Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.58□□□□□ -2.16
RETP07949 MIR4713-201ENST00000582691 75 ntBASIC1.58□□□□□ -2.16
RETP07949 RNU6-85P-201ENST00000605989 107 ntBASIC1.58□□□□□ -2.16
RETP07949 AC092807.2-201ENST00000609367 243 ntBASIC1.58□□□□□ -2.16
RETP07949 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.58□□□□□ -2.16
RETP07949 AC073869.6-201ENST00000640656 341 ntBASIC1.58□□□□□ -2.16
RETP07949 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.58□□□□□ -2.16
RETP07949 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
RETP07949 RNU6-451P-201ENST00000362921 107 ntBASIC1.57□□□□□ -2.16
RETP07949 RNU6-1210P-201ENST00000363775 107 ntBASIC1.57□□□□□ -2.16
RETP07949 Y_RNA.573-201ENST00000384763 105 ntBASIC1.57□□□□□ -2.16
RETP07949 MIR1262-201ENST00000408276 93 ntBASIC1.57□□□□□ -2.16
RETP07949 USP9YP18-201ENST00000425912 695 ntBASIC1.57□□□□□ -2.16
RETP07949 ERLEC1P1-201ENST00000433806 578 ntBASIC1.57□□□□□ -2.16
RETP07949 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.57□□□□□ -2.16
RETP07949 AC007969.2-201ENST00000441891 191 ntBASIC1.57□□□□□ -2.16
RETP07949 AC013470.1-201ENST00000453438 462 ntBASIC1.57□□□□□ -2.16
RETP07949 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.57□□□□□ -2.16
RETP07949 RNU6-1208P-201ENST00000459588 107 ntBASIC1.57□□□□□ -2.16
RETP07949 SNORA44.1-201ENST00000517031 108 ntBASIC1.57□□□□□ -2.16
RETP07949 MTND1P5-201ENST00000517906 940 ntBASIC1.57□□□□□ -2.16
RETP07949 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.57□□□□□ -2.16
RETP07949 AP005660.1-201ENST00000522972 293 ntBASIC1.57□□□□□ -2.16
RETP07949 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.57□□□□□ -2.16
RETP07949 COPS8P3-201ENST00000526024 482 ntBASIC1.57□□□□□ -2.16
RETP07949 AC026271.5-201ENST00000577873 130 ntBASIC1.57□□□□□ -2.16
RETP07949 AC010525.2-201ENST00000590920 195 ntBASIC1.57□□□□□ -2.16
RETP07949 AC080078.2-201ENST00000603766 501 ntBASIC1.57□□□□□ -2.16
RETP07949 SNRPGP17-201ENST00000603780 214 ntBASIC1.57□□□□□ -2.16
RETP07949 RNU6-89P-201ENST00000606519 100 ntBASIC1.57□□□□□ -2.16
RETP07949 AC090517.2-201ENST00000614966 680 ntBASIC1.57□□□□□ -2.16
RETP07949 AL359314.1-201ENST00000616913 261 ntBASIC1.57□□□□□ -2.16
RETP07949 AC091895.1-201ENST00000624494 256 ntBASIC1.57□□□□□ -2.16
RETP07949 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
RETP07949 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
RETP07949 RNU6-428P-201ENST00000362942 107 ntBASIC1.56□□□□□ -2.16
RETP07949 RNU6-105P-201ENST00000363909 104 ntBASIC1.56□□□□□ -2.16
RETP07949 RNU6-546P-201ENST00000383991 107 ntBASIC1.56□□□□□ -2.16
RETP07949 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
RETP07949 CBX3P9-201ENST00000402326 552 ntBASIC1.56□□□□□ -2.16
RETP07949 MIR1283-2-201ENST00000408621 87 ntBASIC1.56□□□□□ -2.16
RETP07949 Y_RNA.597-201ENST00000410463 100 ntBASIC1.56□□□□□ -2.16
RETP07949 AL117339.3-201ENST00000418733 162 ntBASIC1.56□□□□□ -2.16
RETP07949 SNRPEP10-201ENST00000420249 274 ntBASIC1.56□□□□□ -2.16
RETP07949 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.56□□□□□ -2.16
RETP07949 BX510359.4-201ENST00000423750 193 ntBASIC1.56□□□□□ -2.16
RETP07949 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.56□□□□□ -2.16
RETP07949 MTND4LP16-201ENST00000440828 295 ntBASIC1.56□□□□□ -2.16
RETP07949 AL031274.1-201ENST00000450334 232 ntBASIC1.56□□□□□ -2.16
RETP07949 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.56□□□□□ -2.16
RETP07949 snoU13.14-201ENST00000459372 104 ntBASIC1.56□□□□□ -2.16
RETP07949 RNU7-138P-201ENST00000459479 64 ntBASIC1.56□□□□□ -2.16
RETP07949 MIR449C-201ENST00000516047 92 ntBASIC1.56□□□□□ -2.16
RETP07949 RNU6-1069P-201ENST00000516612 133 ntBASIC1.56□□□□□ -2.16
RETP07949 SNORA31.24-201ENST00000517232 57 ntBASIC1.56□□□□□ -2.16
RETP07949 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.56□□□□□ -2.16
RETP07949 AC087854.1-201ENST00000519706 414 ntBASIC1.56□□□□□ -2.16
RETP07949 AL132822.1-201ENST00000617063 513 ntBASIC1.56□□□□□ -2.16
RETP07949 AL353770.2-201ENST00000620024 78 ntBASIC1.56□□□□□ -2.16
RETP07949 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.56□□□□□ -2.16
RETP07949 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
RETP07949 AC121333.1-201ENST00000567488 2709 ntBASIC1.55□□□□□ -2.16
RETP07949 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
RETP07949 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
RETP07949 Y_RNA.89-201ENST00000363031 102 ntBASIC1.55□□□□□ -2.16
RETP07949 Y_RNA.167-201ENST00000363735 109 ntBASIC1.55□□□□□ -2.16
RETP07949 RNU6-522P-201ENST00000364497 107 ntBASIC1.55□□□□□ -2.16
RETP07949 RNU6-336P-201ENST00000364891 107 ntBASIC1.55□□□□□ -2.16
RETP07949 RNU6-827P-201ENST00000365553 106 ntBASIC1.55□□□□□ -2.16
RETP07949 Y_RNA.453-201ENST00000384223 109 ntBASIC1.55□□□□□ -2.16
RETP07949 SNORD115-47-201ENST00000391226 86 ntBASIC1.55□□□□□ -2.16
RETP07949 EIF4E2P1-201ENST00000393781 255 ntBASIC1.55□□□□□ -2.16
RETP07949 MIR548F1-201ENST00000408667 84 ntBASIC1.55□□□□□ -2.16
RETP07949 RNU6-1245P-201ENST00000411130 106 ntBASIC1.55□□□□□ -2.16
RETP07949 FCF1P9-201ENST00000412546 282 ntBASIC1.55□□□□□ -2.16
RETP07949 MTND1P4-201ENST00000435196 415 ntBASIC1.55□□□□□ -2.16
RETP07949 UBE2V1P8-201ENST00000437166 265 ntBASIC1.55□□□□□ -2.16
RETP07949 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.55□□□□□ -2.16
RETP07949 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.55□□□□□ -2.16
RETP07949 PRELID3BP1-201ENST00000457142 540 ntBASIC1.55□□□□□ -2.16
RETP07949 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.55□□□□□ -2.16
RETP07949 SNORA19.2-201ENST00000516013 114 ntBASIC1.55□□□□□ -2.16
RETP07949 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.55□□□□□ -2.16
RETP07949 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.55□□□□□ -2.16
RETP07949 AL357078.3-201ENST00000607528 618 ntBASIC1.55□□□□□ -2.16
RETP07949 AC068944.2-201ENST00000610373 403 ntBASIC1.55□□□□□ -2.16
RETP07949 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.55□□□□□ -2.16
RETP07949 AL121757.2-201ENST00000611223 313 ntBASIC1.55□□□□□ -2.16
RETP07949 AC122108.2-201ENST00000611946 526 ntBASIC1.55□□□□□ -2.16
RETP07949 AL159153.1-201ENST00000619688 317 ntBASIC1.55□□□□□ -2.16
RETP07949 AC007792.1-201ENST00000623023 402 ntBASIC1.55□□□□□ -2.16
RETP07949 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.55□□□□□ -2.16
RETP07949 MIR1248-201ENST00000629190 106 ntBASIC1.55□□□□□ -2.16
RETP07949 MIR3688-2-201ENST00000636963 87 ntBASIC1.55□□□□□ -2.16
RETP07949 AC024614.3-201ENST00000637860 256 ntBASIC1.55□□□□□ -2.16
RETP07949 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.55□□□□□ -2.16
RETP07949 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
RETP07949 Y_RNA.256-201ENST00000364594 104 ntBASIC1.54□□□□□ -2.16
RETP07949 RNU6-877P-201ENST00000383868 107 ntBASIC1.54□□□□□ -2.16
RETP07949 Y_RNA.505-201ENST00000384489 102 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms