Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.85□□□□□ -1.95
PPP4R4Q6NUP7 HSPE1P18-201ENST00000517602 280 ntBASIC2.85□□□□□ -1.95
PPP4R4Q6NUP7 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.85□□□□□ -1.95
PPP4R4Q6NUP7 UBL5P4-201ENST00000562584 236 ntBASIC2.85□□□□□ -1.95
PPP4R4Q6NUP7 AC009127.3-201ENST00000570531 403 ntBASIC2.85□□□□□ -1.95
PPP4R4Q6NUP7 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.85□□□□□ -1.95
PPP4R4Q6NUP7 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
PPP4R4Q6NUP7 RNU6-700P-201ENST00000391043 107 ntBASIC2.84□□□□□ -1.95
PPP4R4Q6NUP7 AL139095.1-201ENST00000404326 391 ntBASIC2.84□□□□□ -1.95
PPP4R4Q6NUP7 AL078595.1-201ENST00000404458 226 ntBASIC2.84□□□□□ -1.95
PPP4R4Q6NUP7 Z92545.1-201ENST00000411782 234 ntBASIC2.84□□□□□ -1.95
PPP4R4Q6NUP7 AL445305.1-201ENST00000432577 575 ntBASIC2.84□□□□□ -1.95
PPP4R4Q6NUP7 CHEK2P4-201ENST00000450340 246 ntBASIC2.84□□□□□ -1.95
PPP4R4Q6NUP7 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.84□□□□□ -1.95
PPP4R4Q6NUP7 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.84□□□□□ -1.95
PPP4R4Q6NUP7 HMGB3P3-201ENST00000510526 400 ntBASIC2.84□□□□□ -1.95
PPP4R4Q6NUP7 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.84□□□□□ -1.95
PPP4R4Q6NUP7 UBL5P2-201ENST00000583788 219 ntBASIC2.84□□□□□ -1.95
PPP4R4Q6NUP7 AC022202.1-201ENST00000613515 211 ntBASIC2.84□□□□□ -1.95
PPP4R4Q6NUP7 uc_338.22-201ENST00000622722 187 ntBASIC2.84□□□□□ -1.95
PPP4R4Q6NUP7 AC018692.3-201ENST00000623929 123 ntBASIC2.84□□□□□ -1.95
PPP4R4Q6NUP7 BX322639.1-202ENST00000423987 2213 ntBASIC2.84□□□□□ -1.96
PPP4R4Q6NUP7 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
PPP4R4Q6NUP7 RNU1-76P-201ENST00000362903 159 ntBASIC2.83□□□□□ -1.96
PPP4R4Q6NUP7 RNU6-1159P-201ENST00000362933 107 ntBASIC2.83□□□□□ -1.96
PPP4R4Q6NUP7 MIR128-1-201ENST00000384921 82 ntBASIC2.83□□□□□ -1.96
PPP4R4Q6NUP7 MIR10B-201ENST00000385011 110 ntBASIC2.83□□□□□ -1.96
PPP4R4Q6NUP7 MIR634-201ENST00000385208 97 ntBASIC2.83□□□□□ -1.96
PPP4R4Q6NUP7 SNORD67-201ENST00000390833 111 ntBASIC2.83□□□□□ -1.96
PPP4R4Q6NUP7 RNU6-1156P-201ENST00000410365 100 ntBASIC2.83□□□□□ -1.96
PPP4R4Q6NUP7 AL354751.2-201ENST00000415471 210 ntBASIC2.83□□□□□ -1.96
PPP4R4Q6NUP7 AC018865.2-201ENST00000423631 129 ntBASIC2.83□□□□□ -1.96
PPP4R4Q6NUP7 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PPP4R4Q6NUP7 AC092423.1-201ENST00000430165 186 ntBASIC2.83□□□□□ -1.96
PPP4R4Q6NUP7 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.83□□□□□ -1.96
PPP4R4Q6NUP7 AL137792.2-201ENST00000443484 235 ntBASIC2.83□□□□□ -1.96
PPP4R4Q6NUP7 AL035666.1-201ENST00000446195 348 ntBASIC2.83□□□□□ -1.96
PPP4R4Q6NUP7 AL137159.1-201ENST00000452808 512 ntBASIC2.83□□□□□ -1.96
PPP4R4Q6NUP7 AC107032.1-201ENST00000485945 480 ntBASIC2.83□□□□□ -1.96
PPP4R4Q6NUP7 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.83□□□□□ -1.96
PPP4R4Q6NUP7 RNA5SP341-201ENST00000516261 117 ntBASIC2.83□□□□□ -1.96
PPP4R4Q6NUP7 Y_RNA.706-201ENST00000516933 99 ntBASIC2.83□□□□□ -1.96
PPP4R4Q6NUP7 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.83□□□□□ -1.96
PPP4R4Q6NUP7 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.83□□□□□ -1.96
PPP4R4Q6NUP7 AC090517.1-201ENST00000569307 266 ntBASIC2.83□□□□□ -1.96
PPP4R4Q6NUP7 AC026271.5-201ENST00000577873 130 ntBASIC2.83□□□□□ -1.96
PPP4R4Q6NUP7 YPEL5P2-201ENST00000605553 359 ntBASIC2.83□□□□□ -1.96
PPP4R4Q6NUP7 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.83□□□□□ -1.96
PPP4R4Q6NUP7 AC138305.3-201ENST00000624988 240 ntBASIC2.83□□□□□ -1.96
PPP4R4Q6NUP7 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.83□□□□□ -1.96
PPP4R4Q6NUP7 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.83□□□□□ -1.96
PPP4R4Q6NUP7 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.83□□□□□ -1.96
PPP4R4Q6NUP7 ZNF271P-202ENST00000465539 1970 ntBASIC2.82□□□□□ -1.96
PPP4R4Q6NUP7 MIR422A-201ENST00000362286 90 ntBASIC2.82□□□□□ -1.96
PPP4R4Q6NUP7 Y_RNA.11-201ENST00000362375 109 ntBASIC2.82□□□□□ -1.96
PPP4R4Q6NUP7 Y_RNA.252-201ENST00000364556 101 ntBASIC2.82□□□□□ -1.96
PPP4R4Q6NUP7 RNU6-234P-201ENST00000365229 104 ntBASIC2.82□□□□□ -1.96
PPP4R4Q6NUP7 SNORA18.2-201ENST00000383865 132 ntBASIC2.82□□□□□ -1.96
PPP4R4Q6NUP7 RNU6-474P-201ENST00000384243 107 ntBASIC2.82□□□□□ -1.96
PPP4R4Q6NUP7 SNORD15B-201ENST00000384714 146 ntBASIC2.82□□□□□ -1.96
PPP4R4Q6NUP7 MIR524-201ENST00000385242 87 ntBASIC2.82□□□□□ -1.96
PPP4R4Q6NUP7 RNU6-159P-201ENST00000391080 106 ntBASIC2.82□□□□□ -1.96
PPP4R4Q6NUP7 RNU1-139P-201ENST00000391307 165 ntBASIC2.82□□□□□ -1.96
PPP4R4Q6NUP7 RNU4-47P-201ENST00000410876 114 ntBASIC2.82□□□□□ -1.96
PPP4R4Q6NUP7 SRIP3-201ENST00000413200 219 ntBASIC2.82□□□□□ -1.96
PPP4R4Q6NUP7 PRELID3BP1-201ENST00000457142 540 ntBASIC2.82□□□□□ -1.96
PPP4R4Q6NUP7 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.82□□□□□ -1.96
PPP4R4Q6NUP7 ATP5EP1-201ENST00000510257 156 ntBASIC2.82□□□□□ -1.96
PPP4R4Q6NUP7 RNU6-1170P-201ENST00000515974 106 ntBASIC2.82□□□□□ -1.96
PPP4R4Q6NUP7 RNA5SP367-201ENST00000516557 118 ntBASIC2.82□□□□□ -1.96
PPP4R4Q6NUP7 RNU6-264P-201ENST00000517134 104 ntBASIC2.82□□□□□ -1.96
PPP4R4Q6NUP7 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.82□□□□□ -1.96
PPP4R4Q6NUP7 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
PPP4R4Q6NUP7 7SK.7-201ENST00000603504 247 ntBASIC2.82□□□□□ -1.96
PPP4R4Q6NUP7 CYP2C61P-201ENST00000604072 290 ntBASIC2.82□□□□□ -1.96
PPP4R4Q6NUP7 RPL17P51-201ENST00000605218 238 ntBASIC2.82□□□□□ -1.96
PPP4R4Q6NUP7 AC005000.2-201ENST00000605468 310 ntBASIC2.82□□□□□ -1.96
PPP4R4Q6NUP7 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.82□□□□□ -1.96
PPP4R4Q6NUP7 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
PPP4R4Q6NUP7 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.82□□□□□ -1.96
PPP4R4Q6NUP7 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.81□□□□□ -1.96
PPP4R4Q6NUP7 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.81□□□□□ -1.96
PPP4R4Q6NUP7 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
PPP4R4Q6NUP7 ZNF204P-201ENST00000416749 2397 ntBASIC2.81□□□□□ -1.96
PPP4R4Q6NUP7 Y_RNA.112-201ENST00000363250 102 ntBASIC2.81□□□□□ -1.96
PPP4R4Q6NUP7 RNU6-137P-201ENST00000363680 108 ntBASIC2.81□□□□□ -1.96
PPP4R4Q6NUP7 RNU6-694P-201ENST00000364071 147 ntBASIC2.81□□□□□ -1.96
PPP4R4Q6NUP7 RNY3P11-201ENST00000364153 102 ntBASIC2.81□□□□□ -1.96
PPP4R4Q6NUP7 Y_RNA.364-201ENST00000365532 101 ntBASIC2.81□□□□□ -1.96
PPP4R4Q6NUP7 NDUFB4P4-201ENST00000404822 243 ntBASIC2.81□□□□□ -1.96
PPP4R4Q6NUP7 RNA5SP270-201ENST00000411361 118 ntBASIC2.81□□□□□ -1.96
PPP4R4Q6NUP7 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.81□□□□□ -1.96
PPP4R4Q6NUP7 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.81□□□□□ -1.96
PPP4R4Q6NUP7 AC027124.2-201ENST00000428249 105 ntBASIC2.81□□□□□ -1.96
PPP4R4Q6NUP7 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.81□□□□□ -1.96
PPP4R4Q6NUP7 UBE2V1P7-201ENST00000446395 340 ntBASIC2.81□□□□□ -1.96
PPP4R4Q6NUP7 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.81□□□□□ -1.96
PPP4R4Q6NUP7 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.81□□□□□ -1.96
PPP4R4Q6NUP7 MTCO3P8-201ENST00000453691 755 ntBASIC2.81□□□□□ -1.96
PPP4R4Q6NUP7 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 244.4 ms