Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 RNU1-86P-201ENST00000516108 154 ntBASIC0.07□□□□□ -2.4
TMEM35BQ8NCS4 RNU1-107P-201ENST00000516617 154 ntBASIC0.07□□□□□ -2.4
TMEM35BQ8NCS4 Z98751.3-201ENST00000604447 521 ntBASIC0.07□□□□□ -2.4
TMEM35BQ8NCS4 RPL17P51-201ENST00000605218 238 ntBASIC0.07□□□□□ -2.4
TMEM35BQ8NCS4 PRELID3BP2-201ENST00000605362 201 ntBASIC0.07□□□□□ -2.4
TMEM35BQ8NCS4 AC245297.2-201ENST00000610119 565 ntBASIC0.07□□□□□ -2.4
TMEM35BQ8NCS4 AL603839.4-201ENST00000624658 1005 ntBASIC0.07□□□□□ -2.4
TMEM35BQ8NCS4 AC006927.2-201ENST00000639256 389 ntBASIC0.07□□□□□ -2.4
TMEM35BQ8NCS4 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.06□□□□□ -2.4
TMEM35BQ8NCS4 RNU4-76P-201ENST00000364509 141 ntBASIC0.06□□□□□ -2.4
TMEM35BQ8NCS4 RNU6-418P-201ENST00000384035 107 ntBASIC0.06□□□□□ -2.4
TMEM35BQ8NCS4 SNORD89-201ENST00000390981 114 ntBASIC0.06□□□□□ -2.4
TMEM35BQ8NCS4 RNU2-62P-201ENST00000410868 191 ntBASIC0.06□□□□□ -2.4
TMEM35BQ8NCS4 AC244098.3-201ENST00000424803 96 ntBASIC0.06□□□□□ -2.4
TMEM35BQ8NCS4 USP9YP11-201ENST00000427537 717 ntBASIC0.06□□□□□ -2.4
TMEM35BQ8NCS4 MTND5P2-201ENST00000442927 1142 ntBASIC0.06□□□□□ -2.4
TMEM35BQ8NCS4 RPL39P39-201ENST00000455840 151 ntBASIC0.06□□□□□ -2.4
TMEM35BQ8NCS4 RNA5SP216-201ENST00000516111 123 ntBASIC0.06□□□□□ -2.4
TMEM35BQ8NCS4 RNU6-751P-201ENST00000516382 101 ntBASIC0.06□□□□□ -2.4
TMEM35BQ8NCS4 AC087854.1-201ENST00000519706 414 ntBASIC0.06□□□□□ -2.4
TMEM35BQ8NCS4 AP002453.2-201ENST00000533503 320 ntBASIC0.06□□□□□ -2.4
TMEM35BQ8NCS4 MIR3923-201ENST00000579521 83 ntBASIC0.06□□□□□ -2.4
TMEM35BQ8NCS4 AL513423.1-201ENST00000621695 132 ntBASIC0.06□□□□□ -2.4
TMEM35BQ8NCS4 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
TMEM35BQ8NCS4 RNU6-105P-201ENST00000363909 104 ntBASIC0.05□□□□□ -2.4
TMEM35BQ8NCS4 RNU6-1141P-201ENST00000364520 107 ntBASIC0.05□□□□□ -2.4
TMEM35BQ8NCS4 RNU6-342P-201ENST00000384521 104 ntBASIC0.05□□□□□ -2.4
TMEM35BQ8NCS4 AL034345.1-201ENST00000407768 123 ntBASIC0.05□□□□□ -2.4
TMEM35BQ8NCS4 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.05□□□□□ -2.4
TMEM35BQ8NCS4 AC244670.1-201ENST00000436879 112 ntBASIC0.05□□□□□ -2.4
TMEM35BQ8NCS4 HMGN2P34-201ENST00000437647 269 ntBASIC0.05□□□□□ -2.4
TMEM35BQ8NCS4 AC243964.1-201ENST00000441814 261 ntBASIC0.05□□□□□ -2.4
TMEM35BQ8NCS4 AL360271.2-201ENST00000447710 161 ntBASIC0.05□□□□□ -2.4
TMEM35BQ8NCS4 AL133217.1-201ENST00000450980 425 ntBASIC0.05□□□□□ -2.4
TMEM35BQ8NCS4 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.05□□□□□ -2.4
TMEM35BQ8NCS4 HMGB1P29-201ENST00000505659 499 ntBASIC0.05□□□□□ -2.4
TMEM35BQ8NCS4 RNU2-34P-201ENST00000516534 121 ntBASIC0.05□□□□□ -2.4
TMEM35BQ8NCS4 AC022784.5-201ENST00000522241 437 ntBASIC0.05□□□□□ -2.4
TMEM35BQ8NCS4 AC024995.1-201ENST00000523014 93 ntBASIC0.05□□□□□ -2.4
TMEM35BQ8NCS4 RN7SL793P-201ENST00000583259 296 ntBASIC0.05□□□□□ -2.4
TMEM35BQ8NCS4 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC0.05□□□□□ -2.4
TMEM35BQ8NCS4 U4.7-201ENST00000638126 106 ntBASIC0.05□□□□□ -2.4
TMEM35BQ8NCS4 Y_RNA.311-201ENST00000365068 96 ntBASIC0.04□□□□□ -2.4
TMEM35BQ8NCS4 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
TMEM35BQ8NCS4 RNU6-43P-201ENST00000384302 107 ntBASIC0.04□□□□□ -2.4
TMEM35BQ8NCS4 AL355796.1-201ENST00000406706 323 ntBASIC0.04□□□□□ -2.4
TMEM35BQ8NCS4 MIR1295A-201ENST00000408463 79 ntBASIC0.04□□□□□ -2.4
TMEM35BQ8NCS4 RNU6-1245P-201ENST00000411130 106 ntBASIC0.04□□□□□ -2.4
TMEM35BQ8NCS4 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.04□□□□□ -2.4
TMEM35BQ8NCS4 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.04□□□□□ -2.4
TMEM35BQ8NCS4 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC0.04□□□□□ -2.4
TMEM35BQ8NCS4 AC022364.2-201ENST00000457963 554 ntBASIC0.04□□□□□ -2.4
TMEM35BQ8NCS4 RPS23P5-201ENST00000495419 428 ntBASIC0.04□□□□□ -2.4
TMEM35BQ8NCS4 AC021146.8-201ENST00000507455 733 ntBASIC0.04□□□□□ -2.4
TMEM35BQ8NCS4 AK3P2-201ENST00000507976 429 ntBASIC0.04□□□□□ -2.4
TMEM35BQ8NCS4 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.04□□□□□ -2.4
TMEM35BQ8NCS4 AC106038.2-201ENST00000520706 568 ntBASIC0.04□□□□□ -2.4
TMEM35BQ8NCS4 AC090049.2-201ENST00000550377 109 ntBASIC0.04□□□□□ -2.4
TMEM35BQ8NCS4 EIF4A1P12-201ENST00000551910 141 ntBASIC0.04□□□□□ -2.4
TMEM35BQ8NCS4 MIR4514-201ENST00000581410 57 ntBASIC0.04□□□□□ -2.4
TMEM35BQ8NCS4 AL357312.1-201ENST00000603879 298 ntBASIC0.04□□□□□ -2.4
TMEM35BQ8NCS4 AC097065.2-201ENST00000608159 533 ntBASIC0.04□□□□□ -2.4
TMEM35BQ8NCS4 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.04□□□□□ -2.4
TMEM35BQ8NCS4 7SK.10-201ENST00000621414 298 ntBASIC0.04□□□□□ -2.4
TMEM35BQ8NCS4 AP002782.1-201ENST00000623107 614 ntBASIC0.04□□□□□ -2.4
TMEM35BQ8NCS4 AC100810.6-201ENST00000638068 285 ntBASIC0.04□□□□□ -2.4
TMEM35BQ8NCS4 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.03□□□□□ -2.4
TMEM35BQ8NCS4 RNU6-462P-201ENST00000362659 105 ntBASIC0.03□□□□□ -2.4
TMEM35BQ8NCS4 SNORA63.3-201ENST00000362682 132 ntBASIC0.03□□□□□ -2.4
TMEM35BQ8NCS4 RNU4-67P-201ENST00000364569 141 ntBASIC0.03□□□□□ -2.4
TMEM35BQ8NCS4 RNU4-48P-201ENST00000365559 182 ntBASIC0.03□□□□□ -2.4
TMEM35BQ8NCS4 Y_RNA.393-201ENST00000383936 102 ntBASIC0.03□□□□□ -2.4
TMEM35BQ8NCS4 RNY1P8-201ENST00000383970 114 ntBASIC0.03□□□□□ -2.4
TMEM35BQ8NCS4 SNORA36.2-201ENST00000384004 127 ntBASIC0.03□□□□□ -2.4
TMEM35BQ8NCS4 SNORA12.1-201ENST00000390873 148 ntBASIC0.03□□□□□ -2.4
TMEM35BQ8NCS4 Y_RNA.578-201ENST00000390903 88 ntBASIC0.03□□□□□ -2.4
TMEM35BQ8NCS4 RN7SKP200-201ENST00000410564 320 ntBASIC0.03□□□□□ -2.4
TMEM35BQ8NCS4 USP9YP28-201ENST00000435142 589 ntBASIC0.03□□□□□ -2.4
TMEM35BQ8NCS4 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.03□□□□□ -2.4
TMEM35BQ8NCS4 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.03□□□□□ -2.4
TMEM35BQ8NCS4 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.03□□□□□ -2.4
TMEM35BQ8NCS4 AC023932.2-201ENST00000603176 175 ntBASIC0.03□□□□□ -2.4
TMEM35BQ8NCS4 AL596327.1-201ENST00000603629 213 ntBASIC0.03□□□□□ -2.4
TMEM35BQ8NCS4 MIR6718-201ENST00000616153 80 ntBASIC0.03□□□□□ -2.4
TMEM35BQ8NCS4 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
TMEM35BQ8NCS4 Y_RNA.192-201ENST00000363977 102 ntBASIC0.02□□□□□ -2.41
TMEM35BQ8NCS4 MIR660-201ENST00000385235 97 ntBASIC0.02□□□□□ -2.41
TMEM35BQ8NCS4 SNORA26.3-201ENST00000391119 136 ntBASIC0.02□□□□□ -2.41
TMEM35BQ8NCS4 AL451046.2-201ENST00000403074 277 ntBASIC0.02□□□□□ -2.41
TMEM35BQ8NCS4 RNA5SP222-201ENST00000411039 105 ntBASIC0.02□□□□□ -2.41
TMEM35BQ8NCS4 TIMM9P3-201ENST00000428659 274 ntBASIC0.02□□□□□ -2.41
TMEM35BQ8NCS4 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.02□□□□□ -2.41
TMEM35BQ8NCS4 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.02□□□□□ -2.41
TMEM35BQ8NCS4 AL117351.1-201ENST00000438864 766 ntBASIC0.02□□□□□ -2.41
TMEM35BQ8NCS4 AC245047.8-201ENST00000456455 284 ntBASIC0.02□□□□□ -2.41
TMEM35BQ8NCS4 SNRPGP7-201ENST00000469016 106 ntBASIC0.02□□□□□ -2.41
TMEM35BQ8NCS4 AP003072.2-201ENST00000527756 676 ntBASIC0.02□□□□□ -2.41
TMEM35BQ8NCS4 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.02□□□□□ -2.41
TMEM35BQ8NCS4 TMF1P1-201ENST00000576058 373 ntBASIC0.02□□□□□ -2.41
TMEM35BQ8NCS4 AC011195.1-201ENST00000578177 177 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms