Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 SNORD114-19-201ENST00000363072 75 ntBASIC2.85□□□□□ -1.95
CCDC187A0A096LP49 Y_RNA.150-201ENST00000363562 102 ntBASIC2.85□□□□□ -1.95
CCDC187A0A096LP49 Y_RNA.183-201ENST00000363882 113 ntBASIC2.85□□□□□ -1.95
CCDC187A0A096LP49 RNU6-1286P-201ENST00000383871 107 ntBASIC2.85□□□□□ -1.95
CCDC187A0A096LP49 RNU6-968P-201ENST00000384076 107 ntBASIC2.85□□□□□ -1.95
CCDC187A0A096LP49 RNU6-746P-201ENST00000384112 109 ntBASIC2.85□□□□□ -1.95
CCDC187A0A096LP49 RNU6-708P-201ENST00000384217 107 ntBASIC2.85□□□□□ -1.95
CCDC187A0A096LP49 RNU6-886P-201ENST00000384319 105 ntBASIC2.85□□□□□ -1.95
CCDC187A0A096LP49 RNU2-25P-201ENST00000411041 191 ntBASIC2.85□□□□□ -1.95
CCDC187A0A096LP49 AL513477.1-202ENST00000417061 214 ntBASIC2.85□□□□□ -1.95
CCDC187A0A096LP49 CYCSP48-201ENST00000417124 323 ntBASIC2.85□□□□□ -1.95
CCDC187A0A096LP49 AC078809.1-201ENST00000427601 140 ntBASIC2.85□□□□□ -1.95
CCDC187A0A096LP49 PRELID3BP1-201ENST00000457142 540 ntBASIC2.85□□□□□ -1.95
CCDC187A0A096LP49 SNRPGP7-201ENST00000469016 106 ntBASIC2.85□□□□□ -1.95
CCDC187A0A096LP49 AC091874.1-201ENST00000511402 339 ntBASIC2.85□□□□□ -1.95
CCDC187A0A096LP49 SNORA40.15-201ENST00000516884 107 ntBASIC2.85□□□□□ -1.95
CCDC187A0A096LP49 SNORA31.26-201ENST00000517250 137 ntBASIC2.85□□□□□ -1.95
CCDC187A0A096LP49 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.85□□□□□ -1.95
CCDC187A0A096LP49 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.85□□□□□ -1.95
CCDC187A0A096LP49 AC115990.1-201ENST00000526957 301 ntBASIC2.85□□□□□ -1.95
CCDC187A0A096LP49 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.85□□□□□ -1.95
CCDC187A0A096LP49 AC004584.2-201ENST00000570407 410 ntBASIC2.85□□□□□ -1.95
CCDC187A0A096LP49 MIR3910-1-201ENST00000580936 111 ntBASIC2.85□□□□□ -1.95
CCDC187A0A096LP49 AL390123.1-201ENST00000603216 237 ntBASIC2.85□□□□□ -1.95
CCDC187A0A096LP49 MIR1244-1-201ENST00000612829 85 ntBASIC2.85□□□□□ -1.95
CCDC187A0A096LP49 AC004792.1-201ENST00000614523 137 ntBASIC2.85□□□□□ -1.95
CCDC187A0A096LP49 MIR1244-3-201ENST00000635744 85 ntBASIC2.85□□□□□ -1.95
CCDC187A0A096LP49 MIR1244-2-201ENST00000636449 85 ntBASIC2.85□□□□□ -1.95
CCDC187A0A096LP49 MIR1244-4-202ENST00000636813 85 ntBASIC2.85□□□□□ -1.95
CCDC187A0A096LP49 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CCDC187A0A096LP49 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CCDC187A0A096LP49 AL109809.4-201ENST00000603520 2185 ntBASIC2.85□□□□□ -1.95
CCDC187A0A096LP49 AC233981.2-201ENST00000611524 1614 ntBASIC2.85□□□□□ -1.95
CCDC187A0A096LP49 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
CCDC187A0A096LP49 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CCDC187A0A096LP49 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CCDC187A0A096LP49 AC092268.1-201ENST00000342691 405 ntBASIC2.84□□□□□ -1.95
CCDC187A0A096LP49 snoU2_19.2-201ENST00000363024 80 ntBASIC2.84□□□□□ -1.95
CCDC187A0A096LP49 RNU6-1285P-201ENST00000363480 105 ntBASIC2.84□□□□□ -1.95
CCDC187A0A096LP49 SNORD56.3-201ENST00000363507 71 ntBASIC2.84□□□□□ -1.95
CCDC187A0A096LP49 SNORA68.1-201ENST00000364537 132 ntBASIC2.84□□□□□ -1.95
CCDC187A0A096LP49 RNU6-1083P-201ENST00000384022 107 ntBASIC2.84□□□□□ -1.95
CCDC187A0A096LP49 MIR215-201ENST00000384858 110 ntBASIC2.84□□□□□ -1.95
CCDC187A0A096LP49 MIR625-201ENST00000385047 85 ntBASIC2.84□□□□□ -1.95
CCDC187A0A096LP49 MIR548H3-201ENST00000408771 118 ntBASIC2.84□□□□□ -1.95
CCDC187A0A096LP49 RNU6-1140P-201ENST00000410517 106 ntBASIC2.84□□□□□ -1.95
CCDC187A0A096LP49 AL139156.1-201ENST00000412785 841 ntBASIC2.84□□□□□ -1.95
CCDC187A0A096LP49 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC187A0A096LP49 MTCO3P19-201ENST00000415864 321 ntBASIC2.84□□□□□ -1.95
CCDC187A0A096LP49 AC244670.1-201ENST00000436879 112 ntBASIC2.84□□□□□ -1.95
CCDC187A0A096LP49 Z96811.1-201ENST00000445880 108 ntBASIC2.84□□□□□ -1.95
CCDC187A0A096LP49 RN7SKP210-201ENST00000459176 261 ntBASIC2.84□□□□□ -1.95
CCDC187A0A096LP49 RNU7-169P-201ENST00000459456 61 ntBASIC2.84□□□□□ -1.95
CCDC187A0A096LP49 RPL30P10-201ENST00000488148 337 ntBASIC2.84□□□□□ -1.95
CCDC187A0A096LP49 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC187A0A096LP49 HMGB1P35-201ENST00000503360 598 ntBASIC2.84□□□□□ -1.95
CCDC187A0A096LP49 RNU6-1212P-201ENST00000517023 104 ntBASIC2.84□□□□□ -1.95
CCDC187A0A096LP49 AL590705.4-201ENST00000532209 134 ntBASIC2.84□□□□□ -1.95
CCDC187A0A096LP49 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC187A0A096LP49 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.84□□□□□ -1.95
CCDC187A0A096LP49 SNORA43.4-201ENST00000629559 138 ntBASIC2.84□□□□□ -1.95
CCDC187A0A096LP49 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.84□□□□□ -1.95
CCDC187A0A096LP49 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.84□□□□□ -1.95
CCDC187A0A096LP49 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.84□□□□□ -1.96
CCDC187A0A096LP49 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.84□□□□□ -1.96
CCDC187A0A096LP49 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CCDC187A0A096LP49 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
CCDC187A0A096LP49 AC062016.1-201ENST00000355719 319 ntBASIC2.83□□□□□ -1.96
CCDC187A0A096LP49 Y_RNA.29-201ENST00000362570 113 ntBASIC2.83□□□□□ -1.96
CCDC187A0A096LP49 RNU6-774P-201ENST00000363238 107 ntBASIC2.83□□□□□ -1.96
CCDC187A0A096LP49 SNORD27-201ENST00000363981 72 ntBASIC2.83□□□□□ -1.96
CCDC187A0A096LP49 RNU6-280P-201ENST00000364145 104 ntBASIC2.83□□□□□ -1.96
CCDC187A0A096LP49 SNORD113-1-201ENST00000365321 69 ntBASIC2.83□□□□□ -1.96
CCDC187A0A096LP49 Y_RNA.471-201ENST00000384312 102 ntBASIC2.83□□□□□ -1.96
CCDC187A0A096LP49 Y_RNA.504-201ENST00000384481 104 ntBASIC2.83□□□□□ -1.96
CCDC187A0A096LP49 RNU6-700P-201ENST00000391043 107 ntBASIC2.83□□□□□ -1.96
CCDC187A0A096LP49 Y_RNA.592-201ENST00000410274 109 ntBASIC2.83□□□□□ -1.96
CCDC187A0A096LP49 AC104332.2-201ENST00000429959 156 ntBASIC2.83□□□□□ -1.96
CCDC187A0A096LP49 AC104332.1-201ENST00000440471 797 ntBASIC2.83□□□□□ -1.96
CCDC187A0A096LP49 AL139109.1-201ENST00000455491 297 ntBASIC2.83□□□□□ -1.96
CCDC187A0A096LP49 RPL36AP48-201ENST00000485521 314 ntBASIC2.83□□□□□ -1.96
CCDC187A0A096LP49 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC187A0A096LP49 AC067942.3-201ENST00000512025 362 ntBASIC2.83□□□□□ -1.96
CCDC187A0A096LP49 SCARNA17.1-201ENST00000516211 143 ntBASIC2.83□□□□□ -1.96
CCDC187A0A096LP49 SNORA31.6-201ENST00000516241 130 ntBASIC2.83□□□□□ -1.96
CCDC187A0A096LP49 SCARNA17.2-201ENST00000516334 143 ntBASIC2.83□□□□□ -1.96
CCDC187A0A096LP49 AC144568.1-201ENST00000520139 137 ntBASIC2.83□□□□□ -1.96
CCDC187A0A096LP49 MRPS36P4-201ENST00000534436 298 ntBASIC2.83□□□□□ -1.96
CCDC187A0A096LP49 AC079598.5-201ENST00000547460 117 ntBASIC2.83□□□□□ -1.96
CCDC187A0A096LP49 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.83□□□□□ -1.96
CCDC187A0A096LP49 AC013412.1-201ENST00000610687 192 ntBASIC2.83□□□□□ -1.96
CCDC187A0A096LP49 SCARNA17.4-201ENST00000614296 143 ntBASIC2.83□□□□□ -1.96
CCDC187A0A096LP49 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.83□□□□□ -1.96
CCDC187A0A096LP49 AC073476.4-201ENST00000628409 72 ntBASIC2.83□□□□□ -1.96
CCDC187A0A096LP49 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.83□□□□□ -1.96
CCDC187A0A096LP49 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.83□□□□□ -1.96
CCDC187A0A096LP49 AL359854.1-201ENST00000614203 1594 ntBASIC2.83□□□□□ -1.96
CCDC187A0A096LP49 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
CCDC187A0A096LP49 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.82□□□□□ -1.96
CCDC187A0A096LP49 AC073325.2-201ENST00000339545 159 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms