Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
TRIM3O75382 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
TRIM3O75382 RNA5SP501-201ENST00000410990 112 ntBASIC1.64□□□□□ -2.15
TRIM3O75382 UBE2V1P4-201ENST00000425374 344 ntBASIC1.64□□□□□ -2.15
TRIM3O75382 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.64□□□□□ -2.15
TRIM3O75382 USP9YP28-201ENST00000435142 589 ntBASIC1.64□□□□□ -2.15
TRIM3O75382 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.64□□□□□ -2.15
TRIM3O75382 SNRPEP8-201ENST00000442866 260 ntBASIC1.64□□□□□ -2.15
TRIM3O75382 FTH1P25-201ENST00000447665 469 ntBASIC1.64□□□□□ -2.15
TRIM3O75382 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.64□□□□□ -2.15
TRIM3O75382 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.64□□□□□ -2.15
TRIM3O75382 HMGN2P23-201ENST00000456759 269 ntBASIC1.64□□□□□ -2.15
TRIM3O75382 RNU7-14P-201ENST00000459331 62 ntBASIC1.64□□□□□ -2.15
TRIM3O75382 AC108210.2-201ENST00000503681 201 ntBASIC1.64□□□□□ -2.15
TRIM3O75382 AC005741.1-201ENST00000511094 432 ntBASIC1.64□□□□□ -2.15
TRIM3O75382 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.64□□□□□ -2.15
TRIM3O75382 RNU5F-4P-201ENST00000516581 114 ntBASIC1.64□□□□□ -2.15
TRIM3O75382 RNU6-548P-201ENST00000517083 115 ntBASIC1.64□□□□□ -2.15
TRIM3O75382 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.64□□□□□ -2.15
TRIM3O75382 MTND1P35-201ENST00000526739 508 ntBASIC1.64□□□□□ -2.15
TRIM3O75382 AC026371.1-201ENST00000551867 419 ntBASIC1.64□□□□□ -2.15
TRIM3O75382 AC090517.1-201ENST00000569307 266 ntBASIC1.64□□□□□ -2.15
TRIM3O75382 AC010928.2-201ENST00000588017 287 ntBASIC1.64□□□□□ -2.15
TRIM3O75382 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.64□□□□□ -2.15
TRIM3O75382 RMST_3.1-201ENST00000611651 109 ntBASIC1.64□□□□□ -2.15
TRIM3O75382 AC024614.3-201ENST00000637860 256 ntBASIC1.64□□□□□ -2.15
TRIM3O75382 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.64□□□□□ -2.15
TRIM3O75382 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.63□□□□□ -2.15
TRIM3O75382 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
TRIM3O75382 RNA5SP493-201ENST00000364115 91 ntBASIC1.63□□□□□ -2.15
TRIM3O75382 Y_RNA.256-201ENST00000364594 104 ntBASIC1.63□□□□□ -2.15
TRIM3O75382 RNU6-438P-201ENST00000365561 103 ntBASIC1.63□□□□□ -2.15
TRIM3O75382 RNU6-160P-201ENST00000384591 107 ntBASIC1.63□□□□□ -2.15
TRIM3O75382 RNU6-997P-201ENST00000384725 107 ntBASIC1.63□□□□□ -2.15
TRIM3O75382 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
TRIM3O75382 SNORA12.2-201ENST00000391040 156 ntBASIC1.63□□□□□ -2.15
TRIM3O75382 MTND3P21-201ENST00000433774 331 ntBASIC1.63□□□□□ -2.15
TRIM3O75382 AC007547.1-201ENST00000462177 490 ntBASIC1.63□□□□□ -2.15
TRIM3O75382 HMGN2P26-201ENST00000463169 339 ntBASIC1.63□□□□□ -2.15
TRIM3O75382 TOMM22P6-201ENST00000465035 409 ntBASIC1.63□□□□□ -2.15
TRIM3O75382 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.63□□□□□ -2.15
TRIM3O75382 RNU6-720P-201ENST00000516363 108 ntBASIC1.63□□□□□ -2.15
TRIM3O75382 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.63□□□□□ -2.15
TRIM3O75382 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.63□□□□□ -2.15
TRIM3O75382 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.63□□□□□ -2.15
TRIM3O75382 MIR4419B-201ENST00000577260 68 ntBASIC1.63□□□□□ -2.15
TRIM3O75382 AC100830.2-201ENST00000581636 240 ntBASIC1.63□□□□□ -2.15
TRIM3O75382 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.63□□□□□ -2.15
TRIM3O75382 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.63□□□□□ -2.15
TRIM3O75382 AC146944.4-201ENST00000602697 718 ntBASIC1.63□□□□□ -2.15
TRIM3O75382 MIR3976-201ENST00000606807 139 ntBASIC1.63□□□□□ -2.15
TRIM3O75382 AC084768.2-201ENST00000622736 221 ntBASIC1.63□□□□□ -2.15
TRIM3O75382 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.63□□□□□ -2.15
TRIM3O75382 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.63□□□□□ -2.15
TRIM3O75382 LINC02555-201ENST00000563933 1951 ntBASIC1.63□□□□□ -2.15
TRIM3O75382 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
TRIM3O75382 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.62□□□□□ -2.15
TRIM3O75382 Y_RNA.332-201ENST00000365271 113 ntBASIC1.62□□□□□ -2.15
TRIM3O75382 SNORA18.2-201ENST00000383865 132 ntBASIC1.62□□□□□ -2.15
TRIM3O75382 Y_RNA.402-201ENST00000383972 102 ntBASIC1.62□□□□□ -2.15
TRIM3O75382 NDUFA5P4-201ENST00000436704 385 ntBASIC1.62□□□□□ -2.15
TRIM3O75382 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.62□□□□□ -2.15
TRIM3O75382 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.62□□□□□ -2.15
TRIM3O75382 RNU7-187P-201ENST00000458985 68 ntBASIC1.62□□□□□ -2.15
TRIM3O75382 RNU1-98P-201ENST00000458992 160 ntBASIC1.62□□□□□ -2.15
TRIM3O75382 MTCO1P29-201ENST00000496868 288 ntBASIC1.62□□□□□ -2.15
TRIM3O75382 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.62□□□□□ -2.15
TRIM3O75382 RNU6-250P-201ENST00000516958 103 ntBASIC1.62□□□□□ -2.15
TRIM3O75382 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.62□□□□□ -2.15
TRIM3O75382 CYP2C61P-201ENST00000604072 290 ntBASIC1.62□□□□□ -2.15
TRIM3O75382 AC016925.2-201ENST00000605108 242 ntBASIC1.62□□□□□ -2.15
TRIM3O75382 AC009994.1-201ENST00000606889 253 ntBASIC1.62□□□□□ -2.15
TRIM3O75382 AC064807.4-201ENST00000607201 407 ntBASIC1.62□□□□□ -2.15
TRIM3O75382 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.62□□□□□ -2.15
TRIM3O75382 AC005520.5-201ENST00000613926 164 ntBASIC1.62□□□□□ -2.15
TRIM3O75382 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.62□□□□□ -2.15
TRIM3O75382 SNORD113-7-201ENST00000363762 77 ntBASIC1.61□□□□□ -2.15
TRIM3O75382 SNORD48-201ENST00000364953 64 ntBASIC1.61□□□□□ -2.15
TRIM3O75382 SNORA32.2-201ENST00000384049 122 ntBASIC1.61□□□□□ -2.15
TRIM3O75382 RNU6-933P-201ENST00000384424 107 ntBASIC1.61□□□□□ -2.15
TRIM3O75382 Y_RNA.516-201ENST00000384541 124 ntBASIC1.61□□□□□ -2.15
TRIM3O75382 SNORD116-4-201ENST00000384733 96 ntBASIC1.61□□□□□ -2.15
TRIM3O75382 MIR181A1-201ENST00000385026 110 ntBASIC1.61□□□□□ -2.15
TRIM3O75382 MIR549A-201ENST00000385268 96 ntBASIC1.61□□□□□ -2.15
TRIM3O75382 MIR934-201ENST00000401241 83 ntBASIC1.61□□□□□ -2.15
TRIM3O75382 RNA5SP494-201ENST00000410653 129 ntBASIC1.61□□□□□ -2.15
TRIM3O75382 AC123900.1-201ENST00000420390 96 ntBASIC1.61□□□□□ -2.15
TRIM3O75382 AL590632.1-201ENST00000424289 371 ntBASIC1.61□□□□□ -2.15
TRIM3O75382 AC139712.2-201ENST00000424302 339 ntBASIC1.61□□□□□ -2.15
TRIM3O75382 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.61□□□□□ -2.15
TRIM3O75382 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.61□□□□□ -2.15
TRIM3O75382 RNU6-970P-201ENST00000516312 107 ntBASIC1.61□□□□□ -2.15
TRIM3O75382 RNVU1-2-201ENST00000516326 135 ntBASIC1.61□□□□□ -2.15
TRIM3O75382 AC109635.3-201ENST00000529536 185 ntBASIC1.61□□□□□ -2.15
TRIM3O75382 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.61□□□□□ -2.15
TRIM3O75382 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.61□□□□□ -2.15
TRIM3O75382 MIR3169-201ENST00000578032 83 ntBASIC1.61□□□□□ -2.15
TRIM3O75382 MIR4255-201ENST00000579351 72 ntBASIC1.61□□□□□ -2.15
TRIM3O75382 CPDP1-201ENST00000579660 283 ntBASIC1.61□□□□□ -2.15
TRIM3O75382 MIR3683-201ENST00000580847 82 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms