Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AL121890.1-201ENST00000435457 205 ntBASIC4.04□□□□□ -1.76
PCDHGA11Q9Y5H2 RPS29P33-201ENST00000456717 146 ntBASIC4.04□□□□□ -1.76
PCDHGA11Q9Y5H2 RNU7-197P-201ENST00000458836 62 ntBASIC4.04□□□□□ -1.76
PCDHGA11Q9Y5H2 RNU7-14P-201ENST00000459331 62 ntBASIC4.04□□□□□ -1.76
PCDHGA11Q9Y5H2 RN7SL303P-201ENST00000469773 251 ntBASIC4.04□□□□□ -1.76
PCDHGA11Q9Y5H2 RPL36AP21-201ENST00000490372 323 ntBASIC4.04□□□□□ -1.76
PCDHGA11Q9Y5H2 RNA5SP112-201ENST00000515937 99 ntBASIC4.04□□□□□ -1.76
PCDHGA11Q9Y5H2 RNA5SP519-201ENST00000516480 119 ntBASIC4.04□□□□□ -1.76
PCDHGA11Q9Y5H2 RNU6-1337P-201ENST00000516525 95 ntBASIC4.04□□□□□ -1.76
PCDHGA11Q9Y5H2 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC4.04□□□□□ -1.76
PCDHGA11Q9Y5H2 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC4.04□□□□□ -1.76
PCDHGA11Q9Y5H2 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.04□□□□□ -1.76
PCDHGA11Q9Y5H2 AC103810.1-201ENST00000579873 453 ntBASIC4.04□□□□□ -1.76
PCDHGA11Q9Y5H2 MIR5096-201ENST00000583713 70 ntBASIC4.04□□□□□ -1.76
PCDHGA11Q9Y5H2 MIR4765-201ENST00000585007 77 ntBASIC4.04□□□□□ -1.76
PCDHGA11Q9Y5H2 AP003357.1-201ENST00000604497 148 ntBASIC4.04□□□□□ -1.76
PCDHGA11Q9Y5H2 ARF4P1-201ENST00000605447 541 ntBASIC4.04□□□□□ -1.76
PCDHGA11Q9Y5H2 AP001340.1-201ENST00000624405 217 ntBASIC4.04□□□□□ -1.76
PCDHGA11Q9Y5H2 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.04□□□□□ -1.76
PCDHGA11Q9Y5H2 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PCDHGA11Q9Y5H2 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
PCDHGA11Q9Y5H2 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
PCDHGA11Q9Y5H2 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
PCDHGA11Q9Y5H2 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
PCDHGA11Q9Y5H2 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PCDHGA11Q9Y5H2 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.04□□□□□ -1.76
PCDHGA11Q9Y5H2 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PCDHGA11Q9Y5H2 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PCDHGA11Q9Y5H2 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.03□□□□□ -1.76
PCDHGA11Q9Y5H2 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.03□□□□□ -1.76
PCDHGA11Q9Y5H2 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PCDHGA11Q9Y5H2 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PCDHGA11Q9Y5H2 RNA5SP509-201ENST00000364577 119 ntBASIC4.03□□□□□ -1.76
PCDHGA11Q9Y5H2 RNU6-1323P-201ENST00000384025 107 ntBASIC4.03□□□□□ -1.76
PCDHGA11Q9Y5H2 SNORA20B-201ENST00000384220 132 ntBASIC4.03□□□□□ -1.76
PCDHGA11Q9Y5H2 MIR585-201ENST00000384887 94 ntBASIC4.03□□□□□ -1.76
PCDHGA11Q9Y5H2 AP000567.1-201ENST00000406413 156 ntBASIC4.03□□□□□ -1.76
PCDHGA11Q9Y5H2 AC010154.1-201ENST00000425857 269 ntBASIC4.03□□□□□ -1.76
PCDHGA11Q9Y5H2 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC4.03□□□□□ -1.76
PCDHGA11Q9Y5H2 AL031183.1-201ENST00000457667 207 ntBASIC4.03□□□□□ -1.76
PCDHGA11Q9Y5H2 RPS23P1-201ENST00000491662 432 ntBASIC4.03□□□□□ -1.76
PCDHGA11Q9Y5H2 AC010598.1-201ENST00000510378 103 ntBASIC4.03□□□□□ -1.76
PCDHGA11Q9Y5H2 RNU6-561P-201ENST00000516222 102 ntBASIC4.03□□□□□ -1.76
PCDHGA11Q9Y5H2 Y_RNA.686-201ENST00000516548 134 ntBASIC4.03□□□□□ -1.76
PCDHGA11Q9Y5H2 AP001328.1-201ENST00000528550 176 ntBASIC4.03□□□□□ -1.76
PCDHGA11Q9Y5H2 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.03□□□□□ -1.76
PCDHGA11Q9Y5H2 MIR4330-201ENST00000579077 105 ntBASIC4.03□□□□□ -1.76
PCDHGA11Q9Y5H2 POLR3GP1-201ENST00000594073 261 ntBASIC4.03□□□□□ -1.76
PCDHGA11Q9Y5H2 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
PCDHGA11Q9Y5H2 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC4.03□□□□□ -1.76
PCDHGA11Q9Y5H2 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.03□□□□□ -1.76
PCDHGA11Q9Y5H2 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.03□□□□□ -1.76
PCDHGA11Q9Y5H2 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.03□□□□□ -1.76
PCDHGA11Q9Y5H2 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.77
PCDHGA11Q9Y5H2 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHGA11Q9Y5H2 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.02□□□□□ -1.77
PCDHGA11Q9Y5H2 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHGA11Q9Y5H2 RNA5SP295-201ENST00000362655 121 ntBASIC4.02□□□□□ -1.77
PCDHGA11Q9Y5H2 Y_RNA.124-201ENST00000363339 93 ntBASIC4.02□□□□□ -1.77
PCDHGA11Q9Y5H2 RNU1-132P-201ENST00000364300 164 ntBASIC4.02□□□□□ -1.77
PCDHGA11Q9Y5H2 RNU6-1180P-201ENST00000364935 107 ntBASIC4.02□□□□□ -1.77
PCDHGA11Q9Y5H2 RNU6-768P-201ENST00000384683 107 ntBASIC4.02□□□□□ -1.77
PCDHGA11Q9Y5H2 MIR937-201ENST00000401271 86 ntBASIC4.02□□□□□ -1.77
PCDHGA11Q9Y5H2 RNU6-1077P-201ENST00000410506 102 ntBASIC4.02□□□□□ -1.77
PCDHGA11Q9Y5H2 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.02□□□□□ -1.77
PCDHGA11Q9Y5H2 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHGA11Q9Y5H2 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDHGA11Q9Y5H2 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.02□□□□□ -1.77
PCDHGA11Q9Y5H2 AC092991.1-201ENST00000477176 376 ntBASIC4.02□□□□□ -1.77
PCDHGA11Q9Y5H2 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.02□□□□□ -1.77
PCDHGA11Q9Y5H2 TVP23BP1-201ENST00000557500 617 ntBASIC4.02□□□□□ -1.77
PCDHGA11Q9Y5H2 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.02□□□□□ -1.77
PCDHGA11Q9Y5H2 AC005972.2-201ENST00000604690 348 ntBASIC4.02□□□□□ -1.77
PCDHGA11Q9Y5H2 snoZ196.1-201ENST00000625269 89 ntBASIC4.02□□□□□ -1.77
PCDHGA11Q9Y5H2 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.02□□□□□ -1.77
PCDHGA11Q9Y5H2 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHGA11Q9Y5H2 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.02□□□□□ -1.77
PCDHGA11Q9Y5H2 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.01□□□□□ -1.77
PCDHGA11Q9Y5H2 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.01□□□□□ -1.77
PCDHGA11Q9Y5H2 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHGA11Q9Y5H2 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHGA11Q9Y5H2 MIR423-201ENST00000362201 94 ntBASIC4.01□□□□□ -1.77
PCDHGA11Q9Y5H2 SNORA27.1-201ENST00000362604 124 ntBASIC4.01□□□□□ -1.77
PCDHGA11Q9Y5H2 RNA5SP366-201ENST00000365454 123 ntBASIC4.01□□□□□ -1.77
PCDHGA11Q9Y5H2 RNU1-89P-201ENST00000384592 164 ntBASIC4.01□□□□□ -1.77
PCDHGA11Q9Y5H2 RNA5SP496-201ENST00000391240 109 ntBASIC4.01□□□□□ -1.77
PCDHGA11Q9Y5H2 SNORA75.5-201ENST00000391291 81 ntBASIC4.01□□□□□ -1.77
PCDHGA11Q9Y5H2 HMGN2P8-201ENST00000391458 268 ntBASIC4.01□□□□□ -1.77
PCDHGA11Q9Y5H2 AL139095.1-201ENST00000404326 391 ntBASIC4.01□□□□□ -1.77
PCDHGA11Q9Y5H2 AL512604.1-201ENST00000404812 257 ntBASIC4.01□□□□□ -1.77
PCDHGA11Q9Y5H2 AL355796.1-201ENST00000406706 323 ntBASIC4.01□□□□□ -1.77
PCDHGA11Q9Y5H2 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC4.01□□□□□ -1.77
PCDHGA11Q9Y5H2 AL358232.1-201ENST00000448030 501 ntBASIC4.01□□□□□ -1.77
PCDHGA11Q9Y5H2 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.01□□□□□ -1.77
PCDHGA11Q9Y5H2 RNA5SP246-201ENST00000458909 119 ntBASIC4.01□□□□□ -1.77
PCDHGA11Q9Y5H2 AC109327.1-201ENST00000471666 403 ntBASIC4.01□□□□□ -1.77
PCDHGA11Q9Y5H2 AC006445.1-201ENST00000491925 405 ntBASIC4.01□□□□□ -1.77
PCDHGA11Q9Y5H2 RN7SKP179-201ENST00000516126 217 ntBASIC4.01□□□□□ -1.77
PCDHGA11Q9Y5H2 RNU2-56P-201ENST00000516826 190 ntBASIC4.01□□□□□ -1.77
PCDHGA11Q9Y5H2 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms