Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 SNORA9.2-201ENST00000365361 133 ntBASIC3.41□□□□□ -1.86
CTDP1Q9Y5B0 U8.9-201ENST00000365667 134 ntBASIC3.41□□□□□ -1.86
CTDP1Q9Y5B0 MIR32-201ENST00000384965 70 ntBASIC3.41□□□□□ -1.86
CTDP1Q9Y5B0 MIR627-201ENST00000384979 97 ntBASIC3.41□□□□□ -1.86
CTDP1Q9Y5B0 SNORA26.7-201ENST00000391288 122 ntBASIC3.41□□□□□ -1.86
CTDP1Q9Y5B0 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.41□□□□□ -1.86
CTDP1Q9Y5B0 RNU6-1203P-201ENST00000410703 110 ntBASIC3.41□□□□□ -1.86
CTDP1Q9Y5B0 RNA5SP344-201ENST00000411081 104 ntBASIC3.41□□□□□ -1.86
CTDP1Q9Y5B0 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.41□□□□□ -1.86
CTDP1Q9Y5B0 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.41□□□□□ -1.86
CTDP1Q9Y5B0 AC139712.2-201ENST00000424302 339 ntBASIC3.41□□□□□ -1.86
CTDP1Q9Y5B0 AC146507.2-201ENST00000460608 476 ntBASIC3.41□□□□□ -1.86
CTDP1Q9Y5B0 RPL30P1-201ENST00000488676 339 ntBASIC3.41□□□□□ -1.86
CTDP1Q9Y5B0 RN7SL20P-201ENST00000488827 297 ntBASIC3.41□□□□□ -1.86
CTDP1Q9Y5B0 RPS27P26-201ENST00000494583 239 ntBASIC3.41□□□□□ -1.86
CTDP1Q9Y5B0 RPS27AP10-201ENST00000496103 208 ntBASIC3.41□□□□□ -1.86
CTDP1Q9Y5B0 AC091874.1-201ENST00000511402 339 ntBASIC3.41□□□□□ -1.86
CTDP1Q9Y5B0 SCARNA20.6-201ENST00000517251 106 ntBASIC3.41□□□□□ -1.86
CTDP1Q9Y5B0 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.41□□□□□ -1.86
CTDP1Q9Y5B0 AC007375.1-201ENST00000554513 578 ntBASIC3.41□□□□□ -1.86
CTDP1Q9Y5B0 AL033523.1-201ENST00000605153 153 ntBASIC3.41□□□□□ -1.86
CTDP1Q9Y5B0 RMST_6.1-201ENST00000611980 203 ntBASIC3.41□□□□□ -1.86
CTDP1Q9Y5B0 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
CTDP1Q9Y5B0 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CTDP1Q9Y5B0 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.4□□□□□ -1.86
CTDP1Q9Y5B0 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CTDP1Q9Y5B0 Y_RNA.143-201ENST00000363520 106 ntBASIC3.4□□□□□ -1.87
CTDP1Q9Y5B0 RNU6-1280P-201ENST00000365211 107 ntBASIC3.4□□□□□ -1.87
CTDP1Q9Y5B0 RNU6-142P-201ENST00000384019 107 ntBASIC3.4□□□□□ -1.87
CTDP1Q9Y5B0 RNU6-17P-201ENST00000384245 107 ntBASIC3.4□□□□□ -1.87
CTDP1Q9Y5B0 RNU6-18P-201ENST00000384527 107 ntBASIC3.4□□□□□ -1.87
CTDP1Q9Y5B0 MIR215-201ENST00000384858 110 ntBASIC3.4□□□□□ -1.87
CTDP1Q9Y5B0 SNORD78.2-201ENST00000391076 69 ntBASIC3.4□□□□□ -1.87
CTDP1Q9Y5B0 MIR548H3-201ENST00000408771 118 ntBASIC3.4□□□□□ -1.87
CTDP1Q9Y5B0 AC074117.2-201ENST00000417130 397 ntBASIC3.4□□□□□ -1.87
CTDP1Q9Y5B0 AL358075.3-201ENST00000426289 226 ntBASIC3.4□□□□□ -1.87
CTDP1Q9Y5B0 AL139132.1-201ENST00000431587 344 ntBASIC3.4□□□□□ -1.87
CTDP1Q9Y5B0 RPS12P18-201ENST00000442381 270 ntBASIC3.4□□□□□ -1.87
CTDP1Q9Y5B0 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.4□□□□□ -1.87
CTDP1Q9Y5B0 RPL26P9-201ENST00000457466 433 ntBASIC3.4□□□□□ -1.87
CTDP1Q9Y5B0 SNRPGP7-201ENST00000469016 106 ntBASIC3.4□□□□□ -1.87
CTDP1Q9Y5B0 MRPL42P6-201ENST00000486397 371 ntBASIC3.4□□□□□ -1.87
CTDP1Q9Y5B0 RPS29P20-201ENST00000489592 171 ntBASIC3.4□□□□□ -1.87
CTDP1Q9Y5B0 HMGB3P17-201ENST00000504195 649 ntBASIC3.4□□□□□ -1.87
CTDP1Q9Y5B0 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.4□□□□□ -1.87
CTDP1Q9Y5B0 AC091826.1-201ENST00000514065 313 ntBASIC3.4□□□□□ -1.87
CTDP1Q9Y5B0 CR383656.8-201ENST00000549046 145 ntBASIC3.4□□□□□ -1.87
CTDP1Q9Y5B0 NACAP3-201ENST00000552100 481 ntBASIC3.4□□□□□ -1.87
CTDP1Q9Y5B0 AC007318.2-201ENST00000620999 243 ntBASIC3.4□□□□□ -1.87
CTDP1Q9Y5B0 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.4□□□□□ -1.87
CTDP1Q9Y5B0 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CTDP1Q9Y5B0 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CTDP1Q9Y5B0 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.4□□□□□ -1.87
CTDP1Q9Y5B0 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.4□□□□□ -1.87
CTDP1Q9Y5B0 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.4□□□□□ -1.87
CTDP1Q9Y5B0 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
CTDP1Q9Y5B0 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
CTDP1Q9Y5B0 LINC02555-201ENST00000563933 1951 ntBASIC3.4□□□□□ -1.87
CTDP1Q9Y5B0 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
CTDP1Q9Y5B0 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
CTDP1Q9Y5B0 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CTDP1Q9Y5B0 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.39□□□□□ -1.87
CTDP1Q9Y5B0 RNU6-1301P-201ENST00000362724 104 ntBASIC3.39□□□□□ -1.87
CTDP1Q9Y5B0 SNORD115-32-201ENST00000364079 82 ntBASIC3.39□□□□□ -1.87
CTDP1Q9Y5B0 RNU6-843P-201ENST00000384454 104 ntBASIC3.39□□□□□ -1.87
CTDP1Q9Y5B0 MIR153-2-201ENST00000385225 87 ntBASIC3.39□□□□□ -1.87
CTDP1Q9Y5B0 MIR767-201ENST00000390228 109 ntBASIC3.39□□□□□ -1.87
CTDP1Q9Y5B0 SNORD115-46-201ENST00000390982 71 ntBASIC3.39□□□□□ -1.87
CTDP1Q9Y5B0 FTH1P15-201ENST00000406984 280 ntBASIC3.39□□□□□ -1.87
CTDP1Q9Y5B0 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.39□□□□□ -1.87
CTDP1Q9Y5B0 AC087477.1-201ENST00000465747 340 ntBASIC3.39□□□□□ -1.87
CTDP1Q9Y5B0 RNU1-143P-201ENST00000516296 146 ntBASIC3.39□□□□□ -1.87
CTDP1Q9Y5B0 AC104027.1-201ENST00000521887 300 ntBASIC3.39□□□□□ -1.87
CTDP1Q9Y5B0 AC136932.1-201ENST00000574771 208 ntBASIC3.39□□□□□ -1.87
CTDP1Q9Y5B0 MIR4300-201ENST00000581016 96 ntBASIC3.39□□□□□ -1.87
CTDP1Q9Y5B0 AC006023.1-201ENST00000603944 259 ntBASIC3.39□□□□□ -1.87
CTDP1Q9Y5B0 AL356157.2-201ENST00000605122 111 ntBASIC3.39□□□□□ -1.87
CTDP1Q9Y5B0 U1.23-201ENST00000610293 146 ntBASIC3.39□□□□□ -1.87
CTDP1Q9Y5B0 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.39□□□□□ -1.87
CTDP1Q9Y5B0 RNU1-68P-201ENST00000615382 146 ntBASIC3.39□□□□□ -1.87
CTDP1Q9Y5B0 AC240442.1-201ENST00000616055 283 ntBASIC3.39□□□□□ -1.87
CTDP1Q9Y5B0 AP001282.2-201ENST00000616149 309 ntBASIC3.39□□□□□ -1.87
CTDP1Q9Y5B0 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.39□□□□□ -1.87
CTDP1Q9Y5B0 U1.39-201ENST00000621562 146 ntBASIC3.39□□□□□ -1.87
CTDP1Q9Y5B0 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CTDP1Q9Y5B0 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CTDP1Q9Y5B0 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.39□□□□□ -1.87
CTDP1Q9Y5B0 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CTDP1Q9Y5B0 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
CTDP1Q9Y5B0 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CTDP1Q9Y5B0 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.38□□□□□ -1.87
CTDP1Q9Y5B0 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CTDP1Q9Y5B0 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CTDP1Q9Y5B0 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CTDP1Q9Y5B0 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
CTDP1Q9Y5B0 AL391987.6-201ENST00000305671 199 ntBASIC3.38□□□□□ -1.87
CTDP1Q9Y5B0 AC073325.2-201ENST00000339545 159 ntBASIC3.38□□□□□ -1.87
CTDP1Q9Y5B0 snoU2_19.2-201ENST00000363024 80 ntBASIC3.38□□□□□ -1.87
CTDP1Q9Y5B0 SNORD56.3-201ENST00000363507 71 ntBASIC3.38□□□□□ -1.87
CTDP1Q9Y5B0 SNORD27-201ENST00000363981 72 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms