Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.23□□□□□ -1.89
USP25Q9UHP3 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.23□□□□□ -1.89
USP25Q9UHP3 AC243964.1-201ENST00000441814 261 ntBASIC3.23□□□□□ -1.89
USP25Q9UHP3 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.23□□□□□ -1.89
USP25Q9UHP3 AC083906.5-201ENST00000503722 328 ntBASIC3.23□□□□□ -1.89
USP25Q9UHP3 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.23□□□□□ -1.89
USP25Q9UHP3 MIR3670-2-201ENST00000582974 65 ntBASIC3.23□□□□□ -1.89
USP25Q9UHP3 MIR3670-1-201ENST00000584160 65 ntBASIC3.23□□□□□ -1.89
USP25Q9UHP3 MIR3670-3-201ENST00000584855 65 ntBASIC3.23□□□□□ -1.89
USP25Q9UHP3 AL356280.1-201ENST00000603614 379 ntBASIC3.23□□□□□ -1.89
USP25Q9UHP3 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.23□□□□□ -1.89
USP25Q9UHP3 RAC1P9-201ENST00000604990 392 ntBASIC3.23□□□□□ -1.89
USP25Q9UHP3 MIR3670-4-201ENST00000612260 65 ntBASIC3.23□□□□□ -1.89
USP25Q9UHP3 AL159153.1-201ENST00000619688 317 ntBASIC3.23□□□□□ -1.89
USP25Q9UHP3 MIR8062-201ENST00000621515 85 ntBASIC3.23□□□□□ -1.89
USP25Q9UHP3 SCARNA15.3-201ENST00000626315 122 ntBASIC3.23□□□□□ -1.89
USP25Q9UHP3 SCARNA4.1-201ENST00000628597 123 ntBASIC3.23□□□□□ -1.89
USP25Q9UHP3 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
USP25Q9UHP3 Y_RNA.188-201ENST00000363952 111 ntBASIC3.22□□□□□ -1.89
USP25Q9UHP3 SNORA51.11-201ENST00000384442 131 ntBASIC3.22□□□□□ -1.89
USP25Q9UHP3 MIR128-1-201ENST00000384921 82 ntBASIC3.22□□□□□ -1.89
USP25Q9UHP3 AL358453.1-201ENST00000422522 250 ntBASIC3.22□□□□□ -1.89
USP25Q9UHP3 CBX3P6-201ENST00000430257 527 ntBASIC3.22□□□□□ -1.89
USP25Q9UHP3 AL445687.1-201ENST00000439946 251 ntBASIC3.22□□□□□ -1.89
USP25Q9UHP3 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.22□□□□□ -1.89
USP25Q9UHP3 OR2AQ1P-201ENST00000451972 200 ntBASIC3.22□□□□□ -1.89
USP25Q9UHP3 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.22□□□□□ -1.89
USP25Q9UHP3 SNORA25.11-201ENST00000515935 105 ntBASIC3.22□□□□□ -1.89
USP25Q9UHP3 RNU6-794P-201ENST00000517261 64 ntBASIC3.22□□□□□ -1.89
USP25Q9UHP3 AC091144.1-201ENST00000519573 138 ntBASIC3.22□□□□□ -1.89
USP25Q9UHP3 AC034114.1-201ENST00000520293 285 ntBASIC3.22□□□□□ -1.89
USP25Q9UHP3 AC004486.1-201ENST00000546846 233 ntBASIC3.22□□□□□ -1.89
USP25Q9UHP3 MIR3605-201ENST00000583214 100 ntBASIC3.22□□□□□ -1.89
USP25Q9UHP3 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.22□□□□□ -1.89
USP25Q9UHP3 AL390123.1-201ENST00000603216 237 ntBASIC3.22□□□□□ -1.89
USP25Q9UHP3 AC073410.2-201ENST00000603240 332 ntBASIC3.22□□□□□ -1.89
USP25Q9UHP3 AC069294.1-201ENST00000608397 350 ntBASIC3.22□□□□□ -1.89
USP25Q9UHP3 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.22□□□□□ -1.89
USP25Q9UHP3 SCARNA4-201ENST00000629045 128 ntBASIC3.22□□□□□ -1.89
USP25Q9UHP3 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
USP25Q9UHP3 AC002543.1-201ENST00000299783 1954 ntBASIC3.21□□□□□ -1.89
USP25Q9UHP3 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
USP25Q9UHP3 AP000560.1-201ENST00000624150 1937 ntBASIC3.21□□□□□ -1.9
USP25Q9UHP3 RNU4-9P-201ENST00000364951 139 ntBASIC3.21□□□□□ -1.9
USP25Q9UHP3 Y_RNA.405-201ENST00000383979 100 ntBASIC3.21□□□□□ -1.9
USP25Q9UHP3 Y_RNA.451-201ENST00000384200 100 ntBASIC3.21□□□□□ -1.9
USP25Q9UHP3 Y_RNA.524-201ENST00000384564 100 ntBASIC3.21□□□□□ -1.9
USP25Q9UHP3 Y_RNA.561-201ENST00000384694 100 ntBASIC3.21□□□□□ -1.9
USP25Q9UHP3 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
USP25Q9UHP3 RNU6-1140P-201ENST00000410517 106 ntBASIC3.21□□□□□ -1.9
USP25Q9UHP3 EIF1AXP1-201ENST00000419267 435 ntBASIC3.21□□□□□ -1.9
USP25Q9UHP3 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.21□□□□□ -1.9
USP25Q9UHP3 RPL23AP95-201ENST00000426806 265 ntBASIC3.21□□□□□ -1.9
USP25Q9UHP3 DYNLT3P2-201ENST00000442517 295 ntBASIC3.21□□□□□ -1.9
USP25Q9UHP3 AC080013.2-201ENST00000460866 323 ntBASIC3.21□□□□□ -1.9
USP25Q9UHP3 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.21□□□□□ -1.9
USP25Q9UHP3 AC003982.1-202ENST00000469928 248 ntBASIC3.21□□□□□ -1.9
USP25Q9UHP3 RNU7-175P-201ENST00000515915 61 ntBASIC3.21□□□□□ -1.9
USP25Q9UHP3 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.21□□□□□ -1.9
USP25Q9UHP3 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.21□□□□□ -1.9
USP25Q9UHP3 AC090616.3-201ENST00000582184 217 ntBASIC3.21□□□□□ -1.9
USP25Q9UHP3 RPS29P30-201ENST00000600975 111 ntBASIC3.21□□□□□ -1.9
USP25Q9UHP3 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.21□□□□□ -1.9
USP25Q9UHP3 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.21□□□□□ -1.9
USP25Q9UHP3 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
USP25Q9UHP3 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.21□□□□□ -1.9
USP25Q9UHP3 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.21□□□□□ -1.9
USP25Q9UHP3 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.2□□□□□ -1.9
USP25Q9UHP3 AC009541.1-201ENST00000438279 2662 ntBASIC3.2□□□□□ -1.9
USP25Q9UHP3 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
USP25Q9UHP3 MIR26A1-201ENST00000362205 77 ntBASIC3.2□□□□□ -1.9
USP25Q9UHP3 Y_RNA.27-201ENST00000362540 103 ntBASIC3.2□□□□□ -1.9
USP25Q9UHP3 Y_RNA.214-201ENST00000364201 112 ntBASIC3.2□□□□□ -1.9
USP25Q9UHP3 SNORD32A-201ENST00000364805 84 ntBASIC3.2□□□□□ -1.9
USP25Q9UHP3 RNU6-472P-201ENST00000384299 107 ntBASIC3.2□□□□□ -1.9
USP25Q9UHP3 RNU1-57P-201ENST00000384491 166 ntBASIC3.2□□□□□ -1.9
USP25Q9UHP3 Y_RNA.512-201ENST00000384518 102 ntBASIC3.2□□□□□ -1.9
USP25Q9UHP3 RNU6-713P-201ENST00000384761 107 ntBASIC3.2□□□□□ -1.9
USP25Q9UHP3 MIR544A-201ENST00000384855 91 ntBASIC3.2□□□□□ -1.9
USP25Q9UHP3 SNORA48.5-201ENST00000391143 135 ntBASIC3.2□□□□□ -1.9
USP25Q9UHP3 RNU2-25P-201ENST00000411041 191 ntBASIC3.2□□□□□ -1.9
USP25Q9UHP3 ELOCP20-201ENST00000422460 345 ntBASIC3.2□□□□□ -1.9
USP25Q9UHP3 AL031659.1-201ENST00000447075 539 ntBASIC3.2□□□□□ -1.9
USP25Q9UHP3 RPL39P29-201ENST00000447779 157 ntBASIC3.2□□□□□ -1.9
USP25Q9UHP3 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.2□□□□□ -1.9
USP25Q9UHP3 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.2□□□□□ -1.9
USP25Q9UHP3 AC090525.1-201ENST00000479116 478 ntBASIC3.2□□□□□ -1.9
USP25Q9UHP3 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.2□□□□□ -1.9
USP25Q9UHP3 RNU6-1143P-201ENST00000516125 104 ntBASIC3.2□□□□□ -1.9
USP25Q9UHP3 Y_RNA.706-201ENST00000516933 99 ntBASIC3.2□□□□□ -1.9
USP25Q9UHP3 MIR2355-201ENST00000517199 87 ntBASIC3.2□□□□□ -1.9
USP25Q9UHP3 RN7SKP40-201ENST00000517211 242 ntBASIC3.2□□□□□ -1.9
USP25Q9UHP3 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.2□□□□□ -1.9
USP25Q9UHP3 AC016256.1-201ENST00000547971 354 ntBASIC3.2□□□□□ -1.9
USP25Q9UHP3 AC027176.1-201ENST00000560204 514 ntBASIC3.2□□□□□ -1.9
USP25Q9UHP3 AC090517.1-201ENST00000569307 266 ntBASIC3.2□□□□□ -1.9
USP25Q9UHP3 AC105245.1-201ENST00000581934 244 ntBASIC3.2□□□□□ -1.9
USP25Q9UHP3 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.2□□□□□ -1.9
USP25Q9UHP3 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
USP25Q9UHP3 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 164.2 ms