Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 U6.98-201ENST00000637157 84 ntBASIC4.68□□□□□ -1.66
ZC3H4Q9UPT8 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.68□□□□□ -1.66
ZC3H4Q9UPT8 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
ZC3H4Q9UPT8 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
ZC3H4Q9UPT8 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.67□□□□□ -1.66
ZC3H4Q9UPT8 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
ZC3H4Q9UPT8 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
ZC3H4Q9UPT8 Y_RNA.71-201ENST00000362892 104 ntBASIC4.67□□□□□ -1.66
ZC3H4Q9UPT8 SNORA38.1-201ENST00000364172 131 ntBASIC4.67□□□□□ -1.66
ZC3H4Q9UPT8 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.67□□□□□ -1.66
ZC3H4Q9UPT8 AL161651.1-201ENST00000440882 223 ntBASIC4.67□□□□□ -1.66
ZC3H4Q9UPT8 RNU5F-2P-201ENST00000516066 82 ntBASIC4.67□□□□□ -1.66
ZC3H4Q9UPT8 RNU7-121P-201ENST00000516604 62 ntBASIC4.67□□□□□ -1.66
ZC3H4Q9UPT8 AC136628.3-201ENST00000521868 290 ntBASIC4.67□□□□□ -1.66
ZC3H4Q9UPT8 AC090877.1-201ENST00000561418 344 ntBASIC4.67□□□□□ -1.66
ZC3H4Q9UPT8 AL034555.1-201ENST00000604816 211 ntBASIC4.67□□□□□ -1.66
ZC3H4Q9UPT8 AL078604.3-201ENST00000615580 211 ntBASIC4.67□□□□□ -1.66
ZC3H4Q9UPT8 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
ZC3H4Q9UPT8 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.67□□□□□ -1.66
ZC3H4Q9UPT8 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.67□□□□□ -1.66
ZC3H4Q9UPT8 AC018555.1-201ENST00000567548 1980 ntBASIC4.67□□□□□ -1.66
ZC3H4Q9UPT8 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
ZC3H4Q9UPT8 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
ZC3H4Q9UPT8 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ZC3H4Q9UPT8 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
ZC3H4Q9UPT8 AC091152.2-201ENST00000591628 2569 ntBASIC4.66□□□□□ -1.66
ZC3H4Q9UPT8 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.66□□□□□ -1.66
ZC3H4Q9UPT8 AL391516.1-201ENST00000554380 2449 ntBASIC4.66□□□□□ -1.66
ZC3H4Q9UPT8 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ZC3H4Q9UPT8 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.66□□□□□ -1.66
ZC3H4Q9UPT8 RNU6-899P-201ENST00000363947 107 ntBASIC4.66□□□□□ -1.66
ZC3H4Q9UPT8 snoU2_19.4-201ENST00000364329 80 ntBASIC4.66□□□□□ -1.66
ZC3H4Q9UPT8 AL031003.1-201ENST00000404229 172 ntBASIC4.66□□□□□ -1.66
ZC3H4Q9UPT8 AC006461.1-201ENST00000412637 326 ntBASIC4.66□□□□□ -1.66
ZC3H4Q9UPT8 AC017083.1-201ENST00000428093 483 ntBASIC4.66□□□□□ -1.66
ZC3H4Q9UPT8 AL135790.2-201ENST00000437701 267 ntBASIC4.66□□□□□ -1.66
ZC3H4Q9UPT8 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC4.66□□□□□ -1.66
ZC3H4Q9UPT8 AC025554.1-201ENST00000505641 188 ntBASIC4.66□□□□□ -1.66
ZC3H4Q9UPT8 AC027176.1-201ENST00000560204 514 ntBASIC4.66□□□□□ -1.66
ZC3H4Q9UPT8 SNORD11B-201ENST00000607707 90 ntBASIC4.66□□□□□ -1.66
ZC3H4Q9UPT8 AC018692.3-201ENST00000623929 123 ntBASIC4.66□□□□□ -1.66
ZC3H4Q9UPT8 AC008873.1-201ENST00000625051 138 ntBASIC4.66□□□□□ -1.66
ZC3H4Q9UPT8 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
ZC3H4Q9UPT8 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
ZC3H4Q9UPT8 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
ZC3H4Q9UPT8 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
ZC3H4Q9UPT8 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.65□□□□□ -1.66
ZC3H4Q9UPT8 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.65□□□□□ -1.67
ZC3H4Q9UPT8 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.65□□□□□ -1.67
ZC3H4Q9UPT8 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
ZC3H4Q9UPT8 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.65□□□□□ -1.67
ZC3H4Q9UPT8 Y_RNA.24-201ENST00000362508 103 ntBASIC4.65□□□□□ -1.67
ZC3H4Q9UPT8 SNORD116-14-201ENST00000383894 92 ntBASIC4.65□□□□□ -1.67
ZC3H4Q9UPT8 SNORD116-17-201ENST00000383929 92 ntBASIC4.65□□□□□ -1.67
ZC3H4Q9UPT8 SNORD116-15-201ENST00000384445 92 ntBASIC4.65□□□□□ -1.67
ZC3H4Q9UPT8 SNORD116-19-201ENST00000384729 92 ntBASIC4.65□□□□□ -1.67
ZC3H4Q9UPT8 Y_RNA.572-201ENST00000384757 98 ntBASIC4.65□□□□□ -1.67
ZC3H4Q9UPT8 SNORA48.5-201ENST00000391143 135 ntBASIC4.65□□□□□ -1.67
ZC3H4Q9UPT8 AC027124.2-201ENST00000428249 105 ntBASIC4.65□□□□□ -1.67
ZC3H4Q9UPT8 AC074290.1-201ENST00000448883 135 ntBASIC4.65□□□□□ -1.67
ZC3H4Q9UPT8 RBMY2UP-201ENST00000453474 324 ntBASIC4.65□□□□□ -1.67
ZC3H4Q9UPT8 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.65□□□□□ -1.67
ZC3H4Q9UPT8 AC146507.2-201ENST00000460608 476 ntBASIC4.65□□□□□ -1.67
ZC3H4Q9UPT8 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.65□□□□□ -1.67
ZC3H4Q9UPT8 RNU6-919P-201ENST00000516731 104 ntBASIC4.65□□□□□ -1.67
ZC3H4Q9UPT8 AC109810.1-201ENST00000534066 224 ntBASIC4.65□□□□□ -1.67
ZC3H4Q9UPT8 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.65□□□□□ -1.67
ZC3H4Q9UPT8 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.65□□□□□ -1.67
ZC3H4Q9UPT8 MIR4325-201ENST00000583049 90 ntBASIC4.65□□□□□ -1.67
ZC3H4Q9UPT8 HMGN2P15-201ENST00000585707 270 ntBASIC4.65□□□□□ -1.67
ZC3H4Q9UPT8 AC244505.7-201ENST00000599675 272 ntBASIC4.65□□□□□ -1.67
ZC3H4Q9UPT8 Y_RNA.802-201ENST00000614892 130 ntBASIC4.65□□□□□ -1.67
ZC3H4Q9UPT8 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.65□□□□□ -1.67
ZC3H4Q9UPT8 AC110774.1-201ENST00000623567 2018 ntBASIC4.65□□□□□ -1.67
ZC3H4Q9UPT8 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
ZC3H4Q9UPT8 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
ZC3H4Q9UPT8 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.65□□□□□ -1.67
ZC3H4Q9UPT8 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.67
ZC3H4Q9UPT8 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
ZC3H4Q9UPT8 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
ZC3H4Q9UPT8 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
ZC3H4Q9UPT8 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
ZC3H4Q9UPT8 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.64□□□□□ -1.67
ZC3H4Q9UPT8 RNU6-270P-201ENST00000364131 105 ntBASIC4.64□□□□□ -1.67
ZC3H4Q9UPT8 Y_RNA.420-201ENST00000384043 110 ntBASIC4.64□□□□□ -1.67
ZC3H4Q9UPT8 MIR1251-201ENST00000408552 70 ntBASIC4.64□□□□□ -1.67
ZC3H4Q9UPT8 RNU6-855P-201ENST00000410395 104 ntBASIC4.64□□□□□ -1.67
ZC3H4Q9UPT8 AC006445.2-201ENST00000510061 472 ntBASIC4.64□□□□□ -1.67
ZC3H4Q9UPT8 XIST_intron.1-201ENST00000619444 68 ntBASIC4.64□□□□□ -1.67
ZC3H4Q9UPT8 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.64□□□□□ -1.67
ZC3H4Q9UPT8 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.64□□□□□ -1.67
ZC3H4Q9UPT8 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
ZC3H4Q9UPT8 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
ZC3H4Q9UPT8 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
ZC3H4Q9UPT8 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
ZC3H4Q9UPT8 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.63□□□□□ -1.67
ZC3H4Q9UPT8 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
ZC3H4Q9UPT8 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
ZC3H4Q9UPT8 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
ZC3H4Q9UPT8 Y_RNA.337-201ENST00000365312 102 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms