Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 RNU6-655P-201ENST00000362858 107 ntBASIC4.47□□□□□ -1.69
PCDHB3Q9Y5E6 Y_RNA.78-201ENST00000362970 110 ntBASIC4.47□□□□□ -1.69
PCDHB3Q9Y5E6 RNA5SP447-201ENST00000363749 119 ntBASIC4.47□□□□□ -1.69
PCDHB3Q9Y5E6 RNA5SP28-201ENST00000363841 119 ntBASIC4.47□□□□□ -1.69
PCDHB3Q9Y5E6 Y_RNA.796-201ENST00000364268 102 ntBASIC4.47□□□□□ -1.69
PCDHB3Q9Y5E6 Y_RNA.799-201ENST00000364992 102 ntBASIC4.47□□□□□ -1.69
PCDHB3Q9Y5E6 RNU6-117P-201ENST00000365415 107 ntBASIC4.47□□□□□ -1.69
PCDHB3Q9Y5E6 SNORD14D-201ENST00000384390 87 ntBASIC4.47□□□□□ -1.69
PCDHB3Q9Y5E6 YME1L1P1-201ENST00000429435 297 ntBASIC4.47□□□□□ -1.69
PCDHB3Q9Y5E6 AL445687.1-201ENST00000439946 251 ntBASIC4.47□□□□□ -1.69
PCDHB3Q9Y5E6 AC084357.1-201ENST00000473404 255 ntBASIC4.47□□□□□ -1.69
PCDHB3Q9Y5E6 AC015795.1-201ENST00000513669 327 ntBASIC4.47□□□□□ -1.69
PCDHB3Q9Y5E6 SNORD19.2-201ENST00000516978 73 ntBASIC4.47□□□□□ -1.69
PCDHB3Q9Y5E6 AC105129.1-201ENST00000560250 297 ntBASIC4.47□□□□□ -1.69
PCDHB3Q9Y5E6 FAM27D1-201ENST00000612308 341 ntBASIC4.47□□□□□ -1.69
PCDHB3Q9Y5E6 AP005019.3-201ENST00000620418 560 ntBASIC4.47□□□□□ -1.69
PCDHB3Q9Y5E6 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
PCDHB3Q9Y5E6 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.47□□□□□ -1.69
PCDHB3Q9Y5E6 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHB3Q9Y5E6 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.47□□□□□ -1.69
PCDHB3Q9Y5E6 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.47□□□□□ -1.69
PCDHB3Q9Y5E6 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
PCDHB3Q9Y5E6 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.46□□□□□ -1.69
PCDHB3Q9Y5E6 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.46□□□□□ -1.7
PCDHB3Q9Y5E6 AL136164.3-201ENST00000624429 3978 ntBASIC4.46□□□□□ -1.7
PCDHB3Q9Y5E6 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHB3Q9Y5E6 OR56B2P-202ENST00000641377 2453 ntBASIC4.46□□□□□ -1.7
PCDHB3Q9Y5E6 RNU6-1209P-201ENST00000363655 107 ntBASIC4.46□□□□□ -1.7
PCDHB3Q9Y5E6 AC023141.4-201ENST00000412031 328 ntBASIC4.46□□□□□ -1.7
PCDHB3Q9Y5E6 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.46□□□□□ -1.7
PCDHB3Q9Y5E6 AC245291.1-201ENST00000419501 328 ntBASIC4.46□□□□□ -1.7
PCDHB3Q9Y5E6 AC008155.2-201ENST00000464337 397 ntBASIC4.46□□□□□ -1.7
PCDHB3Q9Y5E6 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.46□□□□□ -1.7
PCDHB3Q9Y5E6 RNA5SP446-201ENST00000515955 82 ntBASIC4.46□□□□□ -1.7
PCDHB3Q9Y5E6 RNU6-1098P-201ENST00000516772 96 ntBASIC4.46□□□□□ -1.7
PCDHB3Q9Y5E6 AC107934.2-201ENST00000518653 310 ntBASIC4.46□□□□□ -1.7
PCDHB3Q9Y5E6 IGKV3-31-201ENST00000523109 329 ntBASIC4.46□□□□□ -1.7
PCDHB3Q9Y5E6 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.46□□□□□ -1.7
PCDHB3Q9Y5E6 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHB3Q9Y5E6 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHB3Q9Y5E6 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHB3Q9Y5E6 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHB3Q9Y5E6 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
PCDHB3Q9Y5E6 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.45□□□□□ -1.7
PCDHB3Q9Y5E6 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHB3Q9Y5E6 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHB3Q9Y5E6 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHB3Q9Y5E6 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
PCDHB3Q9Y5E6 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHB3Q9Y5E6 RNY4P6-201ENST00000363667 96 ntBASIC4.45□□□□□ -1.7
