Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 RN7SKP209-201ENST00000516888 304 ntBASIC3.99□□□□□ -1.77
TRAIPQ9BWF2 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.99□□□□□ -1.77
TRAIPQ9BWF2 AC090616.3-201ENST00000582184 217 ntBASIC3.99□□□□□ -1.77
TRAIPQ9BWF2 AC073657.2-201ENST00000605661 303 ntBASIC3.99□□□□□ -1.77
TRAIPQ9BWF2 AL356274.2-201ENST00000624379 3752 ntBASIC3.99□□□□□ -1.77
TRAIPQ9BWF2 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
TRAIPQ9BWF2 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
TRAIPQ9BWF2 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
TRAIPQ9BWF2 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
TRAIPQ9BWF2 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
TRAIPQ9BWF2 U3.8-201ENST00000363675 217 ntBASIC3.98□□□□□ -1.77
TRAIPQ9BWF2 RNU6-961P-201ENST00000363893 105 ntBASIC3.98□□□□□ -1.77
TRAIPQ9BWF2 Y_RNA.193-201ENST00000363979 102 ntBASIC3.98□□□□□ -1.77
TRAIPQ9BWF2 Y_RNA.222-201ENST00000364264 102 ntBASIC3.98□□□□□ -1.77
TRAIPQ9BWF2 SNORD87-201ENST00000364849 89 ntBASIC3.98□□□□□ -1.77
TRAIPQ9BWF2 Y_RNA.288-201ENST00000364854 92 ntBASIC3.98□□□□□ -1.77
TRAIPQ9BWF2 RNU6-574P-201ENST00000384265 107 ntBASIC3.98□□□□□ -1.77
TRAIPQ9BWF2 MIR586-201ENST00000385035 97 ntBASIC3.98□□□□□ -1.77
TRAIPQ9BWF2 SNORD115-46-201ENST00000390982 71 ntBASIC3.98□□□□□ -1.77
TRAIPQ9BWF2 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
TRAIPQ9BWF2 AC004866.1-201ENST00000411748 78 ntBASIC3.98□□□□□ -1.77
TRAIPQ9BWF2 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.98□□□□□ -1.77
TRAIPQ9BWF2 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.98□□□□□ -1.77
TRAIPQ9BWF2 RPL26P26-201ENST00000480251 434 ntBASIC3.98□□□□□ -1.77
TRAIPQ9BWF2 AC025465.3-201ENST00000510570 311 ntBASIC3.98□□□□□ -1.77
TRAIPQ9BWF2 RN7SKP83-201ENST00000516512 178 ntBASIC3.98□□□□□ -1.77
TRAIPQ9BWF2 RN7SKP40-201ENST00000517211 242 ntBASIC3.98□□□□□ -1.77
TRAIPQ9BWF2 AK6P2-201ENST00000549020 471 ntBASIC3.98□□□□□ -1.77
TRAIPQ9BWF2 SNORD113-5-201ENST00000607261 78 ntBASIC3.98□□□□□ -1.77
TRAIPQ9BWF2 MIR7851-201ENST00000610611 160 ntBASIC3.98□□□□□ -1.77
TRAIPQ9BWF2 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.98□□□□□ -1.77
TRAIPQ9BWF2 MIR3674-201ENST00000636576 68 ntBASIC3.98□□□□□ -1.77
TRAIPQ9BWF2 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
TRAIPQ9BWF2 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.98□□□□□ -1.77
TRAIPQ9BWF2 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.98□□□□□ -1.77
TRAIPQ9BWF2 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
TRAIPQ9BWF2 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.97□□□□□ -1.77
TRAIPQ9BWF2 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TRAIPQ9BWF2 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TRAIPQ9BWF2 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TRAIPQ9BWF2 SNORD113-8-201ENST00000363497 74 ntBASIC3.97□□□□□ -1.77
TRAIPQ9BWF2 RNA5SP387-201ENST00000364226 106 ntBASIC3.97□□□□□ -1.77
TRAIPQ9BWF2 RNU6-806P-201ENST00000365147 105 ntBASIC3.97□□□□□ -1.77
TRAIPQ9BWF2 SNORA11.1-201ENST00000408133 129 ntBASIC3.97□□□□□ -1.77
TRAIPQ9BWF2 MIR1283-1-201ENST00000408494 87 ntBASIC3.97□□□□□ -1.77
TRAIPQ9BWF2 Y_RNA.602-201ENST00000410535 92 ntBASIC3.97□□□□□ -1.77
TRAIPQ9BWF2 RNU2-25P-201ENST00000411041 191 ntBASIC3.97□□□□□ -1.77
TRAIPQ9BWF2 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.97□□□□□ -1.77
TRAIPQ9BWF2 AC104389.3-201ENST00000445629 235 ntBASIC3.97□□□□□ -1.77
TRAIPQ9BWF2 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.97□□□□□ -1.77
TRAIPQ9BWF2 RNU6-570P-201ENST00000517051 105 ntBASIC3.97□□□□□ -1.77
TRAIPQ9BWF2 RNA5SP490-201ENST00000517141 136 ntBASIC3.97□□□□□ -1.77
TRAIPQ9BWF2 AC006380.1-201ENST00000603598 186 ntBASIC3.97□□□□□ -1.77
TRAIPQ9BWF2 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.97□□□□□ -1.77
TRAIPQ9BWF2 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TRAIPQ9BWF2 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TRAIPQ9BWF2 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TRAIPQ9BWF2 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TRAIPQ9BWF2 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.97□□□□□ -1.77
TRAIPQ9BWF2 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
TRAIPQ9BWF2 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
TRAIPQ9BWF2 RNU6-545P-201ENST00000362681 104 ntBASIC3.96□□□□□ -1.78
TRAIPQ9BWF2 RNU1-23P-201ENST00000363361 144 ntBASIC3.96□□□□□ -1.78
TRAIPQ9BWF2 SNORD31B-201ENST00000364977 69 ntBASIC3.96□□□□□ -1.78
TRAIPQ9BWF2 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TRAIPQ9BWF2 ELOCP21-201ENST00000412558 336 ntBASIC3.96□□□□□ -1.78
TRAIPQ9BWF2 TOMM22P2-201ENST00000430735 237 ntBASIC3.96□□□□□ -1.78
TRAIPQ9BWF2 TRBVB-201ENST00000477100 408 ntBASIC3.96□□□□□ -1.78
TRAIPQ9BWF2 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.96□□□□□ -1.78
TRAIPQ9BWF2 AC136932.1-201ENST00000574771 208 ntBASIC3.96□□□□□ -1.78
TRAIPQ9BWF2 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.96□□□□□ -1.78
TRAIPQ9BWF2 AC006001.4-201ENST00000622243 395 ntBASIC3.96□□□□□ -1.78
TRAIPQ9BWF2 AC008873.1-201ENST00000625051 138 ntBASIC3.96□□□□□ -1.78
TRAIPQ9BWF2 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.96□□□□□ -1.78
TRAIPQ9BWF2 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
TRAIPQ9BWF2 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.96□□□□□ -1.78
TRAIPQ9BWF2 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
TRAIPQ9BWF2 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TRAIPQ9BWF2 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TRAIPQ9BWF2 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
TRAIPQ9BWF2 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.95□□□□□ -1.78
TRAIPQ9BWF2 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TRAIPQ9BWF2 SNORA38-201ENST00000363946 132 ntBASIC3.95□□□□□ -1.78
TRAIPQ9BWF2 SNORA51.4-201ENST00000364993 124 ntBASIC3.95□□□□□ -1.78
TRAIPQ9BWF2 RNU6-1175P-201ENST00000365200 107 ntBASIC3.95□□□□□ -1.78
TRAIPQ9BWF2 Y_RNA.333-201ENST00000365274 102 ntBASIC3.95□□□□□ -1.78
TRAIPQ9BWF2 Y_RNA.618-201ENST00000410949 107 ntBASIC3.95□□□□□ -1.78
TRAIPQ9BWF2 AC009238.1-201ENST00000442165 424 ntBASIC3.95□□□□□ -1.78
TRAIPQ9BWF2 AC009237.6-201ENST00000446969 424 ntBASIC3.95□□□□□ -1.78
TRAIPQ9BWF2 NDUFB4P10-201ENST00000452541 359 ntBASIC3.95□□□□□ -1.78
TRAIPQ9BWF2 AC026784.1-201ENST00000507986 352 ntBASIC3.95□□□□□ -1.78
TRAIPQ9BWF2 RNU6-56P-201ENST00000516986 93 ntBASIC3.95□□□□□ -1.78
TRAIPQ9BWF2 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.95□□□□□ -1.78
TRAIPQ9BWF2 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.95□□□□□ -1.78
TRAIPQ9BWF2 AC037487.3-201ENST00000606668 112 ntBASIC3.95□□□□□ -1.78
TRAIPQ9BWF2 AC096577.2-201ENST00000611455 153 ntBASIC3.95□□□□□ -1.78
TRAIPQ9BWF2 U4atac.1-201ENST00000618345 95 ntBASIC3.95□□□□□ -1.78
TRAIPQ9BWF2 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRAIPQ9BWF2 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TRAIPQ9BWF2 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms