Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 SNORD114-7-201ENST00000362520 77 ntBASIC4.22□□□□□ -1.73
CUEDC1Q9NWM3 Y_RNA.388-201ENST00000383919 113 ntBASIC4.22□□□□□ -1.73
CUEDC1Q9NWM3 RNU6-19P-201ENST00000384718 107 ntBASIC4.22□□□□□ -1.73
CUEDC1Q9NWM3 MIR3065-201ENST00000390137 79 ntBASIC4.22□□□□□ -1.73
CUEDC1Q9NWM3 SNORD72-201ENST00000390994 80 ntBASIC4.22□□□□□ -1.73
CUEDC1Q9NWM3 SNORA11.1-201ENST00000408133 129 ntBASIC4.22□□□□□ -1.73
CUEDC1Q9NWM3 CYCSP48-201ENST00000417124 323 ntBASIC4.22□□□□□ -1.73
CUEDC1Q9NWM3 AC011998.1-201ENST00000433403 117 ntBASIC4.22□□□□□ -1.73
CUEDC1Q9NWM3 RPL39P40-201ENST00000445481 146 ntBASIC4.22□□□□□ -1.73
CUEDC1Q9NWM3 PHBP16-201ENST00000446318 950 ntBASIC4.22□□□□□ -1.73
CUEDC1Q9NWM3 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC4.22□□□□□ -1.73
CUEDC1Q9NWM3 RPL35AP15-201ENST00000468042 339 ntBASIC4.22□□□□□ -1.73
CUEDC1Q9NWM3 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.22□□□□□ -1.73
CUEDC1Q9NWM3 RNU6-581P-201ENST00000516214 105 ntBASIC4.22□□□□□ -1.73
CUEDC1Q9NWM3 RNU6-197P-201ENST00000516680 100 ntBASIC4.22□□□□□ -1.73
CUEDC1Q9NWM3 CYCSP29-201ENST00000533731 318 ntBASIC4.22□□□□□ -1.73
CUEDC1Q9NWM3 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.22□□□□□ -1.73
CUEDC1Q9NWM3 RPL23AP97-201ENST00000568955 471 ntBASIC4.22□□□□□ -1.73
CUEDC1Q9NWM3 RPL30P11-203ENST00000598995 310 ntBASIC4.22□□□□□ -1.73
CUEDC1Q9NWM3 AC079587.1-201ENST00000603846 277 ntBASIC4.22□□□□□ -1.73
CUEDC1Q9NWM3 AC006133.1-201ENST00000617106 264 ntBASIC4.22□□□□□ -1.73
CUEDC1Q9NWM3 MIR548AY-201ENST00000617669 107 ntBASIC4.22□□□□□ -1.73
CUEDC1Q9NWM3 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CUEDC1Q9NWM3 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CUEDC1Q9NWM3 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
CUEDC1Q9NWM3 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.22□□□□□ -1.73
CUEDC1Q9NWM3 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CUEDC1Q9NWM3 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CUEDC1Q9NWM3 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.22□□□□□ -1.73
CUEDC1Q9NWM3 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
CUEDC1Q9NWM3 UBE3AP2-201ENST00000429033 2259 ntBASIC4.21□□□□□ -1.73
CUEDC1Q9NWM3 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
CUEDC1Q9NWM3 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CUEDC1Q9NWM3 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CUEDC1Q9NWM3 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CUEDC1Q9NWM3 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CUEDC1Q9NWM3 RNU6-978P-201ENST00000364371 103 ntBASIC4.21□□□□□ -1.74
CUEDC1Q9NWM3 SNORA62.3-201ENST00000365110 153 ntBASIC4.21□□□□□ -1.74
CUEDC1Q9NWM3 Y_RNA.348-201ENST00000365403 103 ntBASIC4.21□□□□□ -1.74
CUEDC1Q9NWM3 U1.1-201ENST00000384101 164 ntBASIC4.21□□□□□ -1.74
CUEDC1Q9NWM3 MIR548A1-201ENST00000385041 97 ntBASIC4.21□□□□□ -1.74
CUEDC1Q9NWM3 EI24P2-201ENST00000397776 1076 ntBASIC4.21□□□□□ -1.74
CUEDC1Q9NWM3 U6atac.2-201ENST00000408644 118 ntBASIC4.21□□□□□ -1.74
CUEDC1Q9NWM3 MIR1278-201ENST00000408753 81 ntBASIC4.21□□□□□ -1.74
CUEDC1Q9NWM3 Y_RNA.622-201ENST00000411091 108 ntBASIC4.21□□□□□ -1.74
CUEDC1Q9NWM3 AC245291.1-201ENST00000419501 328 ntBASIC4.21□□□□□ -1.74
CUEDC1Q9NWM3 HSPE1P21-201ENST00000438283 308 ntBASIC4.21□□□□□ -1.74
CUEDC1Q9NWM3 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.21□□□□□ -1.74
CUEDC1Q9NWM3 RN7SL98P-201ENST00000462271 300 ntBASIC4.21□□□□□ -1.74
CUEDC1Q9NWM3 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.21□□□□□ -1.74
CUEDC1Q9NWM3 RNU7-115P-201ENST00000516433 55 ntBASIC4.21□□□□□ -1.74
CUEDC1Q9NWM3 SNORA67.7-201ENST00000516664 135 ntBASIC4.21□□□□□ -1.74
CUEDC1Q9NWM3 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CUEDC1Q9NWM3 MIR4444-1-201ENST00000581696 74 ntBASIC4.21□□□□□ -1.74
CUEDC1Q9NWM3 MIR3158-1-201ENST00000583596 81 ntBASIC4.21□□□□□ -1.74
CUEDC1Q9NWM3 MIR4444-2-201ENST00000584390 74 ntBASIC4.21□□□□□ -1.74
CUEDC1Q9NWM3 TCL6_2.1-201ENST00000615162 119 ntBASIC4.21□□□□□ -1.74
CUEDC1Q9NWM3 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.21□□□□□ -1.74
CUEDC1Q9NWM3 AC010680.1-201ENST00000590024 3590 ntBASIC4.21□□□□□ -1.74
CUEDC1Q9NWM3 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CUEDC1Q9NWM3 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.21□□□□□ -1.74
CUEDC1Q9NWM3 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.21□□□□□ -1.74
CUEDC1Q9NWM3 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CUEDC1Q9NWM3 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CUEDC1Q9NWM3 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CUEDC1Q9NWM3 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CUEDC1Q9NWM3 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CUEDC1Q9NWM3 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CUEDC1Q9NWM3 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
CUEDC1Q9NWM3 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CUEDC1Q9NWM3 AC011266.1-201ENST00000624119 3569 ntBASIC4.2□□□□□ -1.74
CUEDC1Q9NWM3 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CUEDC1Q9NWM3 Y_RNA.281-201ENST00000364774 94 ntBASIC4.2□□□□□ -1.74
CUEDC1Q9NWM3 MIR93-201ENST00000385024 80 ntBASIC4.2□□□□□ -1.74
CUEDC1Q9NWM3 RNA5SP496-201ENST00000391240 109 ntBASIC4.2□□□□□ -1.74
CUEDC1Q9NWM3 CBX3P9-201ENST00000402326 552 ntBASIC4.2□□□□□ -1.74
CUEDC1Q9NWM3 SNORA36B-201ENST00000410438 131 ntBASIC4.2□□□□□ -1.74
CUEDC1Q9NWM3 RN7SKP202-201ENST00000410439 330 ntBASIC4.2□□□□□ -1.74
CUEDC1Q9NWM3 RNU2-49P-201ENST00000410666 184 ntBASIC4.2□□□□□ -1.74
CUEDC1Q9NWM3 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.2□□□□□ -1.74
CUEDC1Q9NWM3 RPS29P17-201ENST00000430795 166 ntBASIC4.2□□□□□ -1.74
CUEDC1Q9NWM3 RPL23AP52-201ENST00000439311 478 ntBASIC4.2□□□□□ -1.74
CUEDC1Q9NWM3 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.2□□□□□ -1.74
CUEDC1Q9NWM3 RPS26P28-201ENST00000470806 348 ntBASIC4.2□□□□□ -1.74
CUEDC1Q9NWM3 AIG1P1-201ENST00000503376 148 ntBASIC4.2□□□□□ -1.74
CUEDC1Q9NWM3 AC018630.3-201ENST00000542637 96 ntBASIC4.2□□□□□ -1.74
CUEDC1Q9NWM3 AC025281.1-201ENST00000567026 265 ntBASIC4.2□□□□□ -1.74
CUEDC1Q9NWM3 AL031274.2-201ENST00000599419 203 ntBASIC4.2□□□□□ -1.74
CUEDC1Q9NWM3 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.2□□□□□ -1.74
CUEDC1Q9NWM3 AC113403.1-201ENST00000604910 193 ntBASIC4.2□□□□□ -1.74
CUEDC1Q9NWM3 AL137843.1-201ENST00000605078 385 ntBASIC4.2□□□□□ -1.74
CUEDC1Q9NWM3 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CUEDC1Q9NWM3 MIR492-201ENST00000638676 116 ntBASIC4.2□□□□□ -1.74
CUEDC1Q9NWM3 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.2□□□□□ -1.74
CUEDC1Q9NWM3 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CUEDC1Q9NWM3 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CUEDC1Q9NWM3 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CUEDC1Q9NWM3 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CUEDC1Q9NWM3 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.2□□□□□ -1.74
CUEDC1Q9NWM3 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 160.8 ms