Protein–RNA interactions for Protein: O60749

SNX2, Sorting nexin-2, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2O60749 snoU2_19.1-201ENST00000362361 80 ntBASIC2.81□□□□□ -1.96
SNX2O60749 RNU4-15P-201ENST00000362613 141 ntBASIC2.81□□□□□ -1.96
SNX2O60749 Y_RNA.39-201ENST00000362620 98 ntBASIC2.81□□□□□ -1.96
SNX2O60749 RNU1-72P-201ENST00000362976 153 ntBASIC2.81□□□□□ -1.96
SNX2O60749 Y_RNA.158-201ENST00000363651 101 ntBASIC2.81□□□□□ -1.96
SNX2O60749 RNU6-1210P-201ENST00000363775 107 ntBASIC2.81□□□□□ -1.96
SNX2O60749 SNORD115-32-201ENST00000364079 82 ntBASIC2.81□□□□□ -1.96
SNX2O60749 Y_RNA.422-201ENST00000384054 114 ntBASIC2.81□□□□□ -1.96
SNX2O60749 RNU1-138P-201ENST00000384093 164 ntBASIC2.81□□□□□ -1.96
SNX2O60749 MIR181B1-201ENST00000385240 110 ntBASIC2.81□□□□□ -1.96
SNX2O60749 MIR549A-201ENST00000385268 96 ntBASIC2.81□□□□□ -1.96
SNX2O60749 SNORA69.1-201ENST00000390904 137 ntBASIC2.81□□□□□ -1.96
SNX2O60749 Y_RNA.592-201ENST00000410274 109 ntBASIC2.81□□□□□ -1.96
SNX2O60749 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.81□□□□□ -1.96
SNX2O60749 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.81□□□□□ -1.96
SNX2O60749 AC087499.2-201ENST00000432861 149 ntBASIC2.81□□□□□ -1.96
SNX2O60749 RPS29P6-201ENST00000438196 145 ntBASIC2.81□□□□□ -1.96
SNX2O60749 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.81□□□□□ -1.96
SNX2O60749 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.81□□□□□ -1.96
SNX2O60749 GTF3AP2-201ENST00000557014 266 ntBASIC2.81□□□□□ -1.96
SNX2O60749 MIR5194-201ENST00000582634 120 ntBASIC2.81□□□□□ -1.96
SNX2O60749 MIR5188-201ENST00000583467 113 ntBASIC2.81□□□□□ -1.96
SNX2O60749 AC010297.1-201ENST00000623948 149 ntBASIC2.81□□□□□ -1.96
SNX2O60749 AC005592.1-201ENST00000566527 1640 ntBASIC2.81□□□□□ -1.96
SNX2O60749 MTND5P16-201ENST00000460269 1703 ntBASIC2.81□□□□□ -1.96
SNX2O60749 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
SNX2O60749 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.8□□□□□ -1.96
SNX2O60749 RNU6-708P-201ENST00000384217 107 ntBASIC2.8□□□□□ -1.96
SNX2O60749 Y_RNA.527-201ENST00000384573 102 ntBASIC2.8□□□□□ -1.96
SNX2O60749 Y_RNA.557-201ENST00000384680 107 ntBASIC2.8□□□□□ -1.96
SNX2O60749 MIR95-201ENST00000385072 81 ntBASIC2.8□□□□□ -1.96
SNX2O60749 MIR524-201ENST00000385242 87 ntBASIC2.8□□□□□ -1.96
SNX2O60749 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
SNX2O60749 AL445305.1-201ENST00000432577 575 ntBASIC2.8□□□□□ -1.96
SNX2O60749 RPS3P1-201ENST00000456781 192 ntBASIC2.8□□□□□ -1.96
SNX2O60749 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.8□□□□□ -1.96
SNX2O60749 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.8□□□□□ -1.96
SNX2O60749 AC144568.1-201ENST00000520139 137 ntBASIC2.8□□□□□ -1.96
SNX2O60749 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.8□□□□□ -1.96
SNX2O60749 AC006600.1-201ENST00000572529 153 ntBASIC2.8□□□□□ -1.96
SNX2O60749 MIR3136-201ENST00000583498 78 ntBASIC2.8□□□□□ -1.96
SNX2O60749 AC023043.3-201ENST00000593113 385 ntBASIC2.8□□□□□ -1.96
SNX2O60749 RPL30P11-203ENST00000598995 310 ntBASIC2.8□□□□□ -1.96
SNX2O60749 AL049779.4-201ENST00000604500 156 ntBASIC2.8□□□□□ -1.96
SNX2O60749 AL132822.1-201ENST00000617063 513 ntBASIC2.8□□□□□ -1.96
SNX2O60749 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SNX2O60749 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SNX2O60749 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.8□□□□□ -1.96
SNX2O60749 SNORA67.1-201ENST00000364749 141 ntBASIC2.79□□□□□ -1.96
SNX2O60749 RNU6-378P-201ENST00000384324 107 ntBASIC2.79□□□□□ -1.96
SNX2O60749 MIR153-2-201ENST00000385225 87 ntBASIC2.79□□□□□ -1.96
SNX2O60749 snosnR66.1-201ENST00000391095 99 ntBASIC2.79□□□□□ -1.96
SNX2O60749 CBX3P9-201ENST00000402326 552 ntBASIC2.79□□□□□ -1.96
SNX2O60749 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.79□□□□□ -1.96
SNX2O60749 AC112492.4-201ENST00000456549 352 ntBASIC2.79□□□□□ -1.96
SNX2O60749 AP000870.1-201ENST00000472927 406 ntBASIC2.79□□□□□ -1.96
SNX2O60749 HMGN1P10-201ENST00000474557 553 ntBASIC2.79□□□□□ -1.96
SNX2O60749 SNORA9.3-201ENST00000516383 129 ntBASIC2.79□□□□□ -1.96
SNX2O60749 AC027288.2-201ENST00000553028 243 ntBASIC2.79□□□□□ -1.96
SNX2O60749 HSBP1P1-201ENST00000555205 166 ntBASIC2.79□□□□□ -1.96
SNX2O60749 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.79□□□□□ -1.96
SNX2O60749 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.79□□□□□ -1.96
SNX2O60749 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.79□□□□□ -1.96
SNX2O60749 AC005034.5-201ENST00000604219 466 ntBASIC2.79□□□□□ -1.96
SNX2O60749 PART1_1.1-201ENST00000611761 217 ntBASIC2.79□□□□□ -1.96
SNX2O60749 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.79□□□□□ -1.96
SNX2O60749 U2.1-201ENST00000618978 145 ntBASIC2.79□□□□□ -1.96
SNX2O60749 AL162373.1-201ENST00000620433 407 ntBASIC2.79□□□□□ -1.96
SNX2O60749 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SNX2O60749 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.79□□□□□ -1.96
SNX2O60749 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SNX2O60749 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SNX2O60749 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SNX2O60749 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SNX2O60749 RNU6-450P-201ENST00000364654 107 ntBASIC2.78□□□□□ -1.96
SNX2O60749 MIR561-201ENST00000385216 97 ntBASIC2.78□□□□□ -1.96
SNX2O60749 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.78□□□□□ -1.96
SNX2O60749 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.78□□□□□ -1.96
SNX2O60749 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.78□□□□□ -1.96
SNX2O60749 AC105272.1-201ENST00000438604 198 ntBASIC2.78□□□□□ -1.96
SNX2O60749 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.78□□□□□ -1.96
SNX2O60749 AC090515.1-201ENST00000465295 476 ntBASIC2.78□□□□□ -1.96
SNX2O60749 ANXA2P1-201ENST00000505539 926 ntBASIC2.78□□□□□ -1.96
SNX2O60749 SNORA48.11-201ENST00000517015 89 ntBASIC2.78□□□□□ -1.96
SNX2O60749 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.78□□□□□ -1.96
SNX2O60749 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SNX2O60749 AC023442.1-201ENST00000531247 422 ntBASIC2.78□□□□□ -1.96
SNX2O60749 GNAI2P1-201ENST00000541815 315 ntBASIC2.78□□□□□ -1.96
SNX2O60749 UBL5P4-201ENST00000562584 236 ntBASIC2.78□□□□□ -1.96
SNX2O60749 CYP4A27P-201ENST00000567218 190 ntBASIC2.78□□□□□ -1.96
SNX2O60749 MIR3923-201ENST00000579521 83 ntBASIC2.78□□□□□ -1.96
SNX2O60749 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.78□□□□□ -1.96
SNX2O60749 ELOCP29-201ENST00000588193 334 ntBASIC2.78□□□□□ -1.96
SNX2O60749 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.78□□□□□ -1.96
SNX2O60749 AL713866.2-201ENST00000603579 219 ntBASIC2.78□□□□□ -1.96
SNX2O60749 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.78□□□□□ -1.96
SNX2O60749 AC096644.4-201ENST00000563417 2912 ntBASIC2.78□□□□□ -1.96
SNX2O60749 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SNX2O60749 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
SNX2O60749 RNU6-1093P-201ENST00000391194 107 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms