Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 RBMY2UP-201ENST00000453474 324 ntBASIC4.16□□□□□ -1.74
SIX5Q8N196 AL031183.1-201ENST00000457667 207 ntBASIC4.16□□□□□ -1.74
SIX5Q8N196 AC146507.2-201ENST00000460608 476 ntBASIC4.16□□□□□ -1.74
SIX5Q8N196 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC4.16□□□□□ -1.74
SIX5Q8N196 RNU6ATAC13P-201ENST00000516152 131 ntBASIC4.16□□□□□ -1.74
SIX5Q8N196 SNORD116-25-201ENST00000516517 92 ntBASIC4.16□□□□□ -1.74
SIX5Q8N196 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC4.16□□□□□ -1.74
SIX5Q8N196 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.16□□□□□ -1.74
SIX5Q8N196 Y_RNA.778-201ENST00000620203 90 ntBASIC4.16□□□□□ -1.74
SIX5Q8N196 AC008873.1-201ENST00000625051 138 ntBASIC4.16□□□□□ -1.74
SIX5Q8N196 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.16□□□□□ -1.74
SIX5Q8N196 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.16□□□□□ -1.74
SIX5Q8N196 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.16□□□□□ -1.74
SIX5Q8N196 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.15□□□□□ -1.74
SIX5Q8N196 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC4.15□□□□□ -1.74
SIX5Q8N196 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
SIX5Q8N196 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
SIX5Q8N196 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SIX5Q8N196 RNU6-1305P-201ENST00000364353 104 ntBASIC4.15□□□□□ -1.75
SIX5Q8N196 RNA5SP22-201ENST00000365393 109 ntBASIC4.15□□□□□ -1.75
SIX5Q8N196 Y_RNA.456-201ENST00000384232 111 ntBASIC4.15□□□□□ -1.75
SIX5Q8N196 RNU6-131P-201ENST00000391144 107 ntBASIC4.15□□□□□ -1.75
SIX5Q8N196 SNORD66.1-201ENST00000391230 76 ntBASIC4.15□□□□□ -1.75
SIX5Q8N196 NDUFB4P4-201ENST00000404822 243 ntBASIC4.15□□□□□ -1.75
SIX5Q8N196 AL135790.2-201ENST00000437701 267 ntBASIC4.15□□□□□ -1.75
SIX5Q8N196 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
SIX5Q8N196 KRTAP13-6P-201ENST00000508999 371 ntBASIC4.15□□□□□ -1.75
SIX5Q8N196 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC4.15□□□□□ -1.75
SIX5Q8N196 SNORA31.1-201ENST00000515993 133 ntBASIC4.15□□□□□ -1.75
SIX5Q8N196 SNORA31.5-201ENST00000516190 133 ntBASIC4.15□□□□□ -1.75
SIX5Q8N196 IGLV3-26-201ENST00000520756 302 ntBASIC4.15□□□□□ -1.75
SIX5Q8N196 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.15□□□□□ -1.75
SIX5Q8N196 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.15□□□□□ -1.75
SIX5Q8N196 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.15□□□□□ -1.75
SIX5Q8N196 MIR4298-201ENST00000584380 73 ntBASIC4.15□□□□□ -1.75
SIX5Q8N196 MIR5684-201ENST00000585074 65 ntBASIC4.15□□□□□ -1.75
SIX5Q8N196 AC008739.2-201ENST00000597006 317 ntBASIC4.15□□□□□ -1.75
SIX5Q8N196 AC110741.2-201ENST00000605278 268 ntBASIC4.15□□□□□ -1.75
SIX5Q8N196 U6.115-201ENST00000636045 103 ntBASIC4.15□□□□□ -1.75
SIX5Q8N196 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.15□□□□□ -1.75
SIX5Q8N196 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SIX5Q8N196 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SIX5Q8N196 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
SIX5Q8N196 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
SIX5Q8N196 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SIX5Q8N196 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
SIX5Q8N196 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SIX5Q8N196 Y_RNA.111-201ENST00000363248 100 ntBASIC4.14□□□□□ -1.75
SIX5Q8N196 RNU6-1048P-201ENST00000364054 107 ntBASIC4.14□□□□□ -1.75
SIX5Q8N196 Y_RNA.368-201ENST00000365547 113 ntBASIC4.14□□□□□ -1.75
SIX5Q8N196 MIR183-201ENST00000384958 110 ntBASIC4.14□□□□□ -1.75
SIX5Q8N196 RNU6-578P-201ENST00000390980 103 ntBASIC4.14□□□□□ -1.75
SIX5Q8N196 AL355497.1-201ENST00000406262 551 ntBASIC4.14□□□□□ -1.75
SIX5Q8N196 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.14□□□□□ -1.75
SIX5Q8N196 SRI-210ENST00000490437 570 ntTSL 2 BASIC4.14□□□□□ -1.75
SIX5Q8N196 PPBPP1-201ENST00000510807 373 ntBASIC4.14□□□□□ -1.75
SIX5Q8N196 AC107027.2-201ENST00000512197 115 ntBASIC4.14□□□□□ -1.75
SIX5Q8N196 RNU5F-4P-201ENST00000516581 114 ntBASIC4.14□□□□□ -1.75
SIX5Q8N196 MIR4431-201ENST00000579990 94 ntBASIC4.14□□□□□ -1.75
SIX5Q8N196 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.14□□□□□ -1.75
SIX5Q8N196 MIR4727-201ENST00000622232 55 ntBASIC4.14□□□□□ -1.75
SIX5Q8N196 U6.105-201ENST00000637379 88 ntBASIC4.14□□□□□ -1.75
SIX5Q8N196 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.14□□□□□ -1.75
SIX5Q8N196 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SIX5Q8N196 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
SIX5Q8N196 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.14□□□□□ -1.75
SIX5Q8N196 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SIX5Q8N196 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SIX5Q8N196 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SIX5Q8N196 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.13□□□□□ -1.75
SIX5Q8N196 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.13□□□□□ -1.75
SIX5Q8N196 RNA5SP295-201ENST00000362655 121 ntBASIC4.13□□□□□ -1.75
SIX5Q8N196 RNU6-1205P-201ENST00000363625 106 ntBASIC4.13□□□□□ -1.75
SIX5Q8N196 RNU4-10P-201ENST00000364383 140 ntBASIC4.13□□□□□ -1.75
SIX5Q8N196 RNU1-44P-201ENST00000384453 163 ntBASIC4.13□□□□□ -1.75
SIX5Q8N196 RNU6-959P-201ENST00000384671 107 ntBASIC4.13□□□□□ -1.75
SIX5Q8N196 MIR626-201ENST00000385032 94 ntBASIC4.13□□□□□ -1.75
SIX5Q8N196 MIR29B2-201ENST00000385055 81 ntBASIC4.13□□□□□ -1.75
SIX5Q8N196 AC097463.2-201ENST00000421074 142 ntBASIC4.13□□□□□ -1.75
SIX5Q8N196 Z98742.2-201ENST00000431564 187 ntBASIC4.13□□□□□ -1.75
SIX5Q8N196 U3.44-201ENST00000458938 192 ntBASIC4.13□□□□□ -1.75
SIX5Q8N196 RNU6-313P-201ENST00000516317 112 ntBASIC4.13□□□□□ -1.75
SIX5Q8N196 AC087499.8-201ENST00000578406 226 ntBASIC4.13□□□□□ -1.75
SIX5Q8N196 MIR5195-201ENST00000583555 115 ntBASIC4.13□□□□□ -1.75
SIX5Q8N196 U3.45-201ENST00000607547 219 ntBASIC4.13□□□□□ -1.75
SIX5Q8N196 AC090517.3-201ENST00000625170 141 ntBASIC4.13□□□□□ -1.75
SIX5Q8N196 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
SIX5Q8N196 MAPK10-372ENST00000641954 3413 ntBASIC4.13□□□□□ -1.75
SIX5Q8N196 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
SIX5Q8N196 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SIX5Q8N196 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SIX5Q8N196 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SIX5Q8N196 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
SIX5Q8N196 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
SIX5Q8N196 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
SIX5Q8N196 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SIX5Q8N196 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
SIX5Q8N196 SNORD50B-201ENST00000364995 70 ntBASIC4.12□□□□□ -1.75
SIX5Q8N196 SNORA67.2-201ENST00000384300 149 ntBASIC4.12□□□□□ -1.75
SIX5Q8N196 RNU6-22P-201ENST00000384355 107 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms