Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 RN7SKP49-201ENST00000516675 260 ntBASIC3.59□□□□□ -1.83
R3HCC1Q9Y3T6 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.59□□□□□ -1.83
R3HCC1Q9Y3T6 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.59□□□□□ -1.83
R3HCC1Q9Y3T6 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
R3HCC1Q9Y3T6 uc_338.1-201ENST00000612113 180 ntBASIC3.59□□□□□ -1.83
R3HCC1Q9Y3T6 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
R3HCC1Q9Y3T6 AL049781.1-201ENST00000623195 3585 ntBASIC3.58□□□□□ -1.84
R3HCC1Q9Y3T6 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
R3HCC1Q9Y3T6 RNU6-486P-201ENST00000363116 107 ntBASIC3.58□□□□□ -1.84
R3HCC1Q9Y3T6 Y_RNA.183-201ENST00000363882 113 ntBASIC3.58□□□□□ -1.84
R3HCC1Q9Y3T6 SNORA68.1-201ENST00000364537 132 ntBASIC3.58□□□□□ -1.84
R3HCC1Q9Y3T6 RNU6-1145P-201ENST00000384246 107 ntBASIC3.58□□□□□ -1.84
R3HCC1Q9Y3T6 AL079342.1-201ENST00000401460 267 ntBASIC3.58□□□□□ -1.84
R3HCC1Q9Y3T6 AL031121.1-201ENST00000406553 254 ntBASIC3.58□□□□□ -1.84
R3HCC1Q9Y3T6 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.58□□□□□ -1.84
R3HCC1Q9Y3T6 RPL30P4-201ENST00000429309 333 ntBASIC3.58□□□□□ -1.84
R3HCC1Q9Y3T6 AC112220.1-201ENST00000434628 355 ntBASIC3.58□□□□□ -1.84
R3HCC1Q9Y3T6 AC010095.1-201ENST00000443543 144 ntBASIC3.58□□□□□ -1.84
R3HCC1Q9Y3T6 LINC01399-202ENST00000458450 244 ntBASIC3.58□□□□□ -1.84
R3HCC1Q9Y3T6 AC140059.1-201ENST00000489238 361 ntBASIC3.58□□□□□ -1.84
R3HCC1Q9Y3T6 SNORA25.14-201ENST00000516481 132 ntBASIC3.58□□□□□ -1.84
R3HCC1Q9Y3T6 AC078899.3-201ENST00000599065 212 ntBASIC3.58□□□□□ -1.84
R3HCC1Q9Y3T6 AC107871.2-201ENST00000612894 502 ntBASIC3.58□□□□□ -1.84
R3HCC1Q9Y3T6 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.58□□□□□ -1.84
R3HCC1Q9Y3T6 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.58□□□□□ -1.84
R3HCC1Q9Y3T6 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.58□□□□□ -1.84
R3HCC1Q9Y3T6 MIR8062-201ENST00000621515 85 ntBASIC3.58□□□□□ -1.84
R3HCC1Q9Y3T6 AC130454.1-201ENST00000622948 401 ntBASIC3.58□□□□□ -1.84
R3HCC1Q9Y3T6 AC018692.3-201ENST00000623929 123 ntBASIC3.58□□□□□ -1.84
R3HCC1Q9Y3T6 AC069528.2-201ENST00000624849 1991 ntBASIC3.58□□□□□ -1.84
R3HCC1Q9Y3T6 AC099654.7-201ENST00000635788 2127 ntBASIC3.58□□□□□ -1.84
R3HCC1Q9Y3T6 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.58□□□□□ -1.84
R3HCC1Q9Y3T6 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
R3HCC1Q9Y3T6 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
R3HCC1Q9Y3T6 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
R3HCC1Q9Y3T6 RNU6-280P-201ENST00000364145 104 ntBASIC3.57□□□□□ -1.84
R3HCC1Q9Y3T6 RNA5SP267-201ENST00000364893 126 ntBASIC3.57□□□□□ -1.84
R3HCC1Q9Y3T6 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
R3HCC1Q9Y3T6 Y_RNA.396-201ENST00000383949 103 ntBASIC3.57□□□□□ -1.84
R3HCC1Q9Y3T6 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.57□□□□□ -1.84
R3HCC1Q9Y3T6 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.57□□□□□ -1.84
R3HCC1Q9Y3T6 SEM1P1-201ENST00000506694 209 ntBASIC3.57□□□□□ -1.84
R3HCC1Q9Y3T6 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.57□□□□□ -1.84
R3HCC1Q9Y3T6 EIF4A1P12-201ENST00000551910 141 ntBASIC3.57□□□□□ -1.84
R3HCC1Q9Y3T6 AC103988.1-201ENST00000566382 2177 ntBASIC3.57□□□□□ -1.84
R3HCC1Q9Y3T6 AC136932.1-201ENST00000574771 208 ntBASIC3.57□□□□□ -1.84
R3HCC1Q9Y3T6 AC073657.2-201ENST00000605661 303 ntBASIC3.57□□□□□ -1.84
R3HCC1Q9Y3T6 AL357075.2-201ENST00000614906 189 ntBASIC3.57□□□□□ -1.84
R3HCC1Q9Y3T6 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
R3HCC1Q9Y3T6 Y_RNA.143-201ENST00000363520 106 ntBASIC3.56□□□□□ -1.84
R3HCC1Q9Y3T6 U3.9-201ENST00000363823 204 ntBASIC3.56□□□□□ -1.84
R3HCC1Q9Y3T6 SNORA38.1-201ENST00000364172 131 ntBASIC3.56□□□□□ -1.84
R3HCC1Q9Y3T6 SNORD21-201ENST00000383953 95 ntBASIC3.56□□□□□ -1.84
R3HCC1Q9Y3T6 Y_RNA.439-201ENST00000384119 94 ntBASIC3.56□□□□□ -1.84
R3HCC1Q9Y3T6 RNU6-472P-201ENST00000384299 107 ntBASIC3.56□□□□□ -1.84
R3HCC1Q9Y3T6 RNVU1-14-201ENST00000384770 164 ntBASIC3.56□□□□□ -1.84
R3HCC1Q9Y3T6 MIR218-1-201ENST00000384999 110 ntBASIC3.56□□□□□ -1.84
R3HCC1Q9Y3T6 MIR1289-1-201ENST00000408836 144 ntBASIC3.56□□□□□ -1.84
R3HCC1Q9Y3T6 RPL21P38-201ENST00000418090 167 ntBASIC3.56□□□□□ -1.84
R3HCC1Q9Y3T6 RPL27AP5-201ENST00000469428 449 ntBASIC3.56□□□□□ -1.84
R3HCC1Q9Y3T6 RN7SL807P-201ENST00000470923 297 ntBASIC3.56□□□□□ -1.84
R3HCC1Q9Y3T6 AC098869.1-201ENST00000481627 292 ntBASIC3.56□□□□□ -1.84
R3HCC1Q9Y3T6 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.56□□□□□ -1.84
R3HCC1Q9Y3T6 DEFB131C-201ENST00000528817 165 ntBASIC3.56□□□□□ -1.84
R3HCC1Q9Y3T6 AC004817.2-201ENST00000561794 651 ntBASIC3.56□□□□□ -1.84
R3HCC1Q9Y3T6 MZT1P2-201ENST00000604387 248 ntBASIC3.56□□□□□ -1.84
R3HCC1Q9Y3T6 AC010999.1-201ENST00000611856 324 ntBASIC3.56□□□□□ -1.84
R3HCC1Q9Y3T6 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.56□□□□□ -1.84
R3HCC1Q9Y3T6 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
R3HCC1Q9Y3T6 AC026241.1-201ENST00000517873 2142 ntBASIC3.55□□□□□ -1.84
R3HCC1Q9Y3T6 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.55□□□□□ -1.84
R3HCC1Q9Y3T6 RNU6-702P-201ENST00000364982 107 ntBASIC3.55□□□□□ -1.84
R3HCC1Q9Y3T6 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
R3HCC1Q9Y3T6 RNU6-713P-201ENST00000384761 107 ntBASIC3.55□□□□□ -1.84
R3HCC1Q9Y3T6 SNORA26.7-201ENST00000391288 122 ntBASIC3.55□□□□□ -1.84
R3HCC1Q9Y3T6 RNU2-20P-201ENST00000410425 191 ntBASIC3.55□□□□□ -1.84
R3HCC1Q9Y3T6 AC004866.1-201ENST00000411748 78 ntBASIC3.55□□□□□ -1.84
R3HCC1Q9Y3T6 MICF-203ENST00000432679 129 ntBASIC3.55□□□□□ -1.84
R3HCC1Q9Y3T6 PCNPP5-201ENST00000452246 481 ntBASIC3.55□□□□□ -1.84
R3HCC1Q9Y3T6 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.55□□□□□ -1.84
R3HCC1Q9Y3T6 AC025465.3-201ENST00000510570 311 ntBASIC3.55□□□□□ -1.84
R3HCC1Q9Y3T6 RN7SKP43-201ENST00000516173 320 ntBASIC3.55□□□□□ -1.84
R3HCC1Q9Y3T6 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.55□□□□□ -1.84
R3HCC1Q9Y3T6 AC010620.2-201ENST00000600135 313 ntBASIC3.55□□□□□ -1.84
R3HCC1Q9Y3T6 AL356575.1-201ENST00000603008 283 ntBASIC3.55□□□□□ -1.84
R3HCC1Q9Y3T6 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.55□□□□□ -1.84
R3HCC1Q9Y3T6 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
R3HCC1Q9Y3T6 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
R3HCC1Q9Y3T6 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
R3HCC1Q9Y3T6 MT-TW-201ENST00000387382 68 ntBASIC3.54□□□□□ -1.84
R3HCC1Q9Y3T6 MRPL35P1-201ENST00000404272 572 ntBASIC3.54□□□□□ -1.84
R3HCC1Q9Y3T6 RNA5SP120-201ENST00000410900 112 ntBASIC3.54□□□□□ -1.84
R3HCC1Q9Y3T6 AC027124.2-201ENST00000428249 105 ntBASIC3.54□□□□□ -1.84
R3HCC1Q9Y3T6 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.54□□□□□ -1.84
R3HCC1Q9Y3T6 AC008155.2-201ENST00000464337 397 ntBASIC3.54□□□□□ -1.84
R3HCC1Q9Y3T6 RPL26P26-201ENST00000480251 434 ntBASIC3.54□□□□□ -1.84
R3HCC1Q9Y3T6 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
R3HCC1Q9Y3T6 AP003733.2-201ENST00000529409 171 ntBASIC3.54□□□□□ -1.84
R3HCC1Q9Y3T6 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.54□□□□□ -1.84
R3HCC1Q9Y3T6 AC027176.1-201ENST00000560204 514 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 177.3 ms