Protein–RNA interactions for Protein: Q7RTR2

NLRC3, NLR family CARD domain-containing protein 3, humanhuman

Predictions only

Length 1,065 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3Q7RTR2 RAC1P5-201ENST00000512182 576 ntBASIC3.42□□□□□ -1.86
NLRC3Q7RTR2 RNU6-255P-201ENST00000516957 105 ntBASIC3.42□□□□□ -1.86
NLRC3Q7RTR2 SCARNA11.3-201ENST00000517276 130 ntBASIC3.42□□□□□ -1.86
NLRC3Q7RTR2 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.42□□□□□ -1.86
NLRC3Q7RTR2 MIR5692C2-201ENST00000577959 77 ntBASIC3.42□□□□□ -1.86
NLRC3Q7RTR2 MIR5684-201ENST00000585074 65 ntBASIC3.42□□□□□ -1.86
NLRC3Q7RTR2 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.42□□□□□ -1.86
NLRC3Q7RTR2 AC099778.2-201ENST00000610904 211 ntBASIC3.42□□□□□ -1.86
NLRC3Q7RTR2 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.42□□□□□ -1.86
NLRC3Q7RTR2 U6.106-201ENST00000636360 105 ntBASIC3.42□□□□□ -1.86
NLRC3Q7RTR2 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
NLRC3Q7RTR2 AC091564.4-201ENST00000533934 2194 ntBASIC3.42□□□□□ -1.86
NLRC3Q7RTR2 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
NLRC3Q7RTR2 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.42□□□□□ -1.86
NLRC3Q7RTR2 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NLRC3Q7RTR2 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NLRC3Q7RTR2 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.41□□□□□ -1.86
NLRC3Q7RTR2 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NLRC3Q7RTR2 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.41□□□□□ -1.86
NLRC3Q7RTR2 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NLRC3Q7RTR2 RNA5SP130-201ENST00000364431 114 ntBASIC3.41□□□□□ -1.86
NLRC3Q7RTR2 Y_RNA.243-201ENST00000364481 109 ntBASIC3.41□□□□□ -1.86
NLRC3Q7RTR2 Y_RNA.435-201ENST00000384095 112 ntBASIC3.41□□□□□ -1.86
NLRC3Q7RTR2 RNU1-13P-201ENST00000384499 162 ntBASIC3.41□□□□□ -1.86
NLRC3Q7RTR2 MIR1251-201ENST00000408552 70 ntBASIC3.41□□□□□ -1.86
NLRC3Q7RTR2 AL356095.1-201ENST00000417217 199 ntBASIC3.41□□□□□ -1.86
NLRC3Q7RTR2 AC002075.2-201ENST00000425207 252 ntBASIC3.41□□□□□ -1.86
NLRC3Q7RTR2 RNU6-1098P-201ENST00000516772 96 ntBASIC3.41□□□□□ -1.86
NLRC3Q7RTR2 MIR3160-1-201ENST00000577972 85 ntBASIC3.41□□□□□ -1.86
NLRC3Q7RTR2 MIR4308-201ENST00000580634 81 ntBASIC3.41□□□□□ -1.86
NLRC3Q7RTR2 MIR4286-201ENST00000580651 93 ntBASIC3.41□□□□□ -1.86
NLRC3Q7RTR2 RN7SL600P-201ENST00000581811 299 ntBASIC3.41□□□□□ -1.86
NLRC3Q7RTR2 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NLRC3Q7RTR2 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.41□□□□□ -1.86
NLRC3Q7RTR2 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
NLRC3Q7RTR2 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NLRC3Q7RTR2 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NLRC3Q7RTR2 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.86
NLRC3Q7RTR2 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
NLRC3Q7RTR2 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.4□□□□□ -1.86
NLRC3Q7RTR2 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
NLRC3Q7RTR2 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
NLRC3Q7RTR2 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
NLRC3Q7RTR2 RNU6-653P-201ENST00000363074 106 ntBASIC3.4□□□□□ -1.87
NLRC3Q7RTR2 Y_RNA.240-201ENST00000364469 95 ntBASIC3.4□□□□□ -1.87
NLRC3Q7RTR2 CD24P4-201ENST00000382840 243 ntBASIC3.4□□□□□ -1.87
NLRC3Q7RTR2 MIR548B-201ENST00000385247 97 ntBASIC3.4□□□□□ -1.87
NLRC3Q7RTR2 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
NLRC3Q7RTR2 SNORA57.1-201ENST00000391227 145 ntBASIC3.4□□□□□ -1.87
NLRC3Q7RTR2 MIR1193-201ENST00000408109 78 ntBASIC3.4□□□□□ -1.87
NLRC3Q7RTR2 RN7SKP51-201ENST00000410781 304 ntBASIC3.4□□□□□ -1.87
NLRC3Q7RTR2 AL691449.1-201ENST00000426570 421 ntBASIC3.4□□□□□ -1.87
NLRC3Q7RTR2 TRIAP1P1-201ENST00000427062 225 ntBASIC3.4□□□□□ -1.87
NLRC3Q7RTR2 AL392103.1-201ENST00000447000 198 ntBASIC3.4□□□□□ -1.87
NLRC3Q7RTR2 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.4□□□□□ -1.87
NLRC3Q7RTR2 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.4□□□□□ -1.87
NLRC3Q7RTR2 VN1R85P-201ENST00000601587 426 ntBASIC3.4□□□□□ -1.87
NLRC3Q7RTR2 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.4□□□□□ -1.87
NLRC3Q7RTR2 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.4□□□□□ -1.87
NLRC3Q7RTR2 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
NLRC3Q7RTR2 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.4□□□□□ -1.87
NLRC3Q7RTR2 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.4□□□□□ -1.87
NLRC3Q7RTR2 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
NLRC3Q7RTR2 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
NLRC3Q7RTR2 AP003122.5-201ENST00000527668 3766 ntBASIC3.39□□□□□ -1.87
NLRC3Q7RTR2 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NLRC3Q7RTR2 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.39□□□□□ -1.87
NLRC3Q7RTR2 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NLRC3Q7RTR2 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
NLRC3Q7RTR2 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.39□□□□□ -1.87
NLRC3Q7RTR2 MIR184-201ENST00000384962 84 ntBASIC3.39□□□□□ -1.87
NLRC3Q7RTR2 AL357139.1-201ENST00000407792 426 ntBASIC3.39□□□□□ -1.87
NLRC3Q7RTR2 MIR1294-201ENST00000408503 142 ntBASIC3.39□□□□□ -1.87
NLRC3Q7RTR2 RNU6-710P-201ENST00000410424 105 ntBASIC3.39□□□□□ -1.87
NLRC3Q7RTR2 AL139281.1-201ENST00000422120 335 ntBASIC3.39□□□□□ -1.87
NLRC3Q7RTR2 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.39□□□□□ -1.87
NLRC3Q7RTR2 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
NLRC3Q7RTR2 Y_RNA.637-201ENST00000459424 114 ntBASIC3.39□□□□□ -1.87
NLRC3Q7RTR2 AC006483.1-201ENST00000487308 313 ntBASIC3.39□□□□□ -1.87
NLRC3Q7RTR2 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.39□□□□□ -1.87
NLRC3Q7RTR2 HMGB3P3-201ENST00000510526 400 ntBASIC3.39□□□□□ -1.87
NLRC3Q7RTR2 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.39□□□□□ -1.87
NLRC3Q7RTR2 RNU6-1278P-201ENST00000516130 107 ntBASIC3.39□□□□□ -1.87
NLRC3Q7RTR2 RN7SKP21-201ENST00000516503 220 ntBASIC3.39□□□□□ -1.87
NLRC3Q7RTR2 Y_RNA.703-201ENST00000516846 111 ntBASIC3.39□□□□□ -1.87
NLRC3Q7RTR2 RNU6-789P-201ENST00000517105 102 ntBASIC3.39□□□□□ -1.87
NLRC3Q7RTR2 AC093331.1-201ENST00000521474 169 ntBASIC3.39□□□□□ -1.87
NLRC3Q7RTR2 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.39□□□□□ -1.87
NLRC3Q7RTR2 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.39□□□□□ -1.87
NLRC3Q7RTR2 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.39□□□□□ -1.87
NLRC3Q7RTR2 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.39□□□□□ -1.87
NLRC3Q7RTR2 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.39□□□□□ -1.87
NLRC3Q7RTR2 AL606490.9-201ENST00000603331 271 ntBASIC3.39□□□□□ -1.87
NLRC3Q7RTR2 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.39□□□□□ -1.87
NLRC3Q7RTR2 MIR6867-201ENST00000610636 67 ntBASIC3.39□□□□□ -1.87
NLRC3Q7RTR2 RNVU1-4-201ENST00000612985 164 ntBASIC3.39□□□□□ -1.87
NLRC3Q7RTR2 MIR7151-201ENST00000617477 60 ntBASIC3.39□□□□□ -1.87
NLRC3Q7RTR2 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NLRC3Q7RTR2 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.38□□□□□ -1.87
NLRC3Q7RTR2 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 167 ms