Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 RNU6-1088P-201ENST00000516850 104 ntBASIC2.1□□□□□ -2.07
CCDC60Q8IWA6 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.1□□□□□ -2.07
CCDC60Q8IWA6 MIR3126-201ENST00000577443 74 ntBASIC2.1□□□□□ -2.07
CCDC60Q8IWA6 AC011712.1-201ENST00000588959 234 ntBASIC2.1□□□□□ -2.07
CCDC60Q8IWA6 SNORA43.4-201ENST00000629559 138 ntBASIC2.1□□□□□ -2.07
CCDC60Q8IWA6 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CCDC60Q8IWA6 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.09□□□□□ -2.07
CCDC60Q8IWA6 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.09□□□□□ -2.07
CCDC60Q8IWA6 RNU4-15P-201ENST00000362613 141 ntBASIC2.09□□□□□ -2.07
CCDC60Q8IWA6 Y_RNA.160-201ENST00000363677 92 ntBASIC2.09□□□□□ -2.07
CCDC60Q8IWA6 SNORA16B-201ENST00000364674 135 ntBASIC2.09□□□□□ -2.07
CCDC60Q8IWA6 RNU6-306P-201ENST00000384617 107 ntBASIC2.09□□□□□ -2.07
CCDC60Q8IWA6 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
CCDC60Q8IWA6 SNORA12-201ENST00000391162 147 ntBASIC2.09□□□□□ -2.07
CCDC60Q8IWA6 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.09□□□□□ -2.07
CCDC60Q8IWA6 RNU2-32P-201ENST00000411193 191 ntBASIC2.09□□□□□ -2.07
CCDC60Q8IWA6 AL645568.3-201ENST00000433683 316 ntBASIC2.09□□□□□ -2.07
CCDC60Q8IWA6 PCMTD1P1-201ENST00000455560 355 ntBASIC2.09□□□□□ -2.07
CCDC60Q8IWA6 PPP1R2P5-201ENST00000457256 603 ntBASIC2.09□□□□□ -2.07
CCDC60Q8IWA6 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.09□□□□□ -2.07
CCDC60Q8IWA6 RPL23AP63-201ENST00000498752 471 ntBASIC2.09□□□□□ -2.07
CCDC60Q8IWA6 SNORA4.4-201ENST00000515921 135 ntBASIC2.09□□□□□ -2.07
CCDC60Q8IWA6 RNU1-40P-201ENST00000516816 164 ntBASIC2.09□□□□□ -2.07
CCDC60Q8IWA6 RNU1-97P-201ENST00000516872 164 ntBASIC2.09□□□□□ -2.07
CCDC60Q8IWA6 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.09□□□□□ -2.07
CCDC60Q8IWA6 AC018889.1-201ENST00000605372 397 ntBASIC2.09□□□□□ -2.07
CCDC60Q8IWA6 MIR6840-201ENST00000611937 71 ntBASIC2.09□□□□□ -2.07
CCDC60Q8IWA6 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
CCDC60Q8IWA6 SNORA25B-201ENST00000365507 128 ntBASIC2.08□□□□□ -2.08
CCDC60Q8IWA6 RNU6-142P-201ENST00000384019 107 ntBASIC2.08□□□□□ -2.08
CCDC60Q8IWA6 MIR517A-201ENST00000385001 87 ntBASIC2.08□□□□□ -2.08
CCDC60Q8IWA6 IFNA20P-201ENST00000436840 528 ntBASIC2.08□□□□□ -2.08
CCDC60Q8IWA6 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.08□□□□□ -2.08
CCDC60Q8IWA6 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.08□□□□□ -2.08
CCDC60Q8IWA6 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.08□□□□□ -2.08
CCDC60Q8IWA6 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.08□□□□□ -2.08
CCDC60Q8IWA6 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.08□□□□□ -2.08
CCDC60Q8IWA6 MTCO2P30-201ENST00000503662 364 ntBASIC2.08□□□□□ -2.08
CCDC60Q8IWA6 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.08□□□□□ -2.08
CCDC60Q8IWA6 RNU6-237P-201ENST00000515985 71 ntBASIC2.08□□□□□ -2.08
CCDC60Q8IWA6 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.08□□□□□ -2.08
CCDC60Q8IWA6 CYCSP26-201ENST00000534107 320 ntBASIC2.08□□□□□ -2.08
CCDC60Q8IWA6 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.08□□□□□ -2.08
CCDC60Q8IWA6 CPDP1-201ENST00000579660 283 ntBASIC2.08□□□□□ -2.08
CCDC60Q8IWA6 MIR4742-201ENST00000581069 85 ntBASIC2.08□□□□□ -2.08
CCDC60Q8IWA6 MIR4448-201ENST00000584360 86 ntBASIC2.08□□□□□ -2.08
CCDC60Q8IWA6 AC007229.1-201ENST00000590455 412 ntBASIC2.08□□□□□ -2.08
CCDC60Q8IWA6 AL078605.1-201ENST00000603529 500 ntBASIC2.08□□□□□ -2.08
CCDC60Q8IWA6 Z98751.3-201ENST00000604447 521 ntBASIC2.08□□□□□ -2.08
CCDC60Q8IWA6 AL133215.3-201ENST00000609801 448 ntBASIC2.08□□□□□ -2.08
CCDC60Q8IWA6 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
CCDC60Q8IWA6 CBX3P1-201ENST00000325243 554 ntBASIC2.07□□□□□ -2.08
CCDC60Q8IWA6 RNA5SP99-201ENST00000364020 114 ntBASIC2.07□□□□□ -2.08
CCDC60Q8IWA6 RNU6-743P-201ENST00000364151 106 ntBASIC2.07□□□□□ -2.08
CCDC60Q8IWA6 RNU6-546P-201ENST00000383991 107 ntBASIC2.07□□□□□ -2.08
CCDC60Q8IWA6 SNORA46.1-201ENST00000391069 153 ntBASIC2.07□□□□□ -2.08
CCDC60Q8IWA6 RNU6-510P-201ENST00000391239 108 ntBASIC2.07□□□□□ -2.08
CCDC60Q8IWA6 IPO7P1-201ENST00000442031 636 ntBASIC2.07□□□□□ -2.08
CCDC60Q8IWA6 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.07□□□□□ -2.08
CCDC60Q8IWA6 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.07□□□□□ -2.08
CCDC60Q8IWA6 RPL31P58-201ENST00000469001 379 ntBASIC2.07□□□□□ -2.08
CCDC60Q8IWA6 AC018868.1-201ENST00000491307 315 ntBASIC2.07□□□□□ -2.08
CCDC60Q8IWA6 AC021146.2-201ENST00000504736 556 ntBASIC2.07□□□□□ -2.08
CCDC60Q8IWA6 PTP4A1P4-201ENST00000512479 322 ntBASIC2.07□□□□□ -2.08
CCDC60Q8IWA6 RNU6-548P-201ENST00000517083 115 ntBASIC2.07□□□□□ -2.08
CCDC60Q8IWA6 RNU6-667P-201ENST00000517186 102 ntBASIC2.07□□□□□ -2.08
CCDC60Q8IWA6 RNA5SP454-201ENST00000517231 127 ntBASIC2.07□□□□□ -2.08
CCDC60Q8IWA6 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.07□□□□□ -2.08
CCDC60Q8IWA6 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.07□□□□□ -2.08
CCDC60Q8IWA6 AP005639.2-201ENST00000527592 928 ntBASIC2.07□□□□□ -2.08
CCDC60Q8IWA6 AC021231.3-201ENST00000558497 370 ntBASIC2.07□□□□□ -2.08
CCDC60Q8IWA6 MIR3923-201ENST00000579521 83 ntBASIC2.07□□□□□ -2.08
CCDC60Q8IWA6 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.07□□□□□ -2.08
CCDC60Q8IWA6 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.07□□□□□ -2.08
CCDC60Q8IWA6 AC019193.3-201ENST00000609144 554 ntBASIC2.07□□□□□ -2.08
CCDC60Q8IWA6 MIR8076-201ENST00000611401 83 ntBASIC2.07□□□□□ -2.08
CCDC60Q8IWA6 AL450472.1-202ENST00000637286 180 ntBASIC2.07□□□□□ -2.08
CCDC60Q8IWA6 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.07□□□□□ -2.08
CCDC60Q8IWA6 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CCDC60Q8IWA6 Y_RNA.72-201ENST00000362894 103 ntBASIC2.06□□□□□ -2.08
CCDC60Q8IWA6 SNORA26.3-201ENST00000391119 136 ntBASIC2.06□□□□□ -2.08
CCDC60Q8IWA6 U3.40-201ENST00000408706 208 ntBASIC2.06□□□□□ -2.08
CCDC60Q8IWA6 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.06□□□□□ -2.08
CCDC60Q8IWA6 AL353572.1-201ENST00000442490 417 ntBASIC2.06□□□□□ -2.08
CCDC60Q8IWA6 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CCDC60Q8IWA6 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.06□□□□□ -2.08
CCDC60Q8IWA6 snoU13.6-201ENST00000458785 104 ntBASIC2.06□□□□□ -2.08
CCDC60Q8IWA6 RNU6-329P-201ENST00000459618 107 ntBASIC2.06□□□□□ -2.08
CCDC60Q8IWA6 Y_RNA.682-201ENST00000516457 100 ntBASIC2.06□□□□□ -2.08
CCDC60Q8IWA6 RNU6-566P-201ENST00000516790 107 ntBASIC2.06□□□□□ -2.08
CCDC60Q8IWA6 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CCDC60Q8IWA6 MRPS36P4-201ENST00000534436 298 ntBASIC2.06□□□□□ -2.08
CCDC60Q8IWA6 MIR4790-201ENST00000577799 79 ntBASIC2.06□□□□□ -2.08
CCDC60Q8IWA6 POLR3GP2-201ENST00000588366 668 ntBASIC2.06□□□□□ -2.08
CCDC60Q8IWA6 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.06□□□□□ -2.08
CCDC60Q8IWA6 AC022202.1-201ENST00000613515 211 ntBASIC2.06□□□□□ -2.08
CCDC60Q8IWA6 AL133216.2-202ENST00000634512 349 ntBASIC2.06□□□□□ -2.08
CCDC60Q8IWA6 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.06□□□□□ -2.08
CCDC60Q8IWA6 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
CCDC60Q8IWA6 Y_RNA.301-201ENST00000364990 103 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 161.2 ms