Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 SNORD65B-201ENST00000459126 73 ntBASIC4.32□□□□□ -1.72
PTCRAQ6ISU1 RNU7-57P-201ENST00000459540 60 ntBASIC4.32□□□□□ -1.72
PTCRAQ6ISU1 RN7SL323P-201ENST00000494712 295 ntBASIC4.32□□□□□ -1.72
PTCRAQ6ISU1 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.32□□□□□ -1.72
PTCRAQ6ISU1 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.32□□□□□ -1.72
PTCRAQ6ISU1 MIR3690-201ENST00000580266 75 ntBASIC4.32□□□□□ -1.72
PTCRAQ6ISU1 AC233702.9-201ENST00000581528 203 ntBASIC4.32□□□□□ -1.72
PTCRAQ6ISU1 AC091905.2-201ENST00000623143 306 ntBASIC4.32□□□□□ -1.72
PTCRAQ6ISU1 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PTCRAQ6ISU1 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC4.32□□□□□ -1.72
PTCRAQ6ISU1 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTCRAQ6ISU1 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PTCRAQ6ISU1 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PTCRAQ6ISU1 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
PTCRAQ6ISU1 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTCRAQ6ISU1 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.32□□□□□ -1.72
PTCRAQ6ISU1 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTCRAQ6ISU1 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.31□□□□□ -1.72
PTCRAQ6ISU1 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTCRAQ6ISU1 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.31□□□□□ -1.72
PTCRAQ6ISU1 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PTCRAQ6ISU1 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTCRAQ6ISU1 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTCRAQ6ISU1 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTCRAQ6ISU1 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTCRAQ6ISU1 AL356292.1-201ENST00000283110 373 ntBASIC4.31□□□□□ -1.72
PTCRAQ6ISU1 Y_RNA.52-201ENST00000362760 96 ntBASIC4.31□□□□□ -1.72
PTCRAQ6ISU1 Y_RNA.85-201ENST00000363014 111 ntBASIC4.31□□□□□ -1.72
PTCRAQ6ISU1 RNU6-640P-201ENST00000363693 105 ntBASIC4.31□□□□□ -1.72
PTCRAQ6ISU1 RNU6-756P-201ENST00000383997 107 ntBASIC4.31□□□□□ -1.72
PTCRAQ6ISU1 RNU1-57P-201ENST00000384491 166 ntBASIC4.31□□□□□ -1.72
PTCRAQ6ISU1 U8.11-201ENST00000384699 133 ntBASIC4.31□□□□□ -1.72
PTCRAQ6ISU1 AL139095.1-201ENST00000404326 391 ntBASIC4.31□□□□□ -1.72
PTCRAQ6ISU1 RNA5SP136-201ENST00000410906 107 ntBASIC4.31□□□□□ -1.72
PTCRAQ6ISU1 RPL36AP10-201ENST00000421785 322 ntBASIC4.31□□□□□ -1.72
PTCRAQ6ISU1 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.31□□□□□ -1.72
PTCRAQ6ISU1 U8.18-201ENST00000459285 133 ntBASIC4.31□□□□□ -1.72
PTCRAQ6ISU1 KRTAP13-6P-201ENST00000508999 371 ntBASIC4.31□□□□□ -1.72
PTCRAQ6ISU1 RNA5SP20-201ENST00000515976 84 ntBASIC4.31□□□□□ -1.72
PTCRAQ6ISU1 AC007012.1-201ENST00000567192 175 ntBASIC4.31□□□□□ -1.72
PTCRAQ6ISU1 MIR4662B-201ENST00000579498 81 ntBASIC4.31□□□□□ -1.72
PTCRAQ6ISU1 AL160290.3-201ENST00000604869 165 ntBASIC4.31□□□□□ -1.72
PTCRAQ6ISU1 RNU1-30P-201ENST00000606575 163 ntBASIC4.31□□□□□ -1.72
PTCRAQ6ISU1 AL110115.1-201ENST00000614396 364 ntBASIC4.31□□□□□ -1.72
PTCRAQ6ISU1 5S_rRNA.13-201ENST00000622298 123 ntBASIC4.31□□□□□ -1.72
PTCRAQ6ISU1 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTCRAQ6ISU1 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.31□□□□□ -1.72
PTCRAQ6ISU1 MAPK10-286ENST00000641208 8747 ntBASIC4.31□□□□□ -1.72
PTCRAQ6ISU1 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
PTCRAQ6ISU1 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
PTCRAQ6ISU1 AC068647.1-201ENST00000489539 2265 ntBASIC4.3□□□□□ -1.72
PTCRAQ6ISU1 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PTCRAQ6ISU1 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.3□□□□□ -1.72
PTCRAQ6ISU1 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.3□□□□□ -1.72
PTCRAQ6ISU1 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.3□□□□□ -1.72
PTCRAQ6ISU1 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
PTCRAQ6ISU1 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
PTCRAQ6ISU1 RNU6-508P-201ENST00000363231 103 ntBASIC4.3□□□□□ -1.72
PTCRAQ6ISU1 RNU4-13P-201ENST00000364019 141 ntBASIC4.3□□□□□ -1.72
PTCRAQ6ISU1 RNA5SP125-201ENST00000364843 120 ntBASIC4.3□□□□□ -1.72
PTCRAQ6ISU1 Y_RNA.328-201ENST00000365208 113 ntBASIC4.3□□□□□ -1.72
PTCRAQ6ISU1 RNU6-1113P-201ENST00000384348 107 ntBASIC4.3□□□□□ -1.72
PTCRAQ6ISU1 RNVU1-14-201ENST00000384770 164 ntBASIC4.3□□□□□ -1.72
PTCRAQ6ISU1 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.3□□□□□ -1.72
PTCRAQ6ISU1 AL353705.1-201ENST00000433468 480 ntBASIC4.3□□□□□ -1.72
PTCRAQ6ISU1 AF228730.3-201ENST00000436691 102 ntBASIC4.3□□□□□ -1.72
PTCRAQ6ISU1 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC4.3□□□□□ -1.72
PTCRAQ6ISU1 RBMY2UP-201ENST00000453474 324 ntBASIC4.3□□□□□ -1.72
PTCRAQ6ISU1 RNU5F-4P-201ENST00000516581 114 ntBASIC4.3□□□□□ -1.72
PTCRAQ6ISU1 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.3□□□□□ -1.72
PTCRAQ6ISU1 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.3□□□□□ -1.72
PTCRAQ6ISU1 U3.45-201ENST00000607547 219 ntBASIC4.3□□□□□ -1.72
PTCRAQ6ISU1 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.3□□□□□ -1.72
PTCRAQ6ISU1 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.3□□□□□ -1.72
PTCRAQ6ISU1 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PTCRAQ6ISU1 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
PTCRAQ6ISU1 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PTCRAQ6ISU1 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PTCRAQ6ISU1 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.3□□□□□ -1.72
PTCRAQ6ISU1 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PTCRAQ6ISU1 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.29□□□□□ -1.72
PTCRAQ6ISU1 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.29□□□□□ -1.72
PTCRAQ6ISU1 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.29□□□□□ -1.72
PTCRAQ6ISU1 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PTCRAQ6ISU1 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
PTCRAQ6ISU1 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PTCRAQ6ISU1 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PTCRAQ6ISU1 Y_RNA.91-201ENST00000363042 107 ntBASIC4.29□□□□□ -1.72
PTCRAQ6ISU1 Y_RNA.388-201ENST00000383919 113 ntBASIC4.29□□□□□ -1.72
PTCRAQ6ISU1 Y_RNA.528-201ENST00000384575 108 ntBASIC4.29□□□□□ -1.72
PTCRAQ6ISU1 MIR1271-201ENST00000408537 86 ntBASIC4.29□□□□□ -1.72
PTCRAQ6ISU1 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC4.29□□□□□ -1.72
PTCRAQ6ISU1 RNA5SP103-201ENST00000459503 118 ntBASIC4.29□□□□□ -1.72
PTCRAQ6ISU1 AC010531.2-201ENST00000465012 153 ntBASIC4.29□□□□□ -1.72
PTCRAQ6ISU1 AL365205.2-201ENST00000594586 68 ntBASIC4.29□□□□□ -1.72
PTCRAQ6ISU1 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.29□□□□□ -1.72
PTCRAQ6ISU1 AC007546.2-201ENST00000623996 360 ntBASIC4.29□□□□□ -1.72
PTCRAQ6ISU1 AC006435.5-201ENST00000624486 112 ntBASIC4.29□□□□□ -1.72
PTCRAQ6ISU1 SCARNA15.3-201ENST00000626315 122 ntBASIC4.29□□□□□ -1.72
PTCRAQ6ISU1 SCARNA4.1-201ENST00000628597 123 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms