Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PCDHGA9Q9Y5G4 RNU6-222P-201ENST00000362438 107 ntBASIC3.02□□□□□ -1.93
PCDHGA9Q9Y5G4 RNU1-76P-201ENST00000362903 159 ntBASIC3.02□□□□□ -1.93
PCDHGA9Q9Y5G4 RNU6-879P-201ENST00000364328 108 ntBASIC3.02□□□□□ -1.93
PCDHGA9Q9Y5G4 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.02□□□□□ -1.93
PCDHGA9Q9Y5G4 MIR95-201ENST00000385072 81 ntBASIC3.02□□□□□ -1.93
PCDHGA9Q9Y5G4 Y_RNA.597-201ENST00000410463 100 ntBASIC3.02□□□□□ -1.93
PCDHGA9Q9Y5G4 MTND2P23-201ENST00000422990 651 ntBASIC3.02□□□□□ -1.93
PCDHGA9Q9Y5G4 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.02□□□□□ -1.93
PCDHGA9Q9Y5G4 CHEK2P4-201ENST00000450340 246 ntBASIC3.02□□□□□ -1.93
PCDHGA9Q9Y5G4 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.02□□□□□ -1.93
PCDHGA9Q9Y5G4 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.02□□□□□ -1.93
PCDHGA9Q9Y5G4 SNORA25.14-201ENST00000516481 132 ntBASIC3.02□□□□□ -1.93
PCDHGA9Q9Y5G4 RN7SKP49-201ENST00000516675 260 ntBASIC3.02□□□□□ -1.93
PCDHGA9Q9Y5G4 RNU6-56P-201ENST00000516986 93 ntBASIC3.02□□□□□ -1.93
PCDHGA9Q9Y5G4 AC090517.1-201ENST00000569307 266 ntBASIC3.02□□□□□ -1.93
PCDHGA9Q9Y5G4 MIR5695-201ENST00000579717 85 ntBASIC3.02□□□□□ -1.93
PCDHGA9Q9Y5G4 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.02□□□□□ -1.93
PCDHGA9Q9Y5G4 AC104695.3-201ENST00000604052 296 ntBASIC3.02□□□□□ -1.93
PCDHGA9Q9Y5G4 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.02□□□□□ -1.93
PCDHGA9Q9Y5G4 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.02□□□□□ -1.93
PCDHGA9Q9Y5G4 AC017071.1-201ENST00000564407 2204 ntBASIC3.02□□□□□ -1.93
PCDHGA9Q9Y5G4 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
PCDHGA9Q9Y5G4 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.02□□□□□ -1.93
PCDHGA9Q9Y5G4 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PCDHGA9Q9Y5G4 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.01□□□□□ -1.93
PCDHGA9Q9Y5G4 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PCDHGA9Q9Y5G4 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.01□□□□□ -1.93
PCDHGA9Q9Y5G4 RNU1-72P-201ENST00000362976 153 ntBASIC3.01□□□□□ -1.93
PCDHGA9Q9Y5G4 SNORD32B-201ENST00000364460 84 ntBASIC3.01□□□□□ -1.93
PCDHGA9Q9Y5G4 RNU6-26P-201ENST00000383985 107 ntBASIC3.01□□□□□ -1.93
PCDHGA9Q9Y5G4 SNORA18.3-201ENST00000384122 132 ntBASIC3.01□□□□□ -1.93
PCDHGA9Q9Y5G4 Y_RNA.485-201ENST00000384395 102 ntBASIC3.01□□□□□ -1.93
PCDHGA9Q9Y5G4 SNORA51.11-201ENST00000384442 131 ntBASIC3.01□□□□□ -1.93
PCDHGA9Q9Y5G4 RNA5SP213-201ENST00000391031 106 ntBASIC3.01□□□□□ -1.93
PCDHGA9Q9Y5G4 RNU6-823P-201ENST00000391042 103 ntBASIC3.01□□□□□ -1.93
PCDHGA9Q9Y5G4 Y_RNA.645-201ENST00000391229 102 ntBASIC3.01□□□□□ -1.93
PCDHGA9Q9Y5G4 MIR1252-201ENST00000408861 65 ntBASIC3.01□□□□□ -1.93
PCDHGA9Q9Y5G4 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.01□□□□□ -1.93
PCDHGA9Q9Y5G4 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.01□□□□□ -1.93
PCDHGA9Q9Y5G4 SDAD1P3-201ENST00000427380 333 ntBASIC3.01□□□□□ -1.93
PCDHGA9Q9Y5G4 AC107083.1-201ENST00000439643 279 ntBASIC3.01□□□□□ -1.93
PCDHGA9Q9Y5G4 AL445687.1-201ENST00000439946 251 ntBASIC3.01□□□□□ -1.93
PCDHGA9Q9Y5G4 MTND5P22-201ENST00000458380 195 ntBASIC3.01□□□□□ -1.93
PCDHGA9Q9Y5G4 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.01□□□□□ -1.93
PCDHGA9Q9Y5G4 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.01□□□□□ -1.93
PCDHGA9Q9Y5G4 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.01□□□□□ -1.93
PCDHGA9Q9Y5G4 AC107934.2-201ENST00000518653 310 ntBASIC3.01□□□□□ -1.93
PCDHGA9Q9Y5G4 AC022080.3-201ENST00000544433 482 ntBASIC3.01□□□□□ -1.93
PCDHGA9Q9Y5G4 AC008737.2-201ENST00000599446 118 ntBASIC3.01□□□□□ -1.93
PCDHGA9Q9Y5G4 AL355297.3-201ENST00000604082 446 ntBASIC3.01□□□□□ -1.93
PCDHGA9Q9Y5G4 AL121655.1-201ENST00000605811 308 ntBASIC3.01□□□□□ -1.93
PCDHGA9Q9Y5G4 AC116312.1-201ENST00000606841 314 ntBASIC3.01□□□□□ -1.93
PCDHGA9Q9Y5G4 AC010999.1-201ENST00000611856 324 ntBASIC3.01□□□□□ -1.93
PCDHGA9Q9Y5G4 AC018692.3-201ENST00000623929 123 ntBASIC3.01□□□□□ -1.93
PCDHGA9Q9Y5G4 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.01□□□□□ -1.93
PCDHGA9Q9Y5G4 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.01□□□□□ -1.93
PCDHGA9Q9Y5G4 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.01□□□□□ -1.93
PCDHGA9Q9Y5G4 AC093010.3-201ENST00000570269 15214 ntBASIC3.01□□□□□ -1.93
PCDHGA9Q9Y5G4 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PCDHGA9Q9Y5G4 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
PCDHGA9Q9Y5G4 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
PCDHGA9Q9Y5G4 RNU6-1301P-201ENST00000362724 104 ntBASIC3□□□□□ -1.93
PCDHGA9Q9Y5G4 RNU6-873P-201ENST00000363833 107 ntBASIC3□□□□□ -1.93
PCDHGA9Q9Y5G4 Y_RNA.179-201ENST00000363844 90 ntBASIC3□□□□□ -1.93
PCDHGA9Q9Y5G4 SET-203ENST00000372688 801 ntTSL 2 BASIC3□□□□□ -1.93
PCDHGA9Q9Y5G4 SNORA44-201ENST00000384584 132 ntBASIC3□□□□□ -1.93
PCDHGA9Q9Y5G4 SNORD78.2-201ENST00000391076 69 ntBASIC3□□□□□ -1.93
PCDHGA9Q9Y5G4 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3□□□□□ -1.93
PCDHGA9Q9Y5G4 AC103975.1-201ENST00000482506 483 ntBASIC3□□□□□ -1.93
PCDHGA9Q9Y5G4 SNORA48.11-201ENST00000517015 89 ntBASIC3□□□□□ -1.93
PCDHGA9Q9Y5G4 AC109329.2-201ENST00000519658 482 ntBASIC3□□□□□ -1.93
PCDHGA9Q9Y5G4 AC093023.1-201ENST00000547375 507 ntBASIC3□□□□□ -1.93
PCDHGA9Q9Y5G4 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3□□□□□ -1.93
PCDHGA9Q9Y5G4 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3□□□□□ -1.93
PCDHGA9Q9Y5G4 AC078899.3-201ENST00000599065 212 ntBASIC3□□□□□ -1.93
PCDHGA9Q9Y5G4 MIR7106-201ENST00000612419 65 ntBASIC3□□□□□ -1.93
PCDHGA9Q9Y5G4 AC073476.4-201ENST00000628409 72 ntBASIC3□□□□□ -1.93
PCDHGA9Q9Y5G4 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3□□□□□ -1.93
PCDHGA9Q9Y5G4 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
PCDHGA9Q9Y5G4 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
PCDHGA9Q9Y5G4 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3□□□□□ -1.93
PCDHGA9Q9Y5G4 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3□□□□□ -1.93
PCDHGA9Q9Y5G4 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
PCDHGA9Q9Y5G4 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
PCDHGA9Q9Y5G4 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.99□□□□□ -1.93
PCDHGA9Q9Y5G4 RNU6-1180P-201ENST00000364935 107 ntBASIC2.99□□□□□ -1.93
PCDHGA9Q9Y5G4 RNU6-793P-201ENST00000384233 104 ntBASIC2.99□□□□□ -1.93
PCDHGA9Q9Y5G4 SNORA7.4-201ENST00000384249 137 ntBASIC2.99□□□□□ -1.93
PCDHGA9Q9Y5G4 Y_RNA.527-201ENST00000384573 102 ntBASIC2.99□□□□□ -1.93
PCDHGA9Q9Y5G4 MIR561-201ENST00000385216 97 ntBASIC2.99□□□□□ -1.93
PCDHGA9Q9Y5G4 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
PCDHGA9Q9Y5G4 RNU6-220P-201ENST00000390919 107 ntBASIC2.99□□□□□ -1.93
PCDHGA9Q9Y5G4 Y_RNA.595-201ENST00000410403 105 ntBASIC2.99□□□□□ -1.93
PCDHGA9Q9Y5G4 RNU2-25P-201ENST00000411041 191 ntBASIC2.99□□□□□ -1.93
PCDHGA9Q9Y5G4 AC092427.1-202ENST00000430569 476 ntBASIC2.99□□□□□ -1.93
PCDHGA9Q9Y5G4 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.99□□□□□ -1.93
PCDHGA9Q9Y5G4 RPS23P5-201ENST00000495419 428 ntBASIC2.99□□□□□ -1.93
PCDHGA9Q9Y5G4 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.99□□□□□ -1.93
PCDHGA9Q9Y5G4 MIR4506-201ENST00000584693 77 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 188.9 ms