Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.65□□□□□ -1.99
HOXC6P09630 HMGN2P10-201ENST00000448085 265 ntBASIC2.65□□□□□ -1.99
HOXC6P09630 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.65□□□□□ -1.99
HOXC6P09630 MRPS35P2-201ENST00000508242 191 ntBASIC2.65□□□□□ -1.99
HOXC6P09630 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.65□□□□□ -1.99
HOXC6P09630 AC131281.1-201ENST00000522984 164 ntBASIC2.65□□□□□ -1.99
HOXC6P09630 AC040926.1-201ENST00000530195 238 ntBASIC2.65□□□□□ -1.99
HOXC6P09630 AL590705.4-201ENST00000532209 134 ntBASIC2.65□□□□□ -1.99
HOXC6P09630 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.65□□□□□ -1.99
HOXC6P09630 AC105137.2-201ENST00000569073 466 ntBASIC2.65□□□□□ -1.99
HOXC6P09630 AC060766.3-201ENST00000591442 263 ntBASIC2.65□□□□□ -1.99
HOXC6P09630 AC010205.1-201ENST00000616668 449 ntBASIC2.65□□□□□ -1.99
HOXC6P09630 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
HOXC6P09630 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
HOXC6P09630 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.64□□□□□ -1.99
HOXC6P09630 Y_RNA.26-201ENST00000362539 101 ntBASIC2.64□□□□□ -1.99
HOXC6P09630 Y_RNA.149-201ENST00000363558 117 ntBASIC2.64□□□□□ -1.99
HOXC6P09630 Y_RNA.176-201ENST00000363815 109 ntBASIC2.64□□□□□ -1.99
HOXC6P09630 Y_RNA.574-201ENST00000384766 95 ntBASIC2.64□□□□□ -1.99
HOXC6P09630 SNORA12.2-201ENST00000391040 156 ntBASIC2.64□□□□□ -1.99
HOXC6P09630 AP000275.1-201ENST00000411943 390 ntBASIC2.64□□□□□ -1.99
HOXC6P09630 AC007098.1-201ENST00000420122 367 ntBASIC2.64□□□□□ -1.99
HOXC6P09630 Z96811.1-201ENST00000445880 108 ntBASIC2.64□□□□□ -1.99
HOXC6P09630 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.64□□□□□ -1.99
HOXC6P09630 RPL30P1-201ENST00000488676 339 ntBASIC2.64□□□□□ -1.99
HOXC6P09630 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.64□□□□□ -1.99
HOXC6P09630 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.64□□□□□ -1.99
HOXC6P09630 RNU6-475P-201ENST00000516073 104 ntBASIC2.64□□□□□ -1.99
HOXC6P09630 Y_RNA.721-201ENST00000517207 102 ntBASIC2.64□□□□□ -1.99
HOXC6P09630 AC010928.2-201ENST00000588017 287 ntBASIC2.64□□□□□ -1.99
HOXC6P09630 U2.1-201ENST00000618978 145 ntBASIC2.64□□□□□ -1.99
HOXC6P09630 ADAM3A-203ENST00000461344 2157 ntBASIC2.64□□□□□ -1.99
HOXC6P09630 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
HOXC6P09630 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
HOXC6P09630 Y_RNA.222-201ENST00000364264 102 ntBASIC2.63□□□□□ -1.99
HOXC6P09630 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.63□□□□□ -1.99
HOXC6P09630 MIR544A-201ENST00000384855 91 ntBASIC2.63□□□□□ -1.99
HOXC6P09630 SNORA69.1-201ENST00000390904 137 ntBASIC2.63□□□□□ -1.99
HOXC6P09630 RNU6-1109P-201ENST00000391187 107 ntBASIC2.63□□□□□ -1.99
HOXC6P09630 RPL19P1-201ENST00000411635 428 ntBASIC2.63□□□□□ -1.99
HOXC6P09630 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.63□□□□□ -1.99
HOXC6P09630 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.63□□□□□ -1.99
HOXC6P09630 AC018634.1-201ENST00000437554 401 ntBASIC2.63□□□□□ -1.99
HOXC6P09630 AL714022.1-201ENST00000439897 151 ntBASIC2.63□□□□□ -1.99
HOXC6P09630 AC007969.2-201ENST00000441891 191 ntBASIC2.63□□□□□ -1.99
HOXC6P09630 DYNLT3P2-201ENST00000442517 295 ntBASIC2.63□□□□□ -1.99
HOXC6P09630 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
HOXC6P09630 MTCO3P8-201ENST00000453691 755 ntBASIC2.63□□□□□ -1.99
HOXC6P09630 U8.22-201ENST00000459141 133 ntBASIC2.63□□□□□ -1.99
HOXC6P09630 RNU7-87P-201ENST00000459343 62 ntBASIC2.63□□□□□ -1.99
HOXC6P09630 TOMM22P6-201ENST00000465035 409 ntBASIC2.63□□□□□ -1.99
HOXC6P09630 RPS27AP9-201ENST00000477681 438 ntBASIC2.63□□□□□ -1.99
HOXC6P09630 RN7SL499P-201ENST00000481141 276 ntBASIC2.63□□□□□ -1.99
HOXC6P09630 RPL30P10-201ENST00000488148 337 ntBASIC2.63□□□□□ -1.99
HOXC6P09630 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.63□□□□□ -1.99
HOXC6P09630 SNORA40.14-201ENST00000516543 86 ntBASIC2.63□□□□□ -1.99
HOXC6P09630 RNU7-4P-201ENST00000516961 62 ntBASIC2.63□□□□□ -1.99
HOXC6P09630 Y_RNA.715-201ENST00000517082 110 ntBASIC2.63□□□□□ -1.99
HOXC6P09630 SNORA31.23-201ENST00000517219 133 ntBASIC2.63□□□□□ -1.99
HOXC6P09630 AC144568.1-201ENST00000520139 137 ntBASIC2.63□□□□□ -1.99
HOXC6P09630 AC022616.4-201ENST00000522985 181 ntBASIC2.63□□□□□ -1.99
HOXC6P09630 CR383656.8-201ENST00000549046 145 ntBASIC2.63□□□□□ -1.99
HOXC6P09630 VN1R91P-201ENST00000594377 169 ntBASIC2.63□□□□□ -1.99
HOXC6P09630 AC006006.1-201ENST00000603082 144 ntBASIC2.63□□□□□ -1.99
HOXC6P09630 RPL23AP88-201ENST00000605759 454 ntBASIC2.63□□□□□ -1.99
HOXC6P09630 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.63□□□□□ -1.99
HOXC6P09630 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.62□□□□□ -1.99
HOXC6P09630 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.62□□□□□ -1.99
HOXC6P09630 RNA5SP139-201ENST00000364340 117 ntBASIC2.62□□□□□ -1.99
HOXC6P09630 RNU6-806P-201ENST00000365147 105 ntBASIC2.62□□□□□ -1.99
HOXC6P09630 Y_RNA.358-201ENST00000365491 99 ntBASIC2.62□□□□□ -1.99
HOXC6P09630 Y_RNA.452-201ENST00000384202 108 ntBASIC2.62□□□□□ -1.99
HOXC6P09630 RNU6-198P-201ENST00000384258 104 ntBASIC2.62□□□□□ -1.99
HOXC6P09630 SNORA51.11-201ENST00000384442 131 ntBASIC2.62□□□□□ -1.99
HOXC6P09630 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
HOXC6P09630 AL133475.1-201ENST00000404414 305 ntBASIC2.62□□□□□ -1.99
HOXC6P09630 MIR1252-201ENST00000408861 65 ntBASIC2.62□□□□□ -1.99
HOXC6P09630 Y_RNA.592-201ENST00000410274 109 ntBASIC2.62□□□□□ -1.99
HOXC6P09630 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.62□□□□□ -1.99
HOXC6P09630 UBBP3-201ENST00000445497 241 ntBASIC2.62□□□□□ -1.99
HOXC6P09630 RPL23AP75-201ENST00000491601 451 ntBASIC2.62□□□□□ -1.99
HOXC6P09630 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.62□□□□□ -1.99
HOXC6P09630 RNU6-397P-201ENST00000516226 104 ntBASIC2.62□□□□□ -1.99
HOXC6P09630 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.62□□□□□ -1.99
HOXC6P09630 HSPE1P20-201ENST00000538133 289 ntBASIC2.62□□□□□ -1.99
HOXC6P09630 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.62□□□□□ -1.99
HOXC6P09630 AC006199.1-201ENST00000548728 219 ntBASIC2.62□□□□□ -1.99
HOXC6P09630 NACAP3-201ENST00000552100 481 ntBASIC2.62□□□□□ -1.99
HOXC6P09630 VN1R107P-201ENST00000601784 209 ntBASIC2.62□□□□□ -1.99
HOXC6P09630 AC016727.2-201ENST00000603988 621 ntBASIC2.62□□□□□ -1.99
HOXC6P09630 MIR6873-201ENST00000622788 63 ntBASIC2.62□□□□□ -1.99
HOXC6P09630 AC110491.1-201ENST00000562191 2010 ntBASIC2.62□□□□□ -1.99
HOXC6P09630 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.62□□□□□ -1.99
HOXC6P09630 AP000560.1-201ENST00000624150 1937 ntBASIC2.62□□□□□ -1.99
HOXC6P09630 AC233981.2-201ENST00000611524 1614 ntBASIC2.61□□□□□ -1.99
HOXC6P09630 Y_RNA.214-201ENST00000364201 112 ntBASIC2.61□□□□□ -1.99
HOXC6P09630 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.61□□□□□ -1.99
HOXC6P09630 MIR190B-201ENST00000401119 79 ntBASIC2.61□□□□□ -1.99
HOXC6P09630 RNU6-1140P-201ENST00000410517 106 ntBASIC2.61□□□□□ -1.99
HOXC6P09630 RNA5SP492-201ENST00000411330 114 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms