Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
SIX2Q9NPC8 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
SIX2Q9NPC8 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
SIX2Q9NPC8 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
SIX2Q9NPC8 AC010329.5-201ENST00000623497 2174 ntBASIC2.22□□□□□ -2.05
SIX2Q9NPC8 RNU6-490P-201ENST00000362985 107 ntBASIC2.22□□□□□ -2.05
SIX2Q9NPC8 RNU6-486P-201ENST00000363116 107 ntBASIC2.22□□□□□ -2.05
SIX2Q9NPC8 RNU1-91P-201ENST00000364746 163 ntBASIC2.22□□□□□ -2.05
SIX2Q9NPC8 RNU6-1227P-201ENST00000383981 107 ntBASIC2.22□□□□□ -2.05
SIX2Q9NPC8 SNORA29-201ENST00000384183 140 ntBASIC2.22□□□□□ -2.05
SIX2Q9NPC8 RNU6-474P-201ENST00000384243 107 ntBASIC2.22□□□□□ -2.05
SIX2Q9NPC8 Y_RNA.463-201ENST00000384271 102 ntBASIC2.22□□□□□ -2.05
SIX2Q9NPC8 SNORA67.3-201ENST00000384366 140 ntBASIC2.22□□□□□ -2.05
SIX2Q9NPC8 SNORA64-201ENST00000384674 134 ntBASIC2.22□□□□□ -2.05
SIX2Q9NPC8 SNORA11.4-201ENST00000408823 129 ntBASIC2.22□□□□□ -2.05
SIX2Q9NPC8 RNU2-2P-201ENST00000410396 191 ntBASIC2.22□□□□□ -2.05
SIX2Q9NPC8 HMGB3P2-201ENST00000411913 584 ntBASIC2.22□□□□□ -2.05
SIX2Q9NPC8 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.22□□□□□ -2.05
SIX2Q9NPC8 EIF4EP4-201ENST00000424916 578 ntBASIC2.22□□□□□ -2.05
SIX2Q9NPC8 AC008267.5-201ENST00000424928 265 ntBASIC2.22□□□□□ -2.05
SIX2Q9NPC8 MTCYBP6-201ENST00000441810 138 ntBASIC2.22□□□□□ -2.05
SIX2Q9NPC8 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.22□□□□□ -2.05
SIX2Q9NPC8 AL121594.1-201ENST00000475906 575 ntBASIC2.22□□□□□ -2.05
SIX2Q9NPC8 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.22□□□□□ -2.05
SIX2Q9NPC8 AC068781.1-201ENST00000488231 618 ntBASIC2.22□□□□□ -2.05
SIX2Q9NPC8 AF186996.7-201ENST00000492781 209 ntBASIC2.22□□□□□ -2.05
SIX2Q9NPC8 AC090255.1-201ENST00000495779 349 ntBASIC2.22□□□□□ -2.05
SIX2Q9NPC8 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.22□□□□□ -2.05
SIX2Q9NPC8 RNU5F-2P-201ENST00000516066 82 ntBASIC2.22□□□□□ -2.05
SIX2Q9NPC8 RNU6-976P-201ENST00000516086 111 ntBASIC2.22□□□□□ -2.05
SIX2Q9NPC8 SNORA31.16-201ENST00000516773 139 ntBASIC2.22□□□□□ -2.05
SIX2Q9NPC8 RNU6-264P-201ENST00000517134 104 ntBASIC2.22□□□□□ -2.05
SIX2Q9NPC8 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.22□□□□□ -2.05
SIX2Q9NPC8 AC021231.3-201ENST00000558497 370 ntBASIC2.22□□□□□ -2.05
SIX2Q9NPC8 SUB1P3-201ENST00000564581 315 ntBASIC2.22□□□□□ -2.05
SIX2Q9NPC8 U2.15-201ENST00000611544 191 ntBASIC2.22□□□□□ -2.05
SIX2Q9NPC8 U2.16-201ENST00000613119 191 ntBASIC2.22□□□□□ -2.05
SIX2Q9NPC8 U2.12-201ENST00000613778 191 ntBASIC2.22□□□□□ -2.05
SIX2Q9NPC8 U2.20-201ENST00000613956 192 ntBASIC2.22□□□□□ -2.05
SIX2Q9NPC8 U2.9-201ENST00000615427 191 ntBASIC2.22□□□□□ -2.05
SIX2Q9NPC8 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.22□□□□□ -2.05
SIX2Q9NPC8 U2.11-201ENST00000616345 191 ntBASIC2.22□□□□□ -2.05
SIX2Q9NPC8 U2.2-201ENST00000616535 191 ntBASIC2.22□□□□□ -2.05
SIX2Q9NPC8 U2.3-201ENST00000617785 191 ntBASIC2.22□□□□□ -2.05
SIX2Q9NPC8 U2.19-201ENST00000618602 191 ntBASIC2.22□□□□□ -2.05
SIX2Q9NPC8 RNU2-1-201ENST00000618664 191 ntBASIC2.22□□□□□ -2.05
SIX2Q9NPC8 U2.6-201ENST00000619225 191 ntBASIC2.22□□□□□ -2.05
SIX2Q9NPC8 U2.5-201ENST00000619465 191 ntBASIC2.22□□□□□ -2.05
SIX2Q9NPC8 U2.10-201ENST00000620268 191 ntBASIC2.22□□□□□ -2.05
SIX2Q9NPC8 uc_338.22-201ENST00000622722 187 ntBASIC2.22□□□□□ -2.05
SIX2Q9NPC8 SCARNA15.3-201ENST00000626315 122 ntBASIC2.22□□□□□ -2.05
SIX2Q9NPC8 SCARNA4.1-201ENST00000628597 123 ntBASIC2.22□□□□□ -2.05
SIX2Q9NPC8 SCARNA4-201ENST00000629045 128 ntBASIC2.22□□□□□ -2.05
SIX2Q9NPC8 AC134503.1-201ENST00000633048 54 ntBASIC2.22□□□□□ -2.05
SIX2Q9NPC8 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
SIX2Q9NPC8 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
SIX2Q9NPC8 OR56A5-201ENST00000340110 738 ntBASIC2.21□□□□□ -2.06
SIX2Q9NPC8 Y_RNA.5-201ENST00000362334 102 ntBASIC2.21□□□□□ -2.06
SIX2Q9NPC8 RNU6-655P-201ENST00000362858 107 ntBASIC2.21□□□□□ -2.06
SIX2Q9NPC8 RNU5B-2P-201ENST00000363036 113 ntBASIC2.21□□□□□ -2.06
SIX2Q9NPC8 Y_RNA.112-201ENST00000363250 102 ntBASIC2.21□□□□□ -2.06
SIX2Q9NPC8 RNU4-9P-201ENST00000364951 139 ntBASIC2.21□□□□□ -2.06
SIX2Q9NPC8 Y_RNA.445-201ENST00000384168 102 ntBASIC2.21□□□□□ -2.06
SIX2Q9NPC8 SNORA36A-201ENST00000384221 132 ntBASIC2.21□□□□□ -2.06
SIX2Q9NPC8 SNORA3.2-201ENST00000408221 125 ntBASIC2.21□□□□□ -2.06
SIX2Q9NPC8 AL590135.1-201ENST00000422215 156 ntBASIC2.21□□□□□ -2.06
SIX2Q9NPC8 AC019205.3-201ENST00000424573 156 ntBASIC2.21□□□□□ -2.06
SIX2Q9NPC8 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.21□□□□□ -2.06
SIX2Q9NPC8 AL137792.2-201ENST00000443484 235 ntBASIC2.21□□□□□ -2.06
SIX2Q9NPC8 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.21□□□□□ -2.06
SIX2Q9NPC8 AC016700.2-201ENST00000446011 156 ntBASIC2.21□□□□□ -2.06
SIX2Q9NPC8 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.21□□□□□ -2.06
SIX2Q9NPC8 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.21□□□□□ -2.06
SIX2Q9NPC8 RN7SKP210-201ENST00000459176 261 ntBASIC2.21□□□□□ -2.06
SIX2Q9NPC8 RPL30P10-201ENST00000488148 337 ntBASIC2.21□□□□□ -2.06
SIX2Q9NPC8 AC015911.1-201ENST00000495111 156 ntBASIC2.21□□□□□ -2.06
SIX2Q9NPC8 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.21□□□□□ -2.06
SIX2Q9NPC8 RNU6-699P-201ENST00000517081 110 ntBASIC2.21□□□□□ -2.06
SIX2Q9NPC8 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.21□□□□□ -2.06
SIX2Q9NPC8 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.21□□□□□ -2.06
SIX2Q9NPC8 AL590705.4-201ENST00000532209 134 ntBASIC2.21□□□□□ -2.06
SIX2Q9NPC8 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.21□□□□□ -2.06
SIX2Q9NPC8 HSPE1P20-201ENST00000538133 289 ntBASIC2.21□□□□□ -2.06
SIX2Q9NPC8 AC020661.2-201ENST00000560114 134 ntBASIC2.21□□□□□ -2.06
SIX2Q9NPC8 SNORD53-201ENST00000579969 78 ntBASIC2.21□□□□□ -2.06
SIX2Q9NPC8 AL078605.1-201ENST00000603529 500 ntBASIC2.21□□□□□ -2.06
SIX2Q9NPC8 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.21□□□□□ -2.06
SIX2Q9NPC8 SNORD98-201ENST00000636377 67 ntBASIC2.21□□□□□ -2.06
SIX2Q9NPC8 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
SIX2Q9NPC8 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SIX2Q9NPC8 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SIX2Q9NPC8 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
SIX2Q9NPC8 Y_RNA.128-201ENST00000363391 112 ntBASIC2.2□□□□□ -2.06
SIX2Q9NPC8 RNU6-1210P-201ENST00000363775 107 ntBASIC2.2□□□□□ -2.06
SIX2Q9NPC8 RNA5SP37-201ENST00000365420 130 ntBASIC2.2□□□□□ -2.06
SIX2Q9NPC8 MIR548P-201ENST00000408336 84 ntBASIC2.2□□□□□ -2.06
SIX2Q9NPC8 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.2□□□□□ -2.06
SIX2Q9NPC8 Z98742.3-201ENST00000418637 326 ntBASIC2.2□□□□□ -2.06
SIX2Q9NPC8 AC027124.2-201ENST00000428249 105 ntBASIC2.2□□□□□ -2.06
SIX2Q9NPC8 AL356320.1-201ENST00000429616 163 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms