13378 PCGEM1.1-201ENST00000613431 131 ntBASIC3.96□□□□□ -1.78
HOXD8P13378 AL110115.1-201ENST00000614396 364 ntBASIC3.96□□□□□ -1.78
HOXD8P13378 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HOXD8P13378 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HOXD8P13378 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
HOXD8P13378 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXD8P13378 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HOXD8P13378 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.95□□□□□ -1.78
HOXD8P13378 Y_RNA.71-201ENST00000362892 104 ntBASIC3.95□□□□□ -1.78
HOXD8P13378 SNORD116-14-201ENST00000383894 92 ntBASIC3.95□□□□□ -1.78
HOXD8P13378 RNU6-969P-201ENST00000383900 105 ntBASIC3.95□□□□□ -1.78
HOXD8P13378 SNORD116-17-201ENST00000383929 92 ntBASIC3.95□□□□□ -1.78
HOXD8P13378 Y_RNA.420-201ENST00000384043 110 ntBASIC3.95□□□□□ -1.78
HOXD8P13378 SNORD116-15-201ENST00000384445 92 ntBASIC3.95□□□□□ -1.78
HOXD8P13378 SNORD116-19-201ENST00000384729 92 ntBASIC3.95□□□□□ -1.78
HOXD8P13378 SNORA48.2-201ENST00000390926 124 ntBASIC3.95□□□□□ -1.78
HOXD8P13378 RNU2-49P-201ENST00000410666 184 ntBASIC3.95□□□□□ -1.78
HOXD8P13378 RNA5SP120-201ENST00000410900 112 ntBASIC3.95□□□□□ -1.78
HOXD8P13378 Z75741.1-201ENST00000446793 314 ntBASIC3.95□□□□□ -1.78
HOXD8P13378 AC115115.1-201ENST00000449927 248 ntBASIC3.95□□□□□ -1.78
HOXD8P13378 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXD8P13378 AC146507.2-201ENST00000460608 476 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms