Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AC078795.3-201ENST00000602913 472 ntBASIC1.63□□□□□ -2.15
CCDC71LQ8N9Z2 AL078605.1-201ENST00000603529 500 ntBASIC1.63□□□□□ -2.15
CCDC71LQ8N9Z2 AC009248.2-201ENST00000619826 254 ntBASIC1.63□□□□□ -2.15
CCDC71LQ8N9Z2 SNORA43.4-201ENST00000629559 138 ntBASIC1.63□□□□□ -2.15
CCDC71LQ8N9Z2 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
CCDC71LQ8N9Z2 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
CCDC71LQ8N9Z2 AP000560.1-201ENST00000624150 1937 ntBASIC1.62□□□□□ -2.15
CCDC71LQ8N9Z2 CASC19-280ENST00000642102 1351 ntBASIC1.62□□□□□ -2.15
CCDC71LQ8N9Z2 RNU6-234P-201ENST00000365229 104 ntBASIC1.62□□□□□ -2.15
CCDC71LQ8N9Z2 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
CCDC71LQ8N9Z2 RNU6-876P-201ENST00000391295 104 ntBASIC1.62□□□□□ -2.15
CCDC71LQ8N9Z2 RNA5SP450-201ENST00000411206 102 ntBASIC1.62□□□□□ -2.15
CCDC71LQ8N9Z2 EIF1AXP1-201ENST00000419267 435 ntBASIC1.62□□□□□ -2.15
CCDC71LQ8N9Z2 AL645568.3-201ENST00000433683 316 ntBASIC1.62□□□□□ -2.15
CCDC71LQ8N9Z2 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.62□□□□□ -2.15
CCDC71LQ8N9Z2 PPP1R2P5-201ENST00000457256 603 ntBASIC1.62□□□□□ -2.15
CCDC71LQ8N9Z2 ANXA2P1-201ENST00000505539 926 ntBASIC1.62□□□□□ -2.15
CCDC71LQ8N9Z2 PTP4A1P4-201ENST00000512479 322 ntBASIC1.62□□□□□ -2.15
CCDC71LQ8N9Z2 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.62□□□□□ -2.15
CCDC71LQ8N9Z2 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.62□□□□□ -2.15
CCDC71LQ8N9Z2 HSBP1P1-201ENST00000555205 166 ntBASIC1.62□□□□□ -2.15
CCDC71LQ8N9Z2 AC021231.3-201ENST00000558497 370 ntBASIC1.62□□□□□ -2.15
CCDC71LQ8N9Z2 AC109446.1-201ENST00000566172 220 ntBASIC1.62□□□□□ -2.15
CCDC71LQ8N9Z2 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.62□□□□□ -2.15
CCDC71LQ8N9Z2 MIR3923-201ENST00000579521 83 ntBASIC1.62□□□□□ -2.15
CCDC71LQ8N9Z2 AL133215.3-201ENST00000609801 448 ntBASIC1.62□□□□□ -2.15
CCDC71LQ8N9Z2 MIR8076-201ENST00000611401 83 ntBASIC1.62□□□□□ -2.15
CCDC71LQ8N9Z2 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.62□□□□□ -2.15
CCDC71LQ8N9Z2 MIR597-201ENST00000384968 97 ntBASIC1.61□□□□□ -2.15
CCDC71LQ8N9Z2 MIR517A-201ENST00000385001 87 ntBASIC1.61□□□□□ -2.15
CCDC71LQ8N9Z2 MIR1294-201ENST00000408503 142 ntBASIC1.61□□□□□ -2.15
CCDC71LQ8N9Z2 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.61□□□□□ -2.15
CCDC71LQ8N9Z2 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
CCDC71LQ8N9Z2 AL353572.1-201ENST00000442490 417 ntBASIC1.61□□□□□ -2.15
CCDC71LQ8N9Z2 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.61□□□□□ -2.15
CCDC71LQ8N9Z2 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CCDC71LQ8N9Z2 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.61□□□□□ -2.15
CCDC71LQ8N9Z2 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.61□□□□□ -2.15
CCDC71LQ8N9Z2 snoU13.6-201ENST00000458785 104 ntBASIC1.61□□□□□ -2.15
CCDC71LQ8N9Z2 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.61□□□□□ -2.15
CCDC71LQ8N9Z2 AC021146.2-201ENST00000504736 556 ntBASIC1.61□□□□□ -2.15
CCDC71LQ8N9Z2 AC093259.1-201ENST00000509755 300 ntBASIC1.61□□□□□ -2.15
CCDC71LQ8N9Z2 RNU6-566P-201ENST00000516790 107 ntBASIC1.61□□□□□ -2.15
CCDC71LQ8N9Z2 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.61□□□□□ -2.15
CCDC71LQ8N9Z2 IGKV3-31-201ENST00000523109 329 ntBASIC1.61□□□□□ -2.15
CCDC71LQ8N9Z2 MRPS36P4-201ENST00000534436 298 ntBASIC1.61□□□□□ -2.15
CCDC71LQ8N9Z2 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.61□□□□□ -2.15
CCDC71LQ8N9Z2 CPDP1-201ENST00000579660 283 ntBASIC1.61□□□□□ -2.15
CCDC71LQ8N9Z2 AC011712.1-201ENST00000588959 234 ntBASIC1.61□□□□□ -2.15
CCDC71LQ8N9Z2 Z98751.3-201ENST00000604447 521 ntBASIC1.61□□□□□ -2.15
CCDC71LQ8N9Z2 AC019193.3-201ENST00000609144 554 ntBASIC1.61□□□□□ -2.15
CCDC71LQ8N9Z2 AL450472.1-202ENST00000637286 180 ntBASIC1.61□□□□□ -2.15
CCDC71LQ8N9Z2 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
CCDC71LQ8N9Z2 CBX3P1-201ENST00000325243 554 ntBASIC1.6□□□□□ -2.15
CCDC71LQ8N9Z2 Y_RNA.135-201ENST00000363439 95 ntBASIC1.6□□□□□ -2.15
CCDC71LQ8N9Z2 Y_RNA.160-201ENST00000363677 92 ntBASIC1.6□□□□□ -2.15
CCDC71LQ8N9Z2 RNU6-968P-201ENST00000384076 107 ntBASIC1.6□□□□□ -2.15
CCDC71LQ8N9Z2 RNU6-378P-201ENST00000384324 107 ntBASIC1.6□□□□□ -2.15
CCDC71LQ8N9Z2 RNU6-306P-201ENST00000384617 107 ntBASIC1.6□□□□□ -2.15
CCDC71LQ8N9Z2 RNU11-3P-201ENST00000391111 133 ntBASIC1.6□□□□□ -2.15
CCDC71LQ8N9Z2 RNU6-510P-201ENST00000391239 108 ntBASIC1.6□□□□□ -2.15
CCDC71LQ8N9Z2 MIR208B-201ENST00000401172 77 ntBASIC1.6□□□□□ -2.15
CCDC71LQ8N9Z2 AL139156.1-201ENST00000412785 841 ntBASIC1.6□□□□□ -2.15
CCDC71LQ8N9Z2 AC244636.1-201ENST00000421152 228 ntBASIC1.6□□□□□ -2.15
CCDC71LQ8N9Z2 AC012306.1-201ENST00000423267 114 ntBASIC1.6□□□□□ -2.15
CCDC71LQ8N9Z2 HMGN2P3-201ENST00000433603 273 ntBASIC1.6□□□□□ -2.15
CCDC71LQ8N9Z2 HMGN2P5-201ENST00000436882 273 ntBASIC1.6□□□□□ -2.15
CCDC71LQ8N9Z2 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.6□□□□□ -2.15
CCDC71LQ8N9Z2 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.6□□□□□ -2.15
CCDC71LQ8N9Z2 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.6□□□□□ -2.15
CCDC71LQ8N9Z2 RNU6-329P-201ENST00000459618 107 ntBASIC1.6□□□□□ -2.15
CCDC71LQ8N9Z2 Y_RNA.682-201ENST00000516457 100 ntBASIC1.6□□□□□ -2.15
CCDC71LQ8N9Z2 AC018630.3-201ENST00000542637 96 ntBASIC1.6□□□□□ -2.15
CCDC71LQ8N9Z2 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.6□□□□□ -2.15
CCDC71LQ8N9Z2 MIR3122-201ENST00000577243 73 ntBASIC1.6□□□□□ -2.15
CCDC71LQ8N9Z2 AC024614.2-201ENST00000577584 372 ntBASIC1.6□□□□□ -2.15
CCDC71LQ8N9Z2 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.6□□□□□ -2.15
CCDC71LQ8N9Z2 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.6□□□□□ -2.15
CCDC71LQ8N9Z2 MIR4742-201ENST00000581069 85 ntBASIC1.6□□□□□ -2.15
CCDC71LQ8N9Z2 POLR3GP2-201ENST00000588366 668 ntBASIC1.6□□□□□ -2.15
CCDC71LQ8N9Z2 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.6□□□□□ -2.15
CCDC71LQ8N9Z2 AL359314.1-201ENST00000616913 261 ntBASIC1.6□□□□□ -2.15
CCDC71LQ8N9Z2 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.6□□□□□ -2.15
CCDC71LQ8N9Z2 AL133216.2-202ENST00000634512 349 ntBASIC1.6□□□□□ -2.15
CCDC71LQ8N9Z2 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
CCDC71LQ8N9Z2 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.59□□□□□ -2.15
CCDC71LQ8N9Z2 RNA5SP289-201ENST00000362332 137 ntBASIC1.59□□□□□ -2.15
CCDC71LQ8N9Z2 RNU6-1164P-201ENST00000364428 107 ntBASIC1.59□□□□□ -2.15
CCDC71LQ8N9Z2 Y_RNA.301-201ENST00000364990 103 ntBASIC1.59□□□□□ -2.15
CCDC71LQ8N9Z2 SNORA29-201ENST00000384183 140 ntBASIC1.59□□□□□ -2.15
CCDC71LQ8N9Z2 SNORD14D-201ENST00000384390 87 ntBASIC1.59□□□□□ -2.15
CCDC71LQ8N9Z2 SNORA26.3-201ENST00000391119 136 ntBASIC1.59□□□□□ -2.15
CCDC71LQ8N9Z2 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.59□□□□□ -2.15
CCDC71LQ8N9Z2 AL445685.2-201ENST00000422551 342 ntBASIC1.59□□□□□ -2.15
CCDC71LQ8N9Z2 CBX3P6-201ENST00000430257 527 ntBASIC1.59□□□□□ -2.15
CCDC71LQ8N9Z2 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.59□□□□□ -2.15
CCDC71LQ8N9Z2 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.59□□□□□ -2.15
CCDC71LQ8N9Z2 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.59□□□□□ -2.15
CCDC71LQ8N9Z2 MTCO2P30-201ENST00000503662 364 ntBASIC1.59□□□□□ -2.15
CCDC71LQ8N9Z2 RNU6-567P-201ENST00000516746 107 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 139.4 ms