PCDHB3Q9Y5E6 Y_RNA.198-201ENST00000364013 98 ntBASIC4.45□□□□□ -1.7
PCDHB3Q9Y5E6 Y_RNA.342-201ENST00000365352 113 ntBASIC4.45□□□□□ -1.7
PCDHB3Q9Y5E6 RNU6-1124P-201ENST00000384169 107 ntBASIC4.45□□□□□ -1.7
PCDHB3Q9Y5E6 RNA5SP354-201ENST00000391247 136 ntBASIC4.45□□□□□ -1.7
PCDHB3Q9Y5E6 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.45□□□□□ -1.7
PCDHB3Q9Y5E6 PGBD4P5-201ENST00000445958 426 ntBASIC4.45□□□□□ -1.7
PCDHB3Q9Y5E6 AC107297.1-201ENST00000459991 176 ntBASIC4.45□□□□□ -1.7
PCDHB3Q9Y5E6 AP000873.1-201ENST00000463987 400 ntBASIC4.45□□□□□ -1.7
PCDHB3Q9Y5E6 AC011406.1-201ENST00000512440 370 ntBASIC4.45□□□□□ -1.7
PCDHB3Q9Y5E6 AC068339.1-201ENST00000526965 141 ntBASIC4.45□□□□□ -1.7
PCDHB3Q9Y5E6 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.45□□□□□ -1.7
PCDHB3Q9Y5E6 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.45□□□□□ -1.7
PCDHB3Q9Y5E6 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.45□□□□□ -1.7
PCDHB3Q9Y5E6 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
PCDHB3Q9Y5E6 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHB3Q9Y5E6 AC007496.3-201ENST00000624987 3443 ntBASIC4.44□□□□□ -1.7
PCDHB3Q9Y5E6 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHB3Q9Y5E6 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHB3Q9Y5E6 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHB3Q9Y5E6 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHB3Q9Y5E6 RNA5SP167-201ENST00000365461 116 ntBASIC4.44□□□□□ -1.7
PCDHB3Q9Y5E6 RNU6-1292P-201ENST00000383856 107 ntBASIC4.44□□□□□ -1.7
PCDHB3Q9Y5E6 MIR1283-1-201ENST00000408494 87 ntBASIC4.44□□□□□ -1.7
PCDHB3Q9Y5E6 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.44□□□□□ -1.7
PCDHB3Q9Y5E6 AC018634.1-201ENST00000437554 401 ntBASIC4.44□□□□□ -1.7
PCDHB3Q9Y5E6 AL441985.1-201ENST00000457727 251 ntBASIC4.44□□□□□ -1.7
PCDHB3Q9Y5E6 RNU6-221P-201ENST00000459541 99 ntBASIC4.44□□□□□ -1.7
PCDHB3Q9Y5E6 AC093663.1-201ENST00000497190 394 ntBASIC4.44□□□□□ -1.7
PCDHB3Q9Y5E6 MRPS36P2-201ENST00000512569 299 ntBASIC4.44□□□□□ -1.7
PCDHB3Q9Y5E6 RNU6-904P-201ENST00000516206 101 ntBASIC4.44□□□□□ -1.7
PCDHB3Q9Y5E6 RNA5SP395-201ENST00000516567 118 ntBASIC4.44□□□□□ -1.7
PCDHB3Q9Y5E6 RNU5F-4P-201ENST00000516581 114 ntBASIC4.44□□□□□ -1.7
PCDHB3Q9Y5E6 IGHVIII-67-2-201ENST00000519849 88 ntBASIC4.44□□□□□ -1.7
PCDHB3Q9Y5E6 AC141557.1-201ENST00000540982 400 ntBASIC4.44□□□□□ -1.7
PCDHB3Q9Y5E6 U3.53-201ENST00000628922 216 ntBASIC4.44□□□□□ -1.7
PCDHB3Q9Y5E6 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.44□□□□□ -1.7
PCDHB3Q9Y5E6 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.44□□□□□ -1.7
PCDHB3Q9Y5E6 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHB3Q9Y5E6 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHB3Q9Y5E6 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
PCDHB3Q9Y5E6 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHB3Q9Y5E6 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
PCDHB3Q9Y5E6 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHB3Q9Y5E6 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.43□□□□□ -1.7
PCDHB3Q9Y5E6 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.43□□□□□ -1.7
PCDHB3Q9Y5E6 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHB3Q9Y5E6 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.43□□□□□ -1.7
PCDHB3Q9Y5E6 SDHCP2-201ENST00000398565 501 ntBASIC4.43□□□□□ -1.7
PCDHB3Q9Y5E6 AL117342.1-201ENST00000404861 406 ntBASIC4.43□□□□□ -1.7
PCDHB3Q9Y5E6 SNRPGP5-201ENST00000456003 220 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms