Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 HSPE1P21-201ENST00000438283 308 ntBASIC1.84□□□□□ -2.11
CCSER1Q9C0I3 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.84□□□□□ -2.11
CCSER1Q9C0I3 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.84□□□□□ -2.11
CCSER1Q9C0I3 RNA5SP57-201ENST00000459463 123 ntBASIC1.84□□□□□ -2.11
CCSER1Q9C0I3 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.84□□□□□ -2.11
CCSER1Q9C0I3 RNU6-1069P-201ENST00000516612 133 ntBASIC1.84□□□□□ -2.11
CCSER1Q9C0I3 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.84□□□□□ -2.11
CCSER1Q9C0I3 MTND1P35-201ENST00000526739 508 ntBASIC1.84□□□□□ -2.11
CCSER1Q9C0I3 MIR3122-201ENST00000577243 73 ntBASIC1.84□□□□□ -2.11
CCSER1Q9C0I3 AC080078.2-201ENST00000603766 501 ntBASIC1.84□□□□□ -2.11
CCSER1Q9C0I3 AC084782.3-201ENST00000612282 578 ntBASIC1.84□□□□□ -2.11
CCSER1Q9C0I3 AC090517.2-201ENST00000614966 680 ntBASIC1.84□□□□□ -2.11
CCSER1Q9C0I3 AC073869.6-201ENST00000640656 341 ntBASIC1.84□□□□□ -2.11
CCSER1Q9C0I3 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
CCSER1Q9C0I3 RNU6-1164P-201ENST00000364428 107 ntBASIC1.83□□□□□ -2.12
CCSER1Q9C0I3 RNU6-336P-201ENST00000364891 107 ntBASIC1.83□□□□□ -2.12
CCSER1Q9C0I3 Y_RNA.505-201ENST00000384489 102 ntBASIC1.83□□□□□ -2.12
CCSER1Q9C0I3 Y_RNA.573-201ENST00000384763 105 ntBASIC1.83□□□□□ -2.12
CCSER1Q9C0I3 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
CCSER1Q9C0I3 EIF4E2P1-201ENST00000393781 255 ntBASIC1.83□□□□□ -2.12
CCSER1Q9C0I3 RPS29P13-201ENST00000402041 169 ntBASIC1.83□□□□□ -2.12
CCSER1Q9C0I3 MIR548F1-201ENST00000408667 84 ntBASIC1.83□□□□□ -2.12
CCSER1Q9C0I3 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.83□□□□□ -2.12
CCSER1Q9C0I3 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.83□□□□□ -2.12
CCSER1Q9C0I3 AC078809.1-201ENST00000427601 140 ntBASIC1.83□□□□□ -2.12
CCSER1Q9C0I3 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.83□□□□□ -2.12
CCSER1Q9C0I3 UBE2V1P8-201ENST00000437166 265 ntBASIC1.83□□□□□ -2.12
CCSER1Q9C0I3 AC243964.1-201ENST00000441814 261 ntBASIC1.83□□□□□ -2.12
CCSER1Q9C0I3 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.83□□□□□ -2.12
CCSER1Q9C0I3 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.83□□□□□ -2.12
CCSER1Q9C0I3 FTH1P25-201ENST00000447665 469 ntBASIC1.83□□□□□ -2.12
CCSER1Q9C0I3 AL031274.1-201ENST00000450334 232 ntBASIC1.83□□□□□ -2.12
CCSER1Q9C0I3 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.83□□□□□ -2.12
CCSER1Q9C0I3 AC112492.4-201ENST00000456549 352 ntBASIC1.83□□□□□ -2.12
CCSER1Q9C0I3 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.83□□□□□ -2.12
CCSER1Q9C0I3 RNU6-991P-201ENST00000516168 107 ntBASIC1.83□□□□□ -2.12
CCSER1Q9C0I3 SNORA25.15-201ENST00000516487 89 ntBASIC1.83□□□□□ -2.12
CCSER1Q9C0I3 SNORA44.1-201ENST00000517031 108 ntBASIC1.83□□□□□ -2.12
CCSER1Q9C0I3 AP005660.1-201ENST00000522972 293 ntBASIC1.83□□□□□ -2.12
CCSER1Q9C0I3 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.83□□□□□ -2.12
CCSER1Q9C0I3 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.83□□□□□ -2.12
CCSER1Q9C0I3 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.83□□□□□ -2.12
CCSER1Q9C0I3 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.83□□□□□ -2.12
CCSER1Q9C0I3 MIR502-201ENST00000606349 86 ntBASIC1.83□□□□□ -2.12
CCSER1Q9C0I3 AC068944.2-201ENST00000610373 403 ntBASIC1.83□□□□□ -2.12
CCSER1Q9C0I3 AL353997.5-201ENST00000618886 171 ntBASIC1.83□□□□□ -2.12
CCSER1Q9C0I3 AC130454.1-201ENST00000622948 401 ntBASIC1.83□□□□□ -2.12
CCSER1Q9C0I3 SNORD98-201ENST00000636377 67 ntBASIC1.83□□□□□ -2.12
CCSER1Q9C0I3 MTND4P5-201ENST00000435821 1374 ntBASIC1.83□□□□□ -2.12
CCSER1Q9C0I3 CBX3P1-201ENST00000325243 554 ntBASIC1.82□□□□□ -2.12
CCSER1Q9C0I3 RNU6-428P-201ENST00000362942 107 ntBASIC1.82□□□□□ -2.12
CCSER1Q9C0I3 RNU1-17P-201ENST00000363022 152 ntBASIC1.82□□□□□ -2.12
CCSER1Q9C0I3 Y_RNA.89-201ENST00000363031 102 ntBASIC1.82□□□□□ -2.12
CCSER1Q9C0I3 Y_RNA.256-201ENST00000364594 104 ntBASIC1.82□□□□□ -2.12
CCSER1Q9C0I3 RNA5SP190-201ENST00000365222 118 ntBASIC1.82□□□□□ -2.12
CCSER1Q9C0I3 RNU6-827P-201ENST00000365553 106 ntBASIC1.82□□□□□ -2.12
CCSER1Q9C0I3 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.82□□□□□ -2.12
CCSER1Q9C0I3 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.82□□□□□ -2.12
CCSER1Q9C0I3 FCF1P9-201ENST00000412546 282 ntBASIC1.82□□□□□ -2.12
CCSER1Q9C0I3 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.82□□□□□ -2.12
CCSER1Q9C0I3 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.82□□□□□ -2.12
CCSER1Q9C0I3 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.82□□□□□ -2.12
CCSER1Q9C0I3 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.82□□□□□ -2.12
CCSER1Q9C0I3 AC011352.1-201ENST00000512300 793 ntBASIC1.82□□□□□ -2.12
CCSER1Q9C0I3 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.82□□□□□ -2.12
CCSER1Q9C0I3 SNORA19.2-201ENST00000516013 114 ntBASIC1.82□□□□□ -2.12
CCSER1Q9C0I3 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.82□□□□□ -2.12
CCSER1Q9C0I3 AC087854.1-201ENST00000519706 414 ntBASIC1.82□□□□□ -2.12
CCSER1Q9C0I3 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.82□□□□□ -2.12
CCSER1Q9C0I3 HSBP1P1-201ENST00000555205 166 ntBASIC1.82□□□□□ -2.12
CCSER1Q9C0I3 MIR5692C1-201ENST00000585309 91 ntBASIC1.82□□□□□ -2.12
CCSER1Q9C0I3 AC122108.2-201ENST00000611946 526 ntBASIC1.82□□□□□ -2.12
CCSER1Q9C0I3 MIR1248-201ENST00000629190 106 ntBASIC1.82□□□□□ -2.12
CCSER1Q9C0I3 MIR3688-2-201ENST00000636963 87 ntBASIC1.82□□□□□ -2.12
CCSER1Q9C0I3 AC024614.3-201ENST00000637860 256 ntBASIC1.82□□□□□ -2.12
CCSER1Q9C0I3 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.82□□□□□ -2.12
CCSER1Q9C0I3 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CCSER1Q9C0I3 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CCSER1Q9C0I3 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CCSER1Q9C0I3 AC027514.1-201ENST00000588561 1603 ntBASIC1.81□□□□□ -2.12
CCSER1Q9C0I3 AC092268.1-201ENST00000342691 405 ntBASIC1.81□□□□□ -2.12
CCSER1Q9C0I3 RNU6-23P-201ENST00000363283 107 ntBASIC1.81□□□□□ -2.12
CCSER1Q9C0I3 SNORD115-47-201ENST00000391226 86 ntBASIC1.81□□□□□ -2.12
CCSER1Q9C0I3 RN7SKP61-201ENST00000410642 295 ntBASIC1.81□□□□□ -2.12
CCSER1Q9C0I3 RN7SKP101-201ENST00000411376 320 ntBASIC1.81□□□□□ -2.12
CCSER1Q9C0I3 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
CCSER1Q9C0I3 MTND1P4-201ENST00000435196 415 ntBASIC1.81□□□□□ -2.12
CCSER1Q9C0I3 AC244670.1-201ENST00000436879 112 ntBASIC1.81□□□□□ -2.12
CCSER1Q9C0I3 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.81□□□□□ -2.12
CCSER1Q9C0I3 MTCO2P3-201ENST00000442543 421 ntBASIC1.81□□□□□ -2.12
CCSER1Q9C0I3 AL035666.1-201ENST00000446195 348 ntBASIC1.81□□□□□ -2.12
CCSER1Q9C0I3 HMGN2P26-201ENST00000463169 339 ntBASIC1.81□□□□□ -2.12
CCSER1Q9C0I3 AC145146.1-201ENST00000496370 254 ntBASIC1.81□□□□□ -2.12
CCSER1Q9C0I3 AK3P2-201ENST00000507976 429 ntBASIC1.81□□□□□ -2.12
CCSER1Q9C0I3 AC005741.1-201ENST00000511094 432 ntBASIC1.81□□□□□ -2.12
CCSER1Q9C0I3 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.81□□□□□ -2.12
CCSER1Q9C0I3 RNU6-323P-201ENST00000521915 107 ntBASIC1.81□□□□□ -2.12
CCSER1Q9C0I3 AC103996.1-201ENST00000555468 102 ntBASIC1.81□□□□□ -2.12
CCSER1Q9C0I3 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.81□□□□□ -2.12
CCSER1Q9C0I3 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 167.5 ms