Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC1.21□□□□□ -2.21
KRTAP4-4Q9BYR3 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 CDH18-201ENST00000274170 2809 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 MFSD8-233ENST00000641482 4860 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 AC015813.6-201ENST00000624409 5808 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 RN7SKP185-201ENST00000362813 326 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 RNA5SP188-201ENST00000362916 129 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 RNU6-1260P-201ENST00000362944 107 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 RNA5SP382-201ENST00000363355 112 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 SNORD35A-201ENST00000363389 86 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 RN7SKP160-201ENST00000363804 340 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 SNORA70.2-201ENST00000364506 135 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 Y_RNA.267-201ENST00000364679 109 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 RNA5SP172-201ENST00000365061 118 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 SNORA70G-201ENST00000383923 142 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 SNORA68-201ENST00000384437 133 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 RNU6-530P-201ENST00000391180 107 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 RNU1-56P-201ENST00000391303 164 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 RN7SKP17-201ENST00000411242 351 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 COX6CP13-201ENST00000428703 226 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 KRTAP3-4P-201ENST00000430780 280 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 HMGN1P33-201ENST00000432945 451 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 STAG3L5P-204ENST00000443759 179 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 snoU13.14-201ENST00000459372 104 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 RN7SL492P-201ENST00000460700 295 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 RN7SL39P-201ENST00000462264 297 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 AC021074.2-201ENST00000468434 172 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 RN7SL177P-201ENST00000476596 299 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 RN7SL170P-201ENST00000487098 295 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 RN7SL244P-201ENST00000493405 297 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 RN7SL187P-201ENST00000495587 303 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 RN7SL775P-201ENST00000498361 336 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 RN7SL284P-201ENST00000498823 275 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 AC146944.3-201ENST00000509969 371 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 RNA5SP287-201ENST00000516358 103 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 SCARNA15.2-201ENST00000516409 127 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 SNORA44.1-201ENST00000517031 108 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 IGLC4-201ENST00000517690 248 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 RPL10P18-201ENST00000519384 309 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 SAA3P-201ENST00000533267 365 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 CYCSP30-201ENST00000546447 172 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 AL031846.1-201ENST00000560933 314 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 MIR3154-201ENST00000577829 84 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 MIR4502-201ENST00000580432 81 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 RN7SL475P-201ENST00000583379 298 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 AL121932.1-201ENST00000605542 214 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 RPSAP75-201ENST00000605848 301 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 AL513218.1-201ENST00000606527 391 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 AC000068.2-201ENST00000608816 460 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 uc_338.25-201ENST00000613756 156 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 pRNA.12-201ENST00000614353 90 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 pRNA.3-201ENST00000615048 90 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 AC090617.8-201ENST00000623339 167 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 AC068213.1-201ENST00000625124 226 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 SNORA16A-202ENST00000628458 135 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 MIR6079-201ENST00000635807 62 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 U6.109-201ENST00000636749 87 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 USP8-204ENST00000425032 3559 ntTSL 2 BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 TDP1-201ENST00000335725 3702 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 AL731556.1-201ENST00000394628 3711 ntBASIC1.21□□□□□ -2.22
KRTAP4-4Q9BYR3 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms