Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 AC073325.2-201ENST00000339545 159 ntBASIC3.92□□□□□ -1.78
CNTNAP4Q9C0A0 RNA5SP361-201ENST00000362686 118 ntBASIC3.92□□□□□ -1.78
CNTNAP4Q9C0A0 RNU6-1175P-201ENST00000365200 107 ntBASIC3.92□□□□□ -1.78
CNTNAP4Q9C0A0 RNU6-417P-201ENST00000384712 107 ntBASIC3.92□□□□□ -1.78
CNTNAP4Q9C0A0 SNORA40.19-201ENST00000390846 128 ntBASIC3.92□□□□□ -1.78
CNTNAP4Q9C0A0 NDUFS5P4-201ENST00000412983 318 ntBASIC3.92□□□□□ -1.78
CNTNAP4Q9C0A0 POLR2KP2-201ENST00000438155 177 ntBASIC3.92□□□□□ -1.78
CNTNAP4Q9C0A0 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.92□□□□□ -1.78
CNTNAP4Q9C0A0 HMGB3P8-201ENST00000449709 577 ntBASIC3.92□□□□□ -1.78
CNTNAP4Q9C0A0 HMGN2P7-201ENST00000456186 273 ntBASIC3.92□□□□□ -1.78
CNTNAP4Q9C0A0 AC140059.1-201ENST00000489238 361 ntBASIC3.92□□□□□ -1.78
CNTNAP4Q9C0A0 AC091959.1-201ENST00000495857 238 ntBASIC3.92□□□□□ -1.78
CNTNAP4Q9C0A0 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.92□□□□□ -1.78
CNTNAP4Q9C0A0 RNU6-237P-201ENST00000515985 71 ntBASIC3.92□□□□□ -1.78
CNTNAP4Q9C0A0 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.92□□□□□ -1.78
CNTNAP4Q9C0A0 MIR4319-201ENST00000577285 85 ntBASIC3.92□□□□□ -1.78
CNTNAP4Q9C0A0 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.92□□□□□ -1.78
CNTNAP4Q9C0A0 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CNTNAP4Q9C0A0 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.92□□□□□ -1.78
CNTNAP4Q9C0A0 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CNTNAP4Q9C0A0 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.91□□□□□ -1.78
CNTNAP4Q9C0A0 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CNTNAP4Q9C0A0 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.91□□□□□ -1.78
CNTNAP4Q9C0A0 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.91□□□□□ -1.78
CNTNAP4Q9C0A0 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CNTNAP4Q9C0A0 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CNTNAP4Q9C0A0 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.91□□□□□ -1.78
CNTNAP4Q9C0A0 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.91□□□□□ -1.78
CNTNAP4Q9C0A0 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CNTNAP4Q9C0A0 AC092268.1-201ENST00000342691 405 ntBASIC3.91□□□□□ -1.78
CNTNAP4Q9C0A0 AC062016.1-201ENST00000355719 319 ntBASIC3.91□□□□□ -1.78
CNTNAP4Q9C0A0 RNU6-898P-201ENST00000365627 104 ntBASIC3.91□□□□□ -1.78
CNTNAP4Q9C0A0 RNU6-1289P-201ENST00000384431 106 ntBASIC3.91□□□□□ -1.78
CNTNAP4Q9C0A0 SNORD116-20-201ENST00000384529 92 ntBASIC3.91□□□□□ -1.78
CNTNAP4Q9C0A0 RNA5SP293-201ENST00000410527 113 ntBASIC3.91□□□□□ -1.78
CNTNAP4Q9C0A0 RNU5E-9P-201ENST00000411164 104 ntBASIC3.91□□□□□ -1.78
CNTNAP4Q9C0A0 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.91□□□□□ -1.78
CNTNAP4Q9C0A0 RPS26P42-201ENST00000413485 326 ntBASIC3.91□□□□□ -1.78
CNTNAP4Q9C0A0 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.91□□□□□ -1.78
CNTNAP4Q9C0A0 AC010154.1-201ENST00000425857 269 ntBASIC3.91□□□□□ -1.78
CNTNAP4Q9C0A0 RPL21P66-201ENST00000426566 466 ntBASIC3.91□□□□□ -1.78
CNTNAP4Q9C0A0 AL512844.2-201ENST00000433990 593 ntBASIC3.91□□□□□ -1.78
CNTNAP4Q9C0A0 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.91□□□□□ -1.78
CNTNAP4Q9C0A0 RNU6-1219P-201ENST00000516143 112 ntBASIC3.91□□□□□ -1.78
CNTNAP4Q9C0A0 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CNTNAP4Q9C0A0 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.91□□□□□ -1.78
CNTNAP4Q9C0A0 AC021231.3-201ENST00000558497 370 ntBASIC3.91□□□□□ -1.78
CNTNAP4Q9C0A0 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.91□□□□□ -1.78
CNTNAP4Q9C0A0 MIR5695-201ENST00000579717 85 ntBASIC3.91□□□□□ -1.78
CNTNAP4Q9C0A0 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.91□□□□□ -1.78
CNTNAP4Q9C0A0 SNORA43.4-201ENST00000629559 138 ntBASIC3.91□□□□□ -1.78
CNTNAP4Q9C0A0 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CNTNAP4Q9C0A0 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CNTNAP4Q9C0A0 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
CNTNAP4Q9C0A0 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.9□□□□□ -1.78
CNTNAP4Q9C0A0 RBBP8P1-201ENST00000449447 1844 ntBASIC3.9□□□□□ -1.79
CNTNAP4Q9C0A0 Y_RNA.446-201ENST00000384178 104 ntBASIC3.9□□□□□ -1.79
CNTNAP4Q9C0A0 Y_RNA.497-201ENST00000384447 98 ntBASIC3.9□□□□□ -1.79
CNTNAP4Q9C0A0 Y_RNA.568-201ENST00000384742 113 ntBASIC3.9□□□□□ -1.79
CNTNAP4Q9C0A0 Y_RNA.586-201ENST00000391146 98 ntBASIC3.9□□□□□ -1.79
CNTNAP4Q9C0A0 MIR1261-201ENST00000408659 82 ntBASIC3.9□□□□□ -1.79
CNTNAP4Q9C0A0 Y_RNA.595-201ENST00000410403 105 ntBASIC3.9□□□□□ -1.79
CNTNAP4Q9C0A0 GPM6BP3-201ENST00000442797 145 ntBASIC3.9□□□□□ -1.79
CNTNAP4Q9C0A0 AP001025.1-201ENST00000486139 332 ntBASIC3.9□□□□□ -1.79
CNTNAP4Q9C0A0 AC083906.5-201ENST00000503722 328 ntBASIC3.9□□□□□ -1.79
CNTNAP4Q9C0A0 CKS1BP7-201ENST00000522230 235 ntBASIC3.9□□□□□ -1.79
CNTNAP4Q9C0A0 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.9□□□□□ -1.79
CNTNAP4Q9C0A0 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.9□□□□□ -1.79
CNTNAP4Q9C0A0 AC233702.2-202ENST00000562547 291 ntBASIC3.9□□□□□ -1.79
CNTNAP4Q9C0A0 AC005176.2-201ENST00000596933 147 ntBASIC3.9□□□□□ -1.79
CNTNAP4Q9C0A0 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.9□□□□□ -1.79
CNTNAP4Q9C0A0 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CNTNAP4Q9C0A0 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
CNTNAP4Q9C0A0 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
CNTNAP4Q9C0A0 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
CNTNAP4Q9C0A0 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CNTNAP4Q9C0A0 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CNTNAP4Q9C0A0 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CNTNAP4Q9C0A0 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CNTNAP4Q9C0A0 Y_RNA.261-201ENST00000364631 102 ntBASIC3.89□□□□□ -1.79
CNTNAP4Q9C0A0 RNU1-100P-201ENST00000365255 165 ntBASIC3.89□□□□□ -1.79
CNTNAP4Q9C0A0 Y_RNA.441-201ENST00000384123 112 ntBASIC3.89□□□□□ -1.79
CNTNAP4Q9C0A0 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.89□□□□□ -1.79
CNTNAP4Q9C0A0 AC114982.1-201ENST00000469402 321 ntBASIC3.89□□□□□ -1.79
CNTNAP4Q9C0A0 RPS4XP22-201ENST00000480755 780 ntBASIC3.89□□□□□ -1.79
CNTNAP4Q9C0A0 RPS27P26-201ENST00000494583 239 ntBASIC3.89□□□□□ -1.79
CNTNAP4Q9C0A0 AC091874.1-201ENST00000511402 339 ntBASIC3.89□□□□□ -1.79
CNTNAP4Q9C0A0 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.89□□□□□ -1.79
CNTNAP4Q9C0A0 RNY3P16-201ENST00000516338 101 ntBASIC3.89□□□□□ -1.79
CNTNAP4Q9C0A0 HSPE1P4-201ENST00000550617 308 ntBASIC3.89□□□□□ -1.79
CNTNAP4Q9C0A0 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.89□□□□□ -1.79
CNTNAP4Q9C0A0 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.89□□□□□ -1.79
CNTNAP4Q9C0A0 AC022441.3-201ENST00000605737 136 ntBASIC3.89□□□□□ -1.79
CNTNAP4Q9C0A0 IGHVIII-44-202ENST00000636235 289 ntBASIC3.89□□□□□ -1.79
CNTNAP4Q9C0A0 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CNTNAP4Q9C0A0 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CNTNAP4Q9C0A0 AL136360.1-201ENST00000503377 1900 ntBASIC3.88□□□□□ -1.79
CNTNAP4Q9C0A0 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
CNTNAP4Q9C0A0 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.88□□□□□ -1.79
CNTNAP4Q9C0A0 SNORD56.1-201ENST00000362913 68 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms