Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 RNU6-851P-201ENST00000384565 107 ntBASIC2.74□□□□□ -1.97
CTHRC1Q96CG8 SNORA44-201ENST00000384584 132 ntBASIC2.74□□□□□ -1.97
CTHRC1Q96CG8 RNU6-713P-201ENST00000384761 107 ntBASIC2.74□□□□□ -1.97
CTHRC1Q96CG8 MIR568-201ENST00000385036 95 ntBASIC2.74□□□□□ -1.97
CTHRC1Q96CG8 SNORD78.2-201ENST00000391076 69 ntBASIC2.74□□□□□ -1.97
CTHRC1Q96CG8 SNORA26.7-201ENST00000391288 122 ntBASIC2.74□□□□□ -1.97
CTHRC1Q96CG8 SDAD1P3-201ENST00000427380 333 ntBASIC2.74□□□□□ -1.97
CTHRC1Q96CG8 AC104332.2-201ENST00000429959 156 ntBASIC2.74□□□□□ -1.97
CTHRC1Q96CG8 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.74□□□□□ -1.97
CTHRC1Q96CG8 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.74□□□□□ -1.97
CTHRC1Q96CG8 RPL21P2-201ENST00000440049 481 ntBASIC2.74□□□□□ -1.97
CTHRC1Q96CG8 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.74□□□□□ -1.97
CTHRC1Q96CG8 AC096638.1-201ENST00000444678 216 ntBASIC2.74□□□□□ -1.97
CTHRC1Q96CG8 FCF1P4-201ENST00000448326 183 ntBASIC2.74□□□□□ -1.97
CTHRC1Q96CG8 AC007215.1-201ENST00000464893 276 ntBASIC2.74□□□□□ -1.97
CTHRC1Q96CG8 SCARNA17.1-201ENST00000516211 143 ntBASIC2.74□□□□□ -1.97
CTHRC1Q96CG8 RNY3P15-201ENST00000516297 97 ntBASIC2.74□□□□□ -1.97
CTHRC1Q96CG8 SCARNA17.2-201ENST00000516334 143 ntBASIC2.74□□□□□ -1.97
CTHRC1Q96CG8 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.74□□□□□ -1.97
CTHRC1Q96CG8 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.74□□□□□ -1.97
CTHRC1Q96CG8 AC107016.2-201ENST00000547968 190 ntBASIC2.74□□□□□ -1.97
CTHRC1Q96CG8 Y_RNA.772-201ENST00000606692 102 ntBASIC2.74□□□□□ -1.97
CTHRC1Q96CG8 SCARNA17.4-201ENST00000614296 143 ntBASIC2.74□□□□□ -1.97
CTHRC1Q96CG8 U4.1-201ENST00000620349 87 ntBASIC2.74□□□□□ -1.97
CTHRC1Q96CG8 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.74□□□□□ -1.97
CTHRC1Q96CG8 AC096644.4-201ENST00000563417 2912 ntBASIC2.74□□□□□ -1.97
CTHRC1Q96CG8 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.74□□□□□ -1.97
CTHRC1Q96CG8 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.74□□□□□ -1.97
CTHRC1Q96CG8 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
CTHRC1Q96CG8 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CTHRC1Q96CG8 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CTHRC1Q96CG8 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
CTHRC1Q96CG8 SNORA9.2-201ENST00000365361 133 ntBASIC2.73□□□□□ -1.97
CTHRC1Q96CG8 Y_RNA.439-201ENST00000384119 94 ntBASIC2.73□□□□□ -1.97
CTHRC1Q96CG8 RNU6-281P-201ENST00000384212 103 ntBASIC2.73□□□□□ -1.97
CTHRC1Q96CG8 Y_RNA.458-201ENST00000384240 102 ntBASIC2.73□□□□□ -1.97
CTHRC1Q96CG8 Y_RNA.556-201ENST00000384677 113 ntBASIC2.73□□□□□ -1.97
CTHRC1Q96CG8 MIR10B-201ENST00000385011 110 ntBASIC2.73□□□□□ -1.97
CTHRC1Q96CG8 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.73□□□□□ -1.97
CTHRC1Q96CG8 RN7SKP58-201ENST00000411010 305 ntBASIC2.73□□□□□ -1.97
CTHRC1Q96CG8 EIF4EP4-201ENST00000424916 578 ntBASIC2.73□□□□□ -1.97
CTHRC1Q96CG8 IPO7P1-201ENST00000442031 636 ntBASIC2.73□□□□□ -1.97
CTHRC1Q96CG8 DYNLT3P2-201ENST00000442517 295 ntBASIC2.73□□□□□ -1.97
CTHRC1Q96CG8 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.73□□□□□ -1.97
CTHRC1Q96CG8 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.73□□□□□ -1.97
CTHRC1Q96CG8 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.73□□□□□ -1.97
CTHRC1Q96CG8 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.73□□□□□ -1.97
CTHRC1Q96CG8 AL161670.1-201ENST00000554348 137 ntBASIC2.73□□□□□ -1.97
CTHRC1Q96CG8 AC090517.1-201ENST00000569307 266 ntBASIC2.73□□□□□ -1.97
CTHRC1Q96CG8 MIR4503-201ENST00000582187 83 ntBASIC2.73□□□□□ -1.97
CTHRC1Q96CG8 MIR3149-201ENST00000584629 83 ntBASIC2.73□□□□□ -1.97
CTHRC1Q96CG8 SNRPGP20-201ENST00000604477 205 ntBASIC2.73□□□□□ -1.97
CTHRC1Q96CG8 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.73□□□□□ -1.97
CTHRC1Q96CG8 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.73□□□□□ -1.97
CTHRC1Q96CG8 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.73□□□□□ -1.97
CTHRC1Q96CG8 AC000403.1-201ENST00000613696 3585 ntBASIC2.72□□□□□ -1.97
CTHRC1Q96CG8 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.72□□□□□ -1.97
CTHRC1Q96CG8 Y_RNA.183-201ENST00000363882 113 ntBASIC2.72□□□□□ -1.97
CTHRC1Q96CG8 RNU6-770P-201ENST00000363929 105 ntBASIC2.72□□□□□ -1.97
CTHRC1Q96CG8 Y_RNA.214-201ENST00000364201 112 ntBASIC2.72□□□□□ -1.97
CTHRC1Q96CG8 SET-203ENST00000372688 801 ntTSL 2 BASIC2.72□□□□□ -1.97
CTHRC1Q96CG8 Y_RNA.452-201ENST00000384202 108 ntBASIC2.72□□□□□ -1.97
CTHRC1Q96CG8 RNU6-611P-201ENST00000384276 104 ntBASIC2.72□□□□□ -1.97
CTHRC1Q96CG8 RNA5SP344-201ENST00000411081 104 ntBASIC2.72□□□□□ -1.97
CTHRC1Q96CG8 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.72□□□□□ -1.97
CTHRC1Q96CG8 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.72□□□□□ -1.97
CTHRC1Q96CG8 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.72□□□□□ -1.97
CTHRC1Q96CG8 RPEP5-201ENST00000441137 268 ntBASIC2.72□□□□□ -1.97
CTHRC1Q96CG8 AL731563.1-201ENST00000442202 214 ntBASIC2.72□□□□□ -1.97
CTHRC1Q96CG8 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.72□□□□□ -1.97
CTHRC1Q96CG8 AC010469.2-201ENST00000496412 480 ntBASIC2.72□□□□□ -1.97
CTHRC1Q96CG8 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.72□□□□□ -1.97
CTHRC1Q96CG8 RNU6-397P-201ENST00000516226 104 ntBASIC2.72□□□□□ -1.97
CTHRC1Q96CG8 RNU6-897P-201ENST00000517135 105 ntBASIC2.72□□□□□ -1.97
CTHRC1Q96CG8 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.72□□□□□ -1.97
CTHRC1Q96CG8 AC093023.1-201ENST00000547375 507 ntBASIC2.72□□□□□ -1.97
CTHRC1Q96CG8 AC004817.2-201ENST00000561794 651 ntBASIC2.72□□□□□ -1.97
CTHRC1Q96CG8 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.72□□□□□ -1.97
CTHRC1Q96CG8 RPL30P11-203ENST00000598995 310 ntBASIC2.72□□□□□ -1.97
CTHRC1Q96CG8 PCGEM1.1-201ENST00000613431 131 ntBASIC2.72□□□□□ -1.97
CTHRC1Q96CG8 AC010205.1-201ENST00000616668 449 ntBASIC2.72□□□□□ -1.97
CTHRC1Q96CG8 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.72□□□□□ -1.97
CTHRC1Q96CG8 U6.92-201ENST00000636464 89 ntBASIC2.72□□□□□ -1.97
CTHRC1Q96CG8 MIR7515-201ENST00000637837 67 ntBASIC2.72□□□□□ -1.97
CTHRC1Q96CG8 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
CTHRC1Q96CG8 AC069528.2-201ENST00000624849 1991 ntBASIC2.72□□□□□ -1.97
CTHRC1Q96CG8 ZNF204P-201ENST00000416749 2397 ntBASIC2.72□□□□□ -1.97
CTHRC1Q96CG8 BX322639.1-202ENST00000423987 2213 ntBASIC2.72□□□□□ -1.97
CTHRC1Q96CG8 AC010329.5-201ENST00000623497 2174 ntBASIC2.71□□□□□ -1.97
CTHRC1Q96CG8 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.71□□□□□ -1.98
CTHRC1Q96CG8 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
CTHRC1Q96CG8 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CTHRC1Q96CG8 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.71□□□□□ -1.98
CTHRC1Q96CG8 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CTHRC1Q96CG8 RNU4-15P-201ENST00000362613 141 ntBASIC2.71□□□□□ -1.98
CTHRC1Q96CG8 RNU1-35P-201ENST00000362782 153 ntBASIC2.71□□□□□ -1.98
CTHRC1Q96CG8 U3.9-201ENST00000363823 204 ntBASIC2.71□□□□□ -1.98
CTHRC1Q96CG8 RNU6-378P-201ENST00000384324 107 ntBASIC2.71□□□□□ -1.98
CTHRC1Q96CG8 MIR487A-201ENST00000385009 80 ntBASIC2.71□□□□□ -1.98
CTHRC1Q96CG8 RNA5SP213-201ENST00000391031 106 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 207.5 ms