Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 RNA5SP247-201ENST00000411181 105 ntBASIC2.3□□□□□ -2.04
CACNA1FO60840 MRPS18CP6-201ENST00000423587 223 ntBASIC2.3□□□□□ -2.04
CACNA1FO60840 MTND3P9-201ENST00000429526 346 ntBASIC2.3□□□□□ -2.04
CACNA1FO60840 AL731563.1-201ENST00000442202 214 ntBASIC2.3□□□□□ -2.04
CACNA1FO60840 MTCO2P24-201ENST00000515611 426 ntBASIC2.3□□□□□ -2.04
CACNA1FO60840 AC010186.2-204ENST00000537668 439 ntBASIC2.3□□□□□ -2.04
CACNA1FO60840 AC109446.1-201ENST00000566172 220 ntBASIC2.3□□□□□ -2.04
CACNA1FO60840 AC004584.2-201ENST00000570407 410 ntBASIC2.3□□□□□ -2.04
CACNA1FO60840 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.3□□□□□ -2.04
CACNA1FO60840 AC090132.2-201ENST00000615881 347 ntBASIC2.3□□□□□ -2.04
CACNA1FO60840 RNU6-512P-201ENST00000364438 103 ntBASIC2.29□□□□□ -2.04
CACNA1FO60840 Y_RNA.364-201ENST00000365532 101 ntBASIC2.29□□□□□ -2.04
CACNA1FO60840 SNORA75.6-201ENST00000391318 127 ntBASIC2.29□□□□□ -2.04
CACNA1FO60840 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CACNA1FO60840 RNU2-33P-201ENST00000410344 192 ntBASIC2.29□□□□□ -2.04
CACNA1FO60840 CBX3P6-201ENST00000430257 527 ntBASIC2.29□□□□□ -2.04
CACNA1FO60840 SNRPEP9-201ENST00000436794 238 ntBASIC2.29□□□□□ -2.04
CACNA1FO60840 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CACNA1FO60840 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.29□□□□□ -2.04
CACNA1FO60840 SEM1P1-201ENST00000506694 209 ntBASIC2.29□□□□□ -2.04
CACNA1FO60840 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.29□□□□□ -2.04
CACNA1FO60840 RNA5SP291-201ENST00000517222 105 ntBASIC2.29□□□□□ -2.04
CACNA1FO60840 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CACNA1FO60840 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.29□□□□□ -2.04
CACNA1FO60840 AL117187.1-201ENST00000555482 181 ntBASIC2.29□□□□□ -2.04
CACNA1FO60840 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.29□□□□□ -2.04
CACNA1FO60840 MIR4419B-201ENST00000577260 68 ntBASIC2.29□□□□□ -2.04
CACNA1FO60840 AC010205.1-201ENST00000616668 449 ntBASIC2.29□□□□□ -2.04
CACNA1FO60840 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.29□□□□□ -2.04
CACNA1FO60840 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.29□□□□□ -2.04
CACNA1FO60840 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CACNA1FO60840 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
CACNA1FO60840 CDC27P3-201ENST00000635418 1910 ntBASIC2.29□□□□□ -2.04
CACNA1FO60840 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CACNA1FO60840 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
CACNA1FO60840 RNU6-898P-201ENST00000365627 104 ntBASIC2.29□□□□□ -2.04
CACNA1FO60840 SNORA69.1-201ENST00000390904 137 ntBASIC2.29□□□□□ -2.04
CACNA1FO60840 SNORA67.5-201ENST00000391036 107 ntBASIC2.29□□□□□ -2.04
CACNA1FO60840 AL365496.1-201ENST00000426885 215 ntBASIC2.29□□□□□ -2.04
CACNA1FO60840 IPO7P1-201ENST00000442031 636 ntBASIC2.29□□□□□ -2.04
CACNA1FO60840 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.29□□□□□ -2.04
CACNA1FO60840 snoU13.28-201ENST00000459235 104 ntBASIC2.29□□□□□ -2.04
CACNA1FO60840 Y_RNA.715-201ENST00000517082 110 ntBASIC2.29□□□□□ -2.04
CACNA1FO60840 CASP1P1-201ENST00000526345 212 ntBASIC2.29□□□□□ -2.04
CACNA1FO60840 HMGB1P14-201ENST00000557424 591 ntBASIC2.29□□□□□ -2.04
CACNA1FO60840 AC008269.2-201ENST00000561915 1105 ntBASIC2.29□□□□□ -2.04
CACNA1FO60840 MIR4273-201ENST00000582824 84 ntBASIC2.29□□□□□ -2.04
CACNA1FO60840 AC008121.1-201ENST00000603244 268 ntBASIC2.29□□□□□ -2.04
CACNA1FO60840 AC092447.9-201ENST00000603395 144 ntBASIC2.29□□□□□ -2.04
CACNA1FO60840 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.29□□□□□ -2.04
CACNA1FO60840 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.29□□□□□ -2.04
CACNA1FO60840 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.29□□□□□ -2.04
CACNA1FO60840 RNU6-942P-201ENST00000363002 107 ntBASIC2.28□□□□□ -2.04
CACNA1FO60840 Y_RNA.153-201ENST00000363615 91 ntBASIC2.28□□□□□ -2.04
CACNA1FO60840 RNY1P14-201ENST00000384426 108 ntBASIC2.28□□□□□ -2.04
CACNA1FO60840 RNU6-306P-201ENST00000384617 107 ntBASIC2.28□□□□□ -2.04
CACNA1FO60840 MIR1290-201ENST00000408735 78 ntBASIC2.28□□□□□ -2.04
CACNA1FO60840 RNU6-1245P-201ENST00000411130 106 ntBASIC2.28□□□□□ -2.04
CACNA1FO60840 HMGB3P2-201ENST00000411913 584 ntBASIC2.28□□□□□ -2.04
CACNA1FO60840 AC027124.2-201ENST00000428249 105 ntBASIC2.28□□□□□ -2.04
CACNA1FO60840 MTCO3P29-201ENST00000432119 779 ntBASIC2.28□□□□□ -2.04
CACNA1FO60840 AC108059.2-201ENST00000434626 151 ntBASIC2.28□□□□□ -2.04
CACNA1FO60840 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.28□□□□□ -2.04
CACNA1FO60840 AL031659.1-201ENST00000447075 539 ntBASIC2.28□□□□□ -2.04
CACNA1FO60840 FABP5P15-201ENST00000453566 214 ntBASIC2.28□□□□□ -2.04
CACNA1FO60840 AL353752.1-201ENST00000454946 260 ntBASIC2.28□□□□□ -2.04
CACNA1FO60840 AC022447.4-201ENST00000504053 364 ntBASIC2.28□□□□□ -2.04
CACNA1FO60840 CBX3P4-201ENST00000538909 354 ntBASIC2.28□□□□□ -2.04
CACNA1FO60840 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.28□□□□□ -2.04
CACNA1FO60840 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.28□□□□□ -2.04
CACNA1FO60840 MIR3616-201ENST00000584070 92 ntBASIC2.28□□□□□ -2.04
CACNA1FO60840 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.28□□□□□ -2.04
CACNA1FO60840 AL161798.1-201ENST00000604630 131 ntBASIC2.28□□□□□ -2.04
CACNA1FO60840 FTX_3.1-201ENST00000610451 147 ntBASIC2.28□□□□□ -2.04
CACNA1FO60840 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.28□□□□□ -2.04
CACNA1FO60840 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CACNA1FO60840 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CACNA1FO60840 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.28□□□□□ -2.05
CACNA1FO60840 AC135776.4-201ENST00000624300 1904 ntBASIC2.27□□□□□ -2.05
CACNA1FO60840 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.27□□□□□ -2.05
CACNA1FO60840 RNU6-428P-201ENST00000362942 107 ntBASIC2.27□□□□□ -2.05
CACNA1FO60840 RNU1-109P-201ENST00000383960 147 ntBASIC2.27□□□□□ -2.05
CACNA1FO60840 RNU6-505P-201ENST00000384427 107 ntBASIC2.27□□□□□ -2.05
CACNA1FO60840 SNORA51.11-201ENST00000384442 131 ntBASIC2.27□□□□□ -2.05
CACNA1FO60840 SNORD116-20-201ENST00000384529 92 ntBASIC2.27□□□□□ -2.05
CACNA1FO60840 MIR568-201ENST00000385036 95 ntBASIC2.27□□□□□ -2.05
CACNA1FO60840 MIR301A-201ENST00000385261 86 ntBASIC2.27□□□□□ -2.05
CACNA1FO60840 MT-TG-201ENST00000387429 68 ntBASIC2.27□□□□□ -2.05
CACNA1FO60840 RNU6-1140P-201ENST00000410517 106 ntBASIC2.27□□□□□ -2.05
CACNA1FO60840 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.27□□□□□ -2.05
CACNA1FO60840 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.27□□□□□ -2.05
CACNA1FO60840 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.27□□□□□ -2.05
CACNA1FO60840 USP9YP16-201ENST00000430287 407 ntBASIC2.27□□□□□ -2.05
CACNA1FO60840 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.27□□□□□ -2.05
CACNA1FO60840 AC124916.1-201ENST00000444020 547 ntBASIC2.27□□□□□ -2.05
CACNA1FO60840 NDUFB1P2-201ENST00000449477 176 ntBASIC2.27□□□□□ -2.05
CACNA1FO60840 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CACNA1FO60840 USP9YP23-201ENST00000455085 407 ntBASIC2.27□□□□□ -2.05
CACNA1FO60840 RNU6-548P-201ENST00000517083 115 ntBASIC2.27□□□□□ -2.05
CACNA1FO60840 AC040926.1-201ENST00000530195 238 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms