Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 MTCO3P10-201ENST00000455912 772 ntBASIC-0.22□□□□□ -2.44
SPTSSBQ8NFR3 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC-0.22□□□□□ -2.44
SPTSSBQ8NFR3 AHI1-208ENST00000488690 712 ntTSL 5 BASIC-0.22□□□□□ -2.44
SPTSSBQ8NFR3 RPS23P5-201ENST00000495419 428 ntBASIC-0.22□□□□□ -2.44
SPTSSBQ8NFR3 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC-0.22□□□□□ -2.44
SPTSSBQ8NFR3 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.22□□□□□ -2.44
SPTSSBQ8NFR3 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC-0.22□□□□□ -2.44
SPTSSBQ8NFR3 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC-0.22□□□□□ -2.44
SPTSSBQ8NFR3 AC023827.1-201ENST00000569247 97 ntBASIC-0.22□□□□□ -2.44
SPTSSBQ8NFR3 TMF1P1-201ENST00000576058 373 ntBASIC-0.22□□□□□ -2.44
SPTSSBQ8NFR3 AF131215.7-201ENST00000602443 707 ntBASIC-0.22□□□□□ -2.44
SPTSSBQ8NFR3 AC023932.2-201ENST00000603176 175 ntBASIC-0.22□□□□□ -2.44
SPTSSBQ8NFR3 MESTIT1_1.1-201ENST00000618871 140 ntBASIC-0.22□□□□□ -2.44
SPTSSBQ8NFR3 AP000484.1-201ENST00000620067 1252 ntBASIC-0.22□□□□□ -2.44
SPTSSBQ8NFR3 AC097460.3-201ENST00000623099 442 ntBASIC-0.22□□□□□ -2.44
SPTSSBQ8NFR3 FRG1KP-201ENST00000623592 341 ntBASIC-0.22□□□□□ -2.44
SPTSSBQ8NFR3 AC008133.2-201ENST00000624540 351 ntBASIC-0.22□□□□□ -2.44
SPTSSBQ8NFR3 U4.7-201ENST00000638126 106 ntBASIC-0.22□□□□□ -2.44
SPTSSBQ8NFR3 AC092104.1-201ENST00000497346 1441 ntBASIC-0.22□□□□□ -2.45
SPTSSBQ8NFR3 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC-0.23□□□□□ -2.45
SPTSSBQ8NFR3 RNU6-105P-201ENST00000363909 104 ntBASIC-0.23□□□□□ -2.45
SPTSSBQ8NFR3 RNA5SP99-201ENST00000364020 114 ntBASIC-0.23□□□□□ -2.45
SPTSSBQ8NFR3 RNU6-960P-201ENST00000364056 120 ntBASIC-0.23□□□□□ -2.45
SPTSSBQ8NFR3 RNU1-133P-201ENST00000364867 167 ntBASIC-0.23□□□□□ -2.45
SPTSSBQ8NFR3 MIR578-201ENST00000384828 96 ntBASIC-0.23□□□□□ -2.45
SPTSSBQ8NFR3 MIR518A1-201ENST00000385068 85 ntBASIC-0.23□□□□□ -2.45
SPTSSBQ8NFR3 MIR300-201ENST00000401138 83 ntBASIC-0.23□□□□□ -2.45
SPTSSBQ8NFR3 RNA5SP247-201ENST00000411181 105 ntBASIC-0.23□□□□□ -2.45
SPTSSBQ8NFR3 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.23□□□□□ -2.45
SPTSSBQ8NFR3 USP9YP28-201ENST00000435142 589 ntBASIC-0.23□□□□□ -2.45
SPTSSBQ8NFR3 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC-0.23□□□□□ -2.45
SPTSSBQ8NFR3 MTCO2P18-201ENST00000457151 658 ntBASIC-0.23□□□□□ -2.45
SPTSSBQ8NFR3 TPT1P7-201ENST00000458300 517 ntBASIC-0.23□□□□□ -2.45
SPTSSBQ8NFR3 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC-0.23□□□□□ -2.45
SPTSSBQ8NFR3 RNU6-1146P-201ENST00000516282 102 ntBASIC-0.23□□□□□ -2.45
SPTSSBQ8NFR3 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-0.23□□□□□ -2.45
SPTSSBQ8NFR3 LRRC6P1-201ENST00000532188 885 ntBASIC-0.23□□□□□ -2.45
SPTSSBQ8NFR3 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC-0.23□□□□□ -2.45
SPTSSBQ8NFR3 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC-0.23□□□□□ -2.45
SPTSSBQ8NFR3 MIR4778-201ENST00000577635 80 ntBASIC-0.23□□□□□ -2.45
SPTSSBQ8NFR3 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC-0.23□□□□□ -2.45
SPTSSBQ8NFR3 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC-0.23□□□□□ -2.45
SPTSSBQ8NFR3 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC-0.24□□□□□ -2.45
SPTSSBQ8NFR3 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC-0.24□□□□□ -2.45
SPTSSBQ8NFR3 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC-0.24□□□□□ -2.45
SPTSSBQ8NFR3 MIR103A2-201ENST00000362154 78 ntBASIC-0.24□□□□□ -2.45
SPTSSBQ8NFR3 RNU6-545P-201ENST00000362681 104 ntBASIC-0.24□□□□□ -2.45
SPTSSBQ8NFR3 RNU4-56P-201ENST00000364700 142 ntBASIC-0.24□□□□□ -2.45
SPTSSBQ8NFR3 RNU5E-7P-201ENST00000365290 117 ntBASIC-0.24□□□□□ -2.45
SPTSSBQ8NFR3 RNU6-43P-201ENST00000384302 107 ntBASIC-0.24□□□□□ -2.45
SPTSSBQ8NFR3 MIR520F-201ENST00000384824 87 ntBASIC-0.24□□□□□ -2.45
SPTSSBQ8NFR3 RNU6-440P-201ENST00000390882 105 ntBASIC-0.24□□□□□ -2.45
SPTSSBQ8NFR3 RNA5SP467-201ENST00000391274 118 ntBASIC-0.24□□□□□ -2.45
SPTSSBQ8NFR3 MIR1827-201ENST00000408549 66 ntBASIC-0.24□□□□□ -2.45
SPTSSBQ8NFR3 AC244670.1-201ENST00000436879 112 ntBASIC-0.24□□□□□ -2.45
SPTSSBQ8NFR3 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC-0.24□□□□□ -2.45
SPTSSBQ8NFR3 STAG3L5P-204ENST00000443759 179 ntBASIC-0.24□□□□□ -2.45
SPTSSBQ8NFR3 MTCYBP42-201ENST00000444653 1130 ntBASIC-0.24□□□□□ -2.45
SPTSSBQ8NFR3 Z73417.1-201ENST00000447373 778 ntBASIC-0.24□□□□□ -2.45
SPTSSBQ8NFR3 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.24□□□□□ -2.45
SPTSSBQ8NFR3 LINC01399-202ENST00000458450 244 ntBASIC-0.24□□□□□ -2.45
SPTSSBQ8NFR3 RBBP4P6-201ENST00000508098 202 ntBASIC-0.24□□□□□ -2.45
SPTSSBQ8NFR3 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC-0.24□□□□□ -2.45
SPTSSBQ8NFR3 AP000889.1-201ENST00000530968 660 ntBASIC-0.24□□□□□ -2.45
SPTSSBQ8NFR3 NDUFAF4P1-201ENST00000559425 519 ntBASIC-0.24□□□□□ -2.45
SPTSSBQ8NFR3 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC-0.24□□□□□ -2.45
SPTSSBQ8NFR3 AC009994.1-201ENST00000606889 253 ntBASIC-0.24□□□□□ -2.45
SPTSSBQ8NFR3 AC097372.5-201ENST00000623665 376 ntBASIC-0.24□□□□□ -2.45
SPTSSBQ8NFR3 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC-0.24□□□□□ -2.45
SPTSSBQ8NFR3 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC-0.25□□□□□ -2.45
SPTSSBQ8NFR3 SNORA32.1-201ENST00000364514 115 ntBASIC-0.25□□□□□ -2.45
SPTSSBQ8NFR3 RNY4P16-201ENST00000364768 94 ntBASIC-0.25□□□□□ -2.45
SPTSSBQ8NFR3 RNU6-378P-201ENST00000384324 107 ntBASIC-0.25□□□□□ -2.45
SPTSSBQ8NFR3 RNU6-1179P-201ENST00000384667 107 ntBASIC-0.25□□□□□ -2.45
SPTSSBQ8NFR3 RNU6-417P-201ENST00000384712 107 ntBASIC-0.25□□□□□ -2.45
SPTSSBQ8NFR3 MIR573-201ENST00000384964 99 ntBASIC-0.25□□□□□ -2.45
SPTSSBQ8NFR3 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC-0.25□□□□□ -2.45
SPTSSBQ8NFR3 MIR1283-1-201ENST00000408494 87 ntBASIC-0.25□□□□□ -2.45
SPTSSBQ8NFR3 Y_RNA.595-201ENST00000410403 105 ntBASIC-0.25□□□□□ -2.45
SPTSSBQ8NFR3 AL356583.2-201ENST00000426536 280 ntBASIC-0.25□□□□□ -2.45
SPTSSBQ8NFR3 AC078809.1-201ENST00000427601 140 ntBASIC-0.25□□□□□ -2.45
SPTSSBQ8NFR3 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC-0.25□□□□□ -2.45
SPTSSBQ8NFR3 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC-0.25□□□□□ -2.45
SPTSSBQ8NFR3 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC-0.25□□□□□ -2.45
SPTSSBQ8NFR3 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-0.25□□□□□ -2.45
SPTSSBQ8NFR3 AC112206.4-201ENST00000515142 405 ntBASIC-0.25□□□□□ -2.45
SPTSSBQ8NFR3 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC-0.25□□□□□ -2.45
SPTSSBQ8NFR3 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC-0.25□□□□□ -2.45
SPTSSBQ8NFR3 AL162424.1-201ENST00000602325 221 ntBASIC-0.25□□□□□ -2.45
SPTSSBQ8NFR3 AC026741.1-201ENST00000605892 482 ntBASIC-0.25□□□□□ -2.45
SPTSSBQ8NFR3 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC-0.25□□□□□ -2.45
SPTSSBQ8NFR3 AC005520.5-201ENST00000613926 164 ntBASIC-0.25□□□□□ -2.45
SPTSSBQ8NFR3 AC092634.7-201ENST00000621022 103 ntBASIC-0.25□□□□□ -2.45
SPTSSBQ8NFR3 SNORA63.3-201ENST00000362682 132 ntBASIC-0.26□□□□□ -2.45
SPTSSBQ8NFR3 RNU6-37P-201ENST00000362692 107 ntBASIC-0.26□□□□□ -2.45
SPTSSBQ8NFR3 Y_RNA.191-201ENST00000363972 113 ntBASIC-0.26□□□□□ -2.45
SPTSSBQ8NFR3 RNU6-11P-201ENST00000364234 107 ntBASIC-0.26□□□□□ -2.45
SPTSSBQ8NFR3 Y_RNA.330-201ENST00000365230 109 ntBASIC-0.26□□□□□ -2.45
SPTSSBQ8NFR3 RNU6-1-201ENST00000383898 107 ntBASIC-0.26□□□□□ -2.45
SPTSSBQ8NFR3 RNU6-468P-201ENST00000384003 109 ntBASIC-0.26□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 132.8 ms