Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
RNF40O75150 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.66□□□□□ -1.66
RNF40O75150 Y_RNA.49-201ENST00000362714 112 ntBASIC4.66□□□□□ -1.66
RNF40O75150 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.66□□□□□ -1.66
RNF40O75150 Y_RNA.220-201ENST00000364244 109 ntBASIC4.66□□□□□ -1.66
RNF40O75150 AL133475.1-201ENST00000404414 305 ntBASIC4.66□□□□□ -1.66
RNF40O75150 RNA5SP306-201ENST00000411087 107 ntBASIC4.66□□□□□ -1.66
RNF40O75150 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.66□□□□□ -1.66
RNF40O75150 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC4.66□□□□□ -1.66
RNF40O75150 RN7SL810P-201ENST00000493031 276 ntBASIC4.66□□□□□ -1.66
RNF40O75150 AC083906.5-201ENST00000503722 328 ntBASIC4.66□□□□□ -1.66
RNF40O75150 RNU6-928P-201ENST00000516876 104 ntBASIC4.66□□□□□ -1.66
RNF40O75150 MRPL49P2-201ENST00000521066 465 ntBASIC4.66□□□□□ -1.66
RNF40O75150 CYCSP29-201ENST00000533731 318 ntBASIC4.66□□□□□ -1.66
RNF40O75150 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
RNF40O75150 AC091152.3-201ENST00000604227 325 ntBASIC4.66□□□□□ -1.66
RNF40O75150 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RNF40O75150 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
RNF40O75150 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
RNF40O75150 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.66□□□□□ -1.66
RNF40O75150 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RNF40O75150 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.66□□□□□ -1.66
RNF40O75150 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
RNF40O75150 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
RNF40O75150 RNU6-271P-201ENST00000363858 105 ntBASIC4.65□□□□□ -1.67
RNF40O75150 RNU6-1305P-201ENST00000364353 104 ntBASIC4.65□□□□□ -1.67
RNF40O75150 RNU6-748P-201ENST00000384648 107 ntBASIC4.65□□□□□ -1.67
RNF40O75150 MIR590-201ENST00000385008 97 ntBASIC4.65□□□□□ -1.67
RNF40O75150 RPS12P10-201ENST00000427031 377 ntBASIC4.65□□□□□ -1.67
RNF40O75150 AC010531.2-201ENST00000465012 153 ntBASIC4.65□□□□□ -1.67
RNF40O75150 RNU6-109P-201ENST00000516364 107 ntBASIC4.65□□□□□ -1.67
RNF40O75150 RNU6-184P-201ENST00000516514 107 ntBASIC4.65□□□□□ -1.67
RNF40O75150 AP003730.1-201ENST00000524605 285 ntBASIC4.65□□□□□ -1.67
RNF40O75150 Y_RNA.818-201ENST00000618813 71 ntBASIC4.65□□□□□ -1.67
RNF40O75150 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RNF40O75150 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RNF40O75150 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.67
RNF40O75150 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC4.65□□□□□ -1.67
RNF40O75150 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RNF40O75150 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RNF40O75150 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RNF40O75150 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.65□□□□□ -1.67
RNF40O75150 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
RNF40O75150 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
RNF40O75150 RNU6-117P-201ENST00000365415 107 ntBASIC4.64□□□□□ -1.67
RNF40O75150 SNORA37-201ENST00000384504 129 ntBASIC4.64□□□□□ -1.67
RNF40O75150 MIR562-201ENST00000384894 95 ntBASIC4.64□□□□□ -1.67
RNF40O75150 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.64□□□□□ -1.67
RNF40O75150 RN7SL98P-201ENST00000462271 300 ntBASIC4.64□□□□□ -1.67
RNF40O75150 RNA5SP395-201ENST00000516567 118 ntBASIC4.64□□□□□ -1.67
RNF40O75150 AC015720.1-201ENST00000565251 277 ntBASIC4.64□□□□□ -1.67
RNF40O75150 AL929325.1-201ENST00000603096 117 ntBASIC4.64□□□□□ -1.67
RNF40O75150 5S_rRNA.13-201ENST00000622298 123 ntBASIC4.64□□□□□ -1.67
RNF40O75150 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.64□□□□□ -1.67
RNF40O75150 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
RNF40O75150 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
RNF40O75150 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RNF40O75150 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RNF40O75150 SNORA51.4-201ENST00000364993 124 ntBASIC4.63□□□□□ -1.67
RNF40O75150 RNU6-1138P-201ENST00000365359 106 ntBASIC4.63□□□□□ -1.67
RNF40O75150 SNORA26-201ENST00000391286 122 ntBASIC4.63□□□□□ -1.67
RNF40O75150 SDHCP2-201ENST00000398565 501 ntBASIC4.63□□□□□ -1.67
RNF40O75150 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.63□□□□□ -1.67
RNF40O75150 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC4.63□□□□□ -1.67
RNF40O75150 PHBP16-201ENST00000446318 950 ntBASIC4.63□□□□□ -1.67
RNF40O75150 AC245102.2-201ENST00000448956 180 ntBASIC4.63□□□□□ -1.67
RNF40O75150 AC091153.1-201ENST00000466297 402 ntBASIC4.63□□□□□ -1.67
RNF40O75150 AC107626.1-201ENST00000471084 183 ntBASIC4.63□□□□□ -1.67
RNF40O75150 AC105137.1-201ENST00000484355 562 ntBASIC4.63□□□□□ -1.67
RNF40O75150 RNU6-65P-201ENST00000516332 98 ntBASIC4.63□□□□□ -1.67
RNF40O75150 RNU6-113P-201ENST00000516653 101 ntBASIC4.63□□□□□ -1.67
RNF40O75150 RNU6-63P-201ENST00000516690 95 ntBASIC4.63□□□□□ -1.67
RNF40O75150 MIR2116-201ENST00000517221 80 ntBASIC4.63□□□□□ -1.67
RNF40O75150 AC011602.1-201ENST00000546484 331 ntBASIC4.63□□□□□ -1.67
RNF40O75150 MIR432-201ENST00000606207 94 ntBASIC4.63□□□□□ -1.67
RNF40O75150 MALAT1.1-201ENST00000618249 95 ntBASIC4.63□□□□□ -1.67
RNF40O75150 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RNF40O75150 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RNF40O75150 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RNF40O75150 AC004944.1-201ENST00000517807 3059 ntBASIC4.62□□□□□ -1.67
RNF40O75150 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RNF40O75150 RNA5SP502-201ENST00000362694 119 ntBASIC4.62□□□□□ -1.67
RNF40O75150 SNORA12-201ENST00000391162 147 ntBASIC4.62□□□□□ -1.67
RNF40O75150 RPS26P8-201ENST00000393490 348 ntBASIC4.62□□□□□ -1.67
RNF40O75150 MTATP8P2-201ENST00000435212 202 ntBASIC4.62□□□□□ -1.67
RNF40O75150 SNORD65B-201ENST00000459126 73 ntBASIC4.62□□□□□ -1.67
RNF40O75150 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC4.62□□□□□ -1.67
RNF40O75150 AC012493.2-201ENST00000595083 291 ntBASIC4.62□□□□□ -1.67
RNF40O75150 MIR3199-2-201ENST00000636243 86 ntBASIC4.62□□□□□ -1.67
RNF40O75150 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.62□□□□□ -1.67
RNF40O75150 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
RNF40O75150 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
RNF40O75150 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.61□□□□□ -1.67
RNF40O75150 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
RNF40O75150 Y_RNA.111-201ENST00000363248 100 ntBASIC4.61□□□□□ -1.67
RNF40O75150 SNORA63.5-201ENST00000363548 123 ntBASIC4.61□□□□□ -1.67
RNF40O75150 RNU6-1210P-201ENST00000363775 107 ntBASIC4.61□□□□□ -1.67
RNF40O75150 AL590004.2-201ENST00000404787 371 ntBASIC4.61□□□□□ -1.67
RNF40O75150 SNORA19.1-201ENST00000410656 129 ntBASIC4.61□□□□□ -1.67
RNF40O75150 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms