Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
NUDCD3Q8IVD9 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
NUDCD3Q8IVD9 RNU6-661P-201ENST00000362409 107 ntBASIC1.41□□□□□ -2.18
NUDCD3Q8IVD9 RNU6-112P-201ENST00000363599 104 ntBASIC1.41□□□□□ -2.18
NUDCD3Q8IVD9 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.41□□□□□ -2.18
NUDCD3Q8IVD9 SNORD37.1-201ENST00000390968 65 ntBASIC1.41□□□□□ -2.18
NUDCD3Q8IVD9 Y_RNA.582-201ENST00000391023 95 ntBASIC1.41□□□□□ -2.18
NUDCD3Q8IVD9 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
NUDCD3Q8IVD9 DEFB108C-201ENST00000400154 252 ntBASIC1.41□□□□□ -2.18
NUDCD3Q8IVD9 AL663109.1-201ENST00000411498 844 ntBASIC1.41□□□□□ -2.18
NUDCD3Q8IVD9 AL513185.2-201ENST00000425543 193 ntBASIC1.41□□□□□ -2.18
NUDCD3Q8IVD9 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.41□□□□□ -2.18
NUDCD3Q8IVD9 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.41□□□□□ -2.18
NUDCD3Q8IVD9 SNRPGP13-201ENST00000442212 177 ntBASIC1.41□□□□□ -2.18
NUDCD3Q8IVD9 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.41□□□□□ -2.18
NUDCD3Q8IVD9 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.41□□□□□ -2.18
NUDCD3Q8IVD9 AC016925.1-201ENST00000458303 298 ntBASIC1.41□□□□□ -2.18
NUDCD3Q8IVD9 snoU13.6-201ENST00000458785 104 ntBASIC1.41□□□□□ -2.18
NUDCD3Q8IVD9 RNU6-1037P-201ENST00000459571 107 ntBASIC1.41□□□□□ -2.18
NUDCD3Q8IVD9 RNU6-323P-201ENST00000521915 107 ntBASIC1.41□□□□□ -2.18
NUDCD3Q8IVD9 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.41□□□□□ -2.18
NUDCD3Q8IVD9 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
NUDCD3Q8IVD9 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.41□□□□□ -2.18
NUDCD3Q8IVD9 AC092747.3-201ENST00000603769 301 ntBASIC1.41□□□□□ -2.18
NUDCD3Q8IVD9 AL161722.3-201ENST00000605789 2983 ntBASIC1.41□□□□□ -2.18
NUDCD3Q8IVD9 AC064807.4-201ENST00000607201 407 ntBASIC1.41□□□□□ -2.18
NUDCD3Q8IVD9 AC064836.2-201ENST00000609491 462 ntBASIC1.41□□□□□ -2.18
NUDCD3Q8IVD9 AC103705.1-201ENST00000619013 241 ntBASIC1.41□□□□□ -2.18
NUDCD3Q8IVD9 AL136221.1-201ENST00000621449 509 ntBASIC1.41□□□□□ -2.18
NUDCD3Q8IVD9 AC139792.3-201ENST00000623525 224 ntBASIC1.41□□□□□ -2.18
NUDCD3Q8IVD9 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.41□□□□□ -2.18
NUDCD3Q8IVD9 U8.1-201ENST00000362843 134 ntBASIC1.4□□□□□ -2.19
NUDCD3Q8IVD9 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
NUDCD3Q8IVD9 MTATP6P17-201ENST00000431030 672 ntBASIC1.4□□□□□ -2.19
NUDCD3Q8IVD9 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.4□□□□□ -2.19
NUDCD3Q8IVD9 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
NUDCD3Q8IVD9 RPS29P27-201ENST00000463711 170 ntBASIC1.4□□□□□ -2.19
NUDCD3Q8IVD9 AC010531.2-201ENST00000465012 153 ntBASIC1.4□□□□□ -2.19
NUDCD3Q8IVD9 SUMO2P18-201ENST00000518873 252 ntBASIC1.4□□□□□ -2.19
NUDCD3Q8IVD9 AC104576.1-201ENST00000524225 88 ntBASIC1.4□□□□□ -2.19
NUDCD3Q8IVD9 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.4□□□□□ -2.19
NUDCD3Q8IVD9 AC025423.5-201ENST00000550230 219 ntBASIC1.4□□□□□ -2.19
NUDCD3Q8IVD9 SNORD53B-201ENST00000577887 78 ntBASIC1.4□□□□□ -2.19
NUDCD3Q8IVD9 AC025811.1-201ENST00000604312 472 ntBASIC1.4□□□□□ -2.19
NUDCD3Q8IVD9 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.4□□□□□ -2.19
NUDCD3Q8IVD9 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
NUDCD3Q8IVD9 RNU6-227P-201ENST00000362865 103 ntBASIC1.39□□□□□ -2.19
NUDCD3Q8IVD9 RNA5SP190-201ENST00000365222 118 ntBASIC1.39□□□□□ -2.19
NUDCD3Q8IVD9 Y_RNA.378-201ENST00000365652 113 ntBASIC1.39□□□□□ -2.19
NUDCD3Q8IVD9 SNORA18.2-201ENST00000383865 132 ntBASIC1.39□□□□□ -2.19
NUDCD3Q8IVD9 Y_RNA.409-201ENST00000383990 98 ntBASIC1.39□□□□□ -2.19
NUDCD3Q8IVD9 RNU6-38P-201ENST00000384085 107 ntBASIC1.39□□□□□ -2.19
NUDCD3Q8IVD9 RNU6-1026P-201ENST00000384465 108 ntBASIC1.39□□□□□ -2.19
NUDCD3Q8IVD9 RNU6-296P-201ENST00000384608 107 ntBASIC1.39□□□□□ -2.19
NUDCD3Q8IVD9 SNORA67.6-201ENST00000391093 99 ntBASIC1.39□□□□□ -2.19
NUDCD3Q8IVD9 RNU6-1093P-201ENST00000391194 107 ntBASIC1.39□□□□□ -2.19
NUDCD3Q8IVD9 RPL21P111-201ENST00000418453 477 ntBASIC1.39□□□□□ -2.19
NUDCD3Q8IVD9 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.39□□□□□ -2.19
NUDCD3Q8IVD9 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.39□□□□□ -2.19
NUDCD3Q8IVD9 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
NUDCD3Q8IVD9 MTND3P9-201ENST00000429526 346 ntBASIC1.39□□□□□ -2.19
NUDCD3Q8IVD9 MTCO1P44-201ENST00000441935 243 ntBASIC1.39□□□□□ -2.19
NUDCD3Q8IVD9 RPL9P9-202ENST00000466501 579 ntBASIC1.39□□□□□ -2.19
NUDCD3Q8IVD9 RPS23P5-201ENST00000495419 428 ntBASIC1.39□□□□□ -2.19
NUDCD3Q8IVD9 AC025465.4-201ENST00000513422 638 ntBASIC1.39□□□□□ -2.19
NUDCD3Q8IVD9 RNA5SP401-201ENST00000515920 127 ntBASIC1.39□□□□□ -2.19
NUDCD3Q8IVD9 RNU6-1069P-201ENST00000516612 133 ntBASIC1.39□□□□□ -2.19
NUDCD3Q8IVD9 SNORA31.24-201ENST00000517232 57 ntBASIC1.39□□□□□ -2.19
NUDCD3Q8IVD9 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.39□□□□□ -2.19
NUDCD3Q8IVD9 DEFB131C-201ENST00000528817 165 ntBASIC1.39□□□□□ -2.19
NUDCD3Q8IVD9 SNORA59B-202ENST00000578183 701 ntBASIC1.39□□□□□ -2.19
NUDCD3Q8IVD9 RN7SKP299-201ENST00000606679 301 ntBASIC1.39□□□□□ -2.19
NUDCD3Q8IVD9 AP001330.5-201ENST00000607176 411 ntBASIC1.39□□□□□ -2.19
NUDCD3Q8IVD9 AC017083.3-201ENST00000609955 700 ntBASIC1.39□□□□□ -2.19
NUDCD3Q8IVD9 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
NUDCD3Q8IVD9 AL121757.2-201ENST00000611223 313 ntBASIC1.39□□□□□ -2.19
NUDCD3Q8IVD9 AC083806.3-201ENST00000614016 455 ntBASIC1.39□□□□□ -2.19
NUDCD3Q8IVD9 MIR8074-201ENST00000615081 81 ntBASIC1.39□□□□□ -2.19
NUDCD3Q8IVD9 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.39□□□□□ -2.19
NUDCD3Q8IVD9 AC068205.3-201ENST00000636385 468 ntBASIC1.39□□□□□ -2.19
NUDCD3Q8IVD9 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.38□□□□□ -2.19
NUDCD3Q8IVD9 AL159152.1-201ENST00000635019 2587 ntBASIC1.38□□□□□ -2.19
NUDCD3Q8IVD9 RNU6-82P-201ENST00000363970 107 ntBASIC1.38□□□□□ -2.19
NUDCD3Q8IVD9 RNU4-66P-201ENST00000365199 138 ntBASIC1.38□□□□□ -2.19
NUDCD3Q8IVD9 RNU4-20P-201ENST00000365601 151 ntBASIC1.38□□□□□ -2.19
NUDCD3Q8IVD9 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.38□□□□□ -2.19
NUDCD3Q8IVD9 CYCSP49-201ENST00000420810 319 ntBASIC1.38□□□□□ -2.19
NUDCD3Q8IVD9 USP9YP28-201ENST00000435142 589 ntBASIC1.38□□□□□ -2.19
NUDCD3Q8IVD9 AC099677.2-201ENST00000436385 175 ntBASIC1.38□□□□□ -2.19
NUDCD3Q8IVD9 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.38□□□□□ -2.19
NUDCD3Q8IVD9 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.38□□□□□ -2.19
NUDCD3Q8IVD9 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.38□□□□□ -2.19
NUDCD3Q8IVD9 AC087477.1-201ENST00000465747 340 ntBASIC1.38□□□□□ -2.19
NUDCD3Q8IVD9 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.38□□□□□ -2.19
NUDCD3Q8IVD9 AC087854.1-201ENST00000519706 414 ntBASIC1.38□□□□□ -2.19
NUDCD3Q8IVD9 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.38□□□□□ -2.19
NUDCD3Q8IVD9 AC104383.1-201ENST00000530297 370 ntBASIC1.38□□□□□ -2.19
NUDCD3Q8IVD9 AP003034.1-201ENST00000534621 422 ntBASIC1.38□□□□□ -2.19
NUDCD3Q8IVD9 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.38□□□□□ -2.19
NUDCD3Q8IVD9 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 170.9 ms