Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.7□□□□□ -1.5
RNF39Q9H2S5 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
RNF39Q9H2S5 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RNF39Q9H2S5 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RNF39Q9H2S5 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.69□□□□□ -1.5
RNF39Q9H2S5 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RNF39Q9H2S5 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RNF39Q9H2S5 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.69□□□□□ -1.5
RNF39Q9H2S5 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.69□□□□□ -1.5
RNF39Q9H2S5 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.69□□□□□ -1.5
RNF39Q9H2S5 RN7SKP185-201ENST00000362813 326 ntBASIC5.69□□□□□ -1.5
RNF39Q9H2S5 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RNF39Q9H2S5 MIR550A3-201ENST00000390735 95 ntBASIC5.69□□□□□ -1.5
RNF39Q9H2S5 HMGN2P8-201ENST00000391458 268 ntBASIC5.69□□□□□ -1.5
RNF39Q9H2S5 MIR1182-201ENST00000408363 97 ntBASIC5.69□□□□□ -1.5
RNF39Q9H2S5 AL450023.3-201ENST00000440592 271 ntBASIC5.69□□□□□ -1.5
RNF39Q9H2S5 RPL7AP28-201ENST00000464513 571 ntBASIC5.69□□□□□ -1.5
RNF39Q9H2S5 AC005908.1-201ENST00000468701 347 ntBASIC5.69□□□□□ -1.5
RNF39Q9H2S5 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.69□□□□□ -1.5
RNF39Q9H2S5 IGKV2OR2-8-201ENST00000558710 300 ntBASIC5.69□□□□□ -1.5
RNF39Q9H2S5 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.69□□□□□ -1.5
RNF39Q9H2S5 MIR4458-201ENST00000578872 75 ntBASIC5.69□□□□□ -1.5
RNF39Q9H2S5 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.69□□□□□ -1.5
RNF39Q9H2S5 uc_338.7-201ENST00000621834 124 ntBASIC5.69□□□□□ -1.5
RNF39Q9H2S5 AC000095.2-202ENST00000637415 154 ntBASIC5.69□□□□□ -1.5
RNF39Q9H2S5 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
RNF39Q9H2S5 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
RNF39Q9H2S5 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
RNF39Q9H2S5 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
RNF39Q9H2S5 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RNF39Q9H2S5 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.69□□□□□ -1.5
RNF39Q9H2S5 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.68□□□□□ -1.5
RNF39Q9H2S5 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
RNF39Q9H2S5 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
RNF39Q9H2S5 RNA5SP90-201ENST00000364801 99 ntBASIC5.68□□□□□ -1.5
RNF39Q9H2S5 RNU6-604P-201ENST00000390917 100 ntBASIC5.68□□□□□ -1.5
RNF39Q9H2S5 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RNF39Q9H2S5 RPL37P18-201ENST00000411602 243 ntBASIC5.68□□□□□ -1.5
RNF39Q9H2S5 CTSLP2-204ENST00000629029 392 ntBASIC5.68□□□□□ -1.5
RNF39Q9H2S5 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RNF39Q9H2S5 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RNF39Q9H2S5 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
RNF39Q9H2S5 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RNF39Q9H2S5 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.67□□□□□ -1.5
RNF39Q9H2S5 RNA5SP123-201ENST00000363244 119 ntBASIC5.67□□□□□ -1.5
RNF39Q9H2S5 RPS29P29-201ENST00000456396 171 ntBASIC5.67□□□□□ -1.5
RNF39Q9H2S5 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.67□□□□□ -1.5
RNF39Q9H2S5 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.67□□□□□ -1.5
RNF39Q9H2S5 RNU6-75P-201ENST00000515944 104 ntBASIC5.67□□□□□ -1.5
RNF39Q9H2S5 RNU6-991P-201ENST00000516168 107 ntBASIC5.67□□□□□ -1.5
RNF39Q9H2S5 RNA5SP228-201ENST00000516232 133 ntBASIC5.67□□□□□ -1.5
RNF39Q9H2S5 RNU4ATAC9P-201ENST00000517146 126 ntBASIC5.67□□□□□ -1.5
RNF39Q9H2S5 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.67□□□□□ -1.5
RNF39Q9H2S5 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC5.67□□□□□ -1.5
RNF39Q9H2S5 Mico1.1-201ENST00000611698 204 ntBASIC5.67□□□□□ -1.5
RNF39Q9H2S5 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.67□□□□□ -1.5
RNF39Q9H2S5 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
RNF39Q9H2S5 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RNF39Q9H2S5 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RNF39Q9H2S5 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
RNF39Q9H2S5 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RNF39Q9H2S5 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RNF39Q9H2S5 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.67□□□□□ -1.5
RNF39Q9H2S5 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RNF39Q9H2S5 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.67□□□□□ -1.5
RNF39Q9H2S5 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
RNF39Q9H2S5 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
RNF39Q9H2S5 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RNF39Q9H2S5 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RNF39Q9H2S5 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RNF39Q9H2S5 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC5.66□□□□□ -1.5
RNF39Q9H2S5 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RNF39Q9H2S5 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RNF39Q9H2S5 BCORP1-203ENST00000513194 5093 ntBASIC5.66□□□□□ -1.5
RNF39Q9H2S5 MIR585-201ENST00000384887 94 ntBASIC5.66□□□□□ -1.5
RNF39Q9H2S5 MIR660-201ENST00000385235 97 ntBASIC5.66□□□□□ -1.5
RNF39Q9H2S5 RNA5SP482-201ENST00000391269 118 ntBASIC5.66□□□□□ -1.5
RNF39Q9H2S5 RN7SKP17-201ENST00000411242 351 ntBASIC5.66□□□□□ -1.5
RNF39Q9H2S5 ATP6V0E1P3-201ENST00000420036 246 ntBASIC5.66□□□□□ -1.5
RNF39Q9H2S5 RPEP3-201ENST00000425462 676 ntBASIC5.66□□□□□ -1.5
RNF39Q9H2S5 RAC1P2-201ENST00000511164 579 ntBASIC5.66□□□□□ -1.5
RNF39Q9H2S5 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC5.66□□□□□ -1.5
RNF39Q9H2S5 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
RNF39Q9H2S5 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
RNF39Q9H2S5 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
RNF39Q9H2S5 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RNF39Q9H2S5 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RNF39Q9H2S5 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.65□□□□□ -1.5
RNF39Q9H2S5 AP003122.5-201ENST00000527668 3766 ntBASIC5.65□□□□□ -1.5
RNF39Q9H2S5 RNU6-1274P-201ENST00000384557 107 ntBASIC5.65□□□□□ -1.5
RNF39Q9H2S5 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
RNF39Q9H2S5 MIR2113-201ENST00000459007 91 ntBASIC5.65□□□□□ -1.5
RNF39Q9H2S5 snoU13.20-201ENST00000459180 104 ntBASIC5.65□□□□□ -1.5
RNF39Q9H2S5 RNU6-542P-201ENST00000516405 103 ntBASIC5.65□□□□□ -1.5
RNF39Q9H2S5 AL390726.5-202ENST00000564800 256 ntBASIC5.65□□□□□ -1.5
RNF39Q9H2S5 SNX18P1Y-201ENST00000616231 511 ntBASIC5.65□□□□□ -1.5
RNF39Q9H2S5 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
RNF39Q9H2S5 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
RNF39Q9H2S5 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.65□□□□□ -1.51
RNF39Q9H2S5 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms