Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 MIR4672-201ENST00000583126 81 ntBASIC2.72□□□□□ -1.97
MBD3L4A6NDZ8 AC005034.5-201ENST00000604219 466 ntBASIC2.72□□□□□ -1.97
MBD3L4A6NDZ8 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.72□□□□□ -1.97
MBD3L4A6NDZ8 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.72□□□□□ -1.97
MBD3L4A6NDZ8 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
MBD3L4A6NDZ8 AL035425.3-201ENST00000564206 4996 ntBASIC2.71□□□□□ -1.97
MBD3L4A6NDZ8 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
MBD3L4A6NDZ8 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.71□□□□□ -1.98
MBD3L4A6NDZ8 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
MBD3L4A6NDZ8 RNU6-727P-201ENST00000363592 107 ntBASIC2.71□□□□□ -1.98
MBD3L4A6NDZ8 Y_RNA.179-201ENST00000363844 90 ntBASIC2.71□□□□□ -1.98
MBD3L4A6NDZ8 RNU6-26P-201ENST00000383985 107 ntBASIC2.71□□□□□ -1.98
MBD3L4A6NDZ8 SNORA18.3-201ENST00000384122 132 ntBASIC2.71□□□□□ -1.98
MBD3L4A6NDZ8 RNU6-793P-201ENST00000384233 104 ntBASIC2.71□□□□□ -1.98
MBD3L4A6NDZ8 RNU6-318P-201ENST00000384283 103 ntBASIC2.71□□□□□ -1.98
MBD3L4A6NDZ8 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
MBD3L4A6NDZ8 RNU2-32P-201ENST00000411193 191 ntBASIC2.71□□□□□ -1.98
MBD3L4A6NDZ8 BX679664.1-201ENST00000434429 253 ntBASIC2.71□□□□□ -1.98
MBD3L4A6NDZ8 AC010095.1-201ENST00000443543 144 ntBASIC2.71□□□□□ -1.98
MBD3L4A6NDZ8 AC104389.3-201ENST00000445629 235 ntBASIC2.71□□□□□ -1.98
MBD3L4A6NDZ8 MTND5P22-201ENST00000458380 195 ntBASIC2.71□□□□□ -1.98
MBD3L4A6NDZ8 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.71□□□□□ -1.98
MBD3L4A6NDZ8 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.71□□□□□ -1.98
MBD3L4A6NDZ8 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.71□□□□□ -1.98
MBD3L4A6NDZ8 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.71□□□□□ -1.98
MBD3L4A6NDZ8 RNU2-44P-201ENST00000516795 194 ntBASIC2.71□□□□□ -1.98
MBD3L4A6NDZ8 SNORA48.11-201ENST00000517015 89 ntBASIC2.71□□□□□ -1.98
MBD3L4A6NDZ8 Y_RNA.715-201ENST00000517082 110 ntBASIC2.71□□□□□ -1.98
MBD3L4A6NDZ8 NDUFB9P3-201ENST00000521269 501 ntBASIC2.71□□□□□ -1.98
MBD3L4A6NDZ8 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.71□□□□□ -1.98
MBD3L4A6NDZ8 AC136443.5-201ENST00000603741 370 ntBASIC2.71□□□□□ -1.98
MBD3L4A6NDZ8 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
MBD3L4A6NDZ8 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
MBD3L4A6NDZ8 RNU1-23P-201ENST00000363361 144 ntBASIC2.7□□□□□ -1.98
MBD3L4A6NDZ8 RNU6-546P-201ENST00000383991 107 ntBASIC2.7□□□□□ -1.98
MBD3L4A6NDZ8 RNU6-301P-201ENST00000384277 107 ntBASIC2.7□□□□□ -1.98
MBD3L4A6NDZ8 MIR184-201ENST00000384962 84 ntBASIC2.7□□□□□ -1.98
MBD3L4A6NDZ8 Y_RNA.595-201ENST00000410403 105 ntBASIC2.7□□□□□ -1.98
MBD3L4A6NDZ8 SNORD12B-201ENST00000410433 91 ntBASIC2.7□□□□□ -1.98
MBD3L4A6NDZ8 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.7□□□□□ -1.98
MBD3L4A6NDZ8 AC003685.2-201ENST00000422795 395 ntBASIC2.7□□□□□ -1.98
MBD3L4A6NDZ8 SDAD1P3-201ENST00000427380 333 ntBASIC2.7□□□□□ -1.98
MBD3L4A6NDZ8 FCF1P4-201ENST00000448326 183 ntBASIC2.7□□□□□ -1.98
MBD3L4A6NDZ8 AC010469.2-201ENST00000496412 480 ntBASIC2.7□□□□□ -1.98
MBD3L4A6NDZ8 Y_RNA.683-201ENST00000516508 93 ntBASIC2.7□□□□□ -1.98
MBD3L4A6NDZ8 RNU6-1046P-201ENST00000516538 107 ntBASIC2.7□□□□□ -1.98
MBD3L4A6NDZ8 RNU1-117P-201ENST00000517041 158 ntBASIC2.7□□□□□ -1.98
MBD3L4A6NDZ8 AL449363.1-201ENST00000617815 186 ntBASIC2.7□□□□□ -1.98
MBD3L4A6NDZ8 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.7□□□□□ -1.98
MBD3L4A6NDZ8 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.7□□□□□ -1.98
MBD3L4A6NDZ8 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC2.7□□□□□ -1.98
MBD3L4A6NDZ8 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
MBD3L4A6NDZ8 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
MBD3L4A6NDZ8 AC073325.2-201ENST00000339545 159 ntBASIC2.69□□□□□ -1.98
MBD3L4A6NDZ8 Y_RNA.153-201ENST00000363615 91 ntBASIC2.69□□□□□ -1.98
MBD3L4A6NDZ8 RNU6-234P-201ENST00000365229 104 ntBASIC2.69□□□□□ -1.98
MBD3L4A6NDZ8 SNORA63.7-201ENST00000365579 123 ntBASIC2.69□□□□□ -1.98
MBD3L4A6NDZ8 Y_RNA.380-201ENST00000365663 111 ntBASIC2.69□□□□□ -1.98
MBD3L4A6NDZ8 MIR329-1-201ENST00000385028 80 ntBASIC2.69□□□□□ -1.98
MBD3L4A6NDZ8 MIR95-201ENST00000385072 81 ntBASIC2.69□□□□□ -1.98
MBD3L4A6NDZ8 AL033519.2-201ENST00000403958 392 ntBASIC2.69□□□□□ -1.98
MBD3L4A6NDZ8 MIR1252-201ENST00000408861 65 ntBASIC2.69□□□□□ -1.98
MBD3L4A6NDZ8 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.69□□□□□ -1.98
MBD3L4A6NDZ8 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
MBD3L4A6NDZ8 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.69□□□□□ -1.98
MBD3L4A6NDZ8 AC009237.7-201ENST00000447357 229 ntBASIC2.69□□□□□ -1.98
MBD3L4A6NDZ8 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.69□□□□□ -1.98
MBD3L4A6NDZ8 AC117440.1-201ENST00000474107 571 ntBASIC2.69□□□□□ -1.98
MBD3L4A6NDZ8 AC091179.3-201ENST00000474761 144 ntBASIC2.69□□□□□ -1.98
MBD3L4A6NDZ8 AC092185.1-201ENST00000491371 97 ntBASIC2.69□□□□□ -1.98
MBD3L4A6NDZ8 RPS23P5-201ENST00000495419 428 ntBASIC2.69□□□□□ -1.98
MBD3L4A6NDZ8 RNA5SP217-201ENST00000515959 91 ntBASIC2.69□□□□□ -1.98
MBD3L4A6NDZ8 RNU6-397P-201ENST00000516226 104 ntBASIC2.69□□□□□ -1.98
MBD3L4A6NDZ8 RN7SKP49-201ENST00000516675 260 ntBASIC2.69□□□□□ -1.98
MBD3L4A6NDZ8 RNU6-1098P-201ENST00000516772 96 ntBASIC2.69□□□□□ -1.98
MBD3L4A6NDZ8 AC131281.1-201ENST00000522984 164 ntBASIC2.69□□□□□ -1.98
MBD3L4A6NDZ8 AC018630.3-201ENST00000542637 96 ntBASIC2.69□□□□□ -1.98
MBD3L4A6NDZ8 MZT1P2-201ENST00000604387 248 ntBASIC2.69□□□□□ -1.98
MBD3L4A6NDZ8 SNORD11B-201ENST00000607707 90 ntBASIC2.69□□□□□ -1.98
MBD3L4A6NDZ8 RMST_8.1-201ENST00000610287 165 ntBASIC2.69□□□□□ -1.98
MBD3L4A6NDZ8 AL078596.1-201ENST00000624856 447 ntBASIC2.69□□□□□ -1.98
MBD3L4A6NDZ8 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
MBD3L4A6NDZ8 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.69□□□□□ -1.98
MBD3L4A6NDZ8 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
MBD3L4A6NDZ8 MTND5P35-201ENST00000557537 1720 ntBASIC2.68□□□□□ -1.98
MBD3L4A6NDZ8 Y_RNA.152-201ENST00000363578 100 ntBASIC2.68□□□□□ -1.98
MBD3L4A6NDZ8 RNU6-743P-201ENST00000364151 106 ntBASIC2.68□□□□□ -1.98
MBD3L4A6NDZ8 RNU6-1026P-201ENST00000384465 108 ntBASIC2.68□□□□□ -1.98
MBD3L4A6NDZ8 Y_RNA.551-201ENST00000384661 102 ntBASIC2.68□□□□□ -1.98
MBD3L4A6NDZ8 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
MBD3L4A6NDZ8 AL356057.3-201ENST00000402607 340 ntBASIC2.68□□□□□ -1.98
MBD3L4A6NDZ8 EEF1A1P41-201ENST00000414667 207 ntBASIC2.68□□□□□ -1.98
MBD3L4A6NDZ8 AC022018.1-201ENST00000430685 241 ntBASIC2.68□□□□□ -1.98
MBD3L4A6NDZ8 AL139132.1-201ENST00000431587 344 ntBASIC2.68□□□□□ -1.98
MBD3L4A6NDZ8 IFNA11P-201ENST00000446352 526 ntBASIC2.68□□□□□ -1.98
MBD3L4A6NDZ8 UQCRBP2-201ENST00000447827 297 ntBASIC2.68□□□□□ -1.98
MBD3L4A6NDZ8 U8.20-201ENST00000459445 131 ntBASIC2.68□□□□□ -1.98
MBD3L4A6NDZ8 MTATP8P1-201ENST00000467115 207 ntBASIC2.68□□□□□ -1.98
MBD3L4A6NDZ8 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.68□□□□□ -1.98
MBD3L4A6NDZ8 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms