Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 MTCYBP8-201ENST00000422855 651 ntBASIC1.56□□□□□ -2.16
RPAP1Q9BWH6 MTCO3P46-201ENST00000425787 232 ntBASIC1.56□□□□□ -2.16
RPAP1Q9BWH6 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.56□□□□□ -2.16
RPAP1Q9BWH6 RPL23AP95-201ENST00000426806 265 ntBASIC1.56□□□□□ -2.16
RPAP1Q9BWH6 CETN4P-201ENST00000432407 469 ntBASIC1.56□□□□□ -2.16
RPAP1Q9BWH6 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.56□□□□□ -2.16
RPAP1Q9BWH6 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.56□□□□□ -2.16
RPAP1Q9BWH6 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.56□□□□□ -2.16
RPAP1Q9BWH6 AC090821.2-201ENST00000523552 176 ntBASIC1.56□□□□□ -2.16
RPAP1Q9BWH6 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.56□□□□□ -2.16
RPAP1Q9BWH6 AC007834.2-201ENST00000536310 343 ntBASIC1.56□□□□□ -2.16
RPAP1Q9BWH6 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.56□□□□□ -2.16
RPAP1Q9BWH6 AC078795.3-201ENST00000602913 472 ntBASIC1.56□□□□□ -2.16
RPAP1Q9BWH6 AC012507.3-201ENST00000603556 477 ntBASIC1.56□□□□□ -2.16
RPAP1Q9BWH6 RNU6-85P-201ENST00000605989 107 ntBASIC1.56□□□□□ -2.16
RPAP1Q9BWH6 U2.17-201ENST00000611454 95 ntBASIC1.56□□□□□ -2.16
RPAP1Q9BWH6 AL133216.2-202ENST00000634512 349 ntBASIC1.56□□□□□ -2.16
RPAP1Q9BWH6 AC121333.1-201ENST00000567488 2709 ntBASIC1.55□□□□□ -2.16
RPAP1Q9BWH6 LINC02555-201ENST00000563933 1951 ntBASIC1.55□□□□□ -2.16
RPAP1Q9BWH6 AC092268.1-201ENST00000342691 405 ntBASIC1.55□□□□□ -2.16
RPAP1Q9BWH6 MIR150-201ENST00000385048 84 ntBASIC1.55□□□□□ -2.16
RPAP1Q9BWH6 RNA5SP100-201ENST00000410903 110 ntBASIC1.55□□□□□ -2.16
RPAP1Q9BWH6 RNA5SP59-201ENST00000410922 110 ntBASIC1.55□□□□□ -2.16
RPAP1Q9BWH6 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.55□□□□□ -2.16
RPAP1Q9BWH6 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.55□□□□□ -2.16
RPAP1Q9BWH6 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.55□□□□□ -2.16
RPAP1Q9BWH6 RNU7-63P-201ENST00000459054 62 ntBASIC1.55□□□□□ -2.16
RPAP1Q9BWH6 AC016632.1-201ENST00000503994 196 ntBASIC1.55□□□□□ -2.16
RPAP1Q9BWH6 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.55□□□□□ -2.16
RPAP1Q9BWH6 AC005741.1-201ENST00000511094 432 ntBASIC1.55□□□□□ -2.16
RPAP1Q9BWH6 AC010493.1-201ENST00000513479 292 ntBASIC1.55□□□□□ -2.16
RPAP1Q9BWH6 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.55□□□□□ -2.16
RPAP1Q9BWH6 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.55□□□□□ -2.16
RPAP1Q9BWH6 MIR5583-1-201ENST00000580941 59 ntBASIC1.55□□□□□ -2.16
RPAP1Q9BWH6 AC008088.1-201ENST00000580993 280 ntBASIC1.55□□□□□ -2.16
RPAP1Q9BWH6 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.55□□□□□ -2.16
RPAP1Q9BWH6 PCGEM1.1-201ENST00000613431 131 ntBASIC1.55□□□□□ -2.16
RPAP1Q9BWH6 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.55□□□□□ -2.16
RPAP1Q9BWH6 AC078883.4-201ENST00000623218 367 ntBASIC1.55□□□□□ -2.16
RPAP1Q9BWH6 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
RPAP1Q9BWH6 AL161722.3-201ENST00000605789 2983 ntBASIC1.54□□□□□ -2.16
RPAP1Q9BWH6 AC245060.5-201ENST00000610778 3293 ntBASIC1.54□□□□□ -2.16
RPAP1Q9BWH6 MIR126-201ENST00000362291 85 ntBASIC1.54□□□□□ -2.16
RPAP1Q9BWH6 RNU6-996P-201ENST00000365438 107 ntBASIC1.54□□□□□ -2.16
RPAP1Q9BWH6 RNU5A-6P-201ENST00000384136 116 ntBASIC1.54□□□□□ -2.16
RPAP1Q9BWH6 SNORA75-201ENST00000384158 137 ntBASIC1.54□□□□□ -2.16
RPAP1Q9BWH6 SNORD116-8-201ENST00000384365 95 ntBASIC1.54□□□□□ -2.16
RPAP1Q9BWH6 SNORA26.3-201ENST00000391119 136 ntBASIC1.54□□□□□ -2.16
RPAP1Q9BWH6 AC123900.1-201ENST00000420390 96 ntBASIC1.54□□□□□ -2.16
RPAP1Q9BWH6 RNU7-180P-201ENST00000459240 63 ntBASIC1.54□□□□□ -2.16
RPAP1Q9BWH6 AC091874.1-201ENST00000511402 339 ntBASIC1.54□□□□□ -2.16
RPAP1Q9BWH6 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.54□□□□□ -2.16
RPAP1Q9BWH6 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.54□□□□□ -2.16
RPAP1Q9BWH6 OSBPL9P5-201ENST00000542581 171 ntBASIC1.54□□□□□ -2.16
RPAP1Q9BWH6 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.54□□□□□ -2.16
RPAP1Q9BWH6 Z99497.2-201ENST00000603634 310 ntBASIC1.54□□□□□ -2.16
RPAP1Q9BWH6 AP001836.1-201ENST00000604675 523 ntBASIC1.54□□□□□ -2.16
RPAP1Q9BWH6 AC008147.4-201ENST00000617570 1204 ntBASIC1.54□□□□□ -2.16
RPAP1Q9BWH6 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.54□□□□□ -2.16
RPAP1Q9BWH6 AL450472.1-202ENST00000637286 180 ntBASIC1.54□□□□□ -2.16
RPAP1Q9BWH6 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.54□□□□□ -2.16
RPAP1Q9BWH6 Y_RNA.354-201ENST00000365448 111 ntBASIC1.53□□□□□ -2.16
RPAP1Q9BWH6 RNU6-1103P-201ENST00000384150 107 ntBASIC1.53□□□□□ -2.16
RPAP1Q9BWH6 RNU6-378P-201ENST00000384324 107 ntBASIC1.53□□□□□ -2.16
RPAP1Q9BWH6 RNU2-41P-201ENST00000410991 178 ntBASIC1.53□□□□□ -2.16
RPAP1Q9BWH6 MTCO3P41-201ENST00000414801 328 ntBASIC1.53□□□□□ -2.16
RPAP1Q9BWH6 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.53□□□□□ -2.16
RPAP1Q9BWH6 RNU1-131P-201ENST00000458943 161 ntBASIC1.53□□□□□ -2.16
RPAP1Q9BWH6 AC008628.2-201ENST00000502605 298 ntBASIC1.53□□□□□ -2.16
RPAP1Q9BWH6 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.53□□□□□ -2.16
RPAP1Q9BWH6 AL354950.2-201ENST00000617939 290 ntBASIC1.53□□□□□ -2.16
RPAP1Q9BWH6 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
RPAP1Q9BWH6 SNORD114-26-201ENST00000363543 72 ntBASIC1.52□□□□□ -2.17
RPAP1Q9BWH6 U3.9-201ENST00000363823 204 ntBASIC1.52□□□□□ -2.17
RPAP1Q9BWH6 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.52□□□□□ -2.17
RPAP1Q9BWH6 Y_RNA.504-201ENST00000384481 104 ntBASIC1.52□□□□□ -2.17
RPAP1Q9BWH6 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.52□□□□□ -2.17
RPAP1Q9BWH6 SNRPEP8-201ENST00000442866 260 ntBASIC1.52□□□□□ -2.17
RPAP1Q9BWH6 AC073415.1-201ENST00000449240 153 ntBASIC1.52□□□□□ -2.17
RPAP1Q9BWH6 RNU6-956P-201ENST00000458868 103 ntBASIC1.52□□□□□ -2.17
RPAP1Q9BWH6 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.52□□□□□ -2.17
RPAP1Q9BWH6 AL163973.1-201ENST00000484753 577 ntBASIC1.52□□□□□ -2.17
RPAP1Q9BWH6 AC021146.2-201ENST00000504736 556 ntBASIC1.52□□□□□ -2.17
RPAP1Q9BWH6 AC098862.1-201ENST00000504991 413 ntBASIC1.52□□□□□ -2.17
RPAP1Q9BWH6 AC008834.1-201ENST00000511612 175 ntBASIC1.52□□□□□ -2.17
RPAP1Q9BWH6 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.52□□□□□ -2.17
RPAP1Q9BWH6 MTND4P7-201ENST00000523876 130 ntBASIC1.52□□□□□ -2.17
RPAP1Q9BWH6 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.52□□□□□ -2.17
RPAP1Q9BWH6 AC016957.1-201ENST00000534895 309 ntBASIC1.52□□□□□ -2.17
RPAP1Q9BWH6 MTND3P12-201ENST00000559068 328 ntBASIC1.52□□□□□ -2.17
RPAP1Q9BWH6 AC005786.1-201ENST00000588553 154 ntBASIC1.52□□□□□ -2.17
RPAP1Q9BWH6 AC119751.7-201ENST00000600494 245 ntBASIC1.52□□□□□ -2.17
RPAP1Q9BWH6 AL391646.1-201ENST00000603860 190 ntBASIC1.52□□□□□ -2.17
RPAP1Q9BWH6 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.52□□□□□ -2.17
RPAP1Q9BWH6 Z69908.1-201ENST00000622603 247 ntBASIC1.52□□□□□ -2.17
RPAP1Q9BWH6 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.51□□□□□ -2.17
RPAP1Q9BWH6 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
RPAP1Q9BWH6 RNU6-438P-201ENST00000365561 103 ntBASIC1.51□□□□□ -2.17
RPAP1Q9BWH6 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
RPAP1Q9BWH6 RNU6-955P-201ENST00000410497 104 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms