Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.62□□□□□ -2.15
ATL3Q6DD88 AC091885.1-201ENST00000506658 268 ntBASIC1.62□□□□□ -2.15
ATL3Q6DD88 AC116337.1-201ENST00000509680 687 ntBASIC1.62□□□□□ -2.15
ATL3Q6DD88 RNU6-991P-201ENST00000516168 107 ntBASIC1.62□□□□□ -2.15
ATL3Q6DD88 RNA5SP61-201ENST00000516453 100 ntBASIC1.62□□□□□ -2.15
ATL3Q6DD88 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.62□□□□□ -2.15
ATL3Q6DD88 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.62□□□□□ -2.15
ATL3Q6DD88 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.62□□□□□ -2.15
ATL3Q6DD88 MIR3923-201ENST00000579521 83 ntBASIC1.62□□□□□ -2.15
ATL3Q6DD88 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.62□□□□□ -2.15
ATL3Q6DD88 AC010900.2-201ENST00000604508 210 ntBASIC1.62□□□□□ -2.15
ATL3Q6DD88 AC103810.8-201ENST00000607347 118 ntBASIC1.62□□□□□ -2.15
ATL3Q6DD88 AC064836.2-201ENST00000609491 462 ntBASIC1.62□□□□□ -2.15
ATL3Q6DD88 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
ATL3Q6DD88 RNA5SP190-201ENST00000365222 118 ntBASIC1.61□□□□□ -2.15
ATL3Q6DD88 RNU6-1042P-201ENST00000384204 107 ntBASIC1.61□□□□□ -2.15
ATL3Q6DD88 RNU6-378P-201ENST00000384324 107 ntBASIC1.61□□□□□ -2.15
ATL3Q6DD88 MIR597-201ENST00000384968 97 ntBASIC1.61□□□□□ -2.15
ATL3Q6DD88 MIR758-201ENST00000390227 88 ntBASIC1.61□□□□□ -2.15
ATL3Q6DD88 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
ATL3Q6DD88 AL513185.2-201ENST00000425543 193 ntBASIC1.61□□□□□ -2.15
ATL3Q6DD88 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.61□□□□□ -2.15
ATL3Q6DD88 MTND3P16-201ENST00000452205 344 ntBASIC1.61□□□□□ -2.15
ATL3Q6DD88 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.61□□□□□ -2.15
ATL3Q6DD88 SRRM1P2-201ENST00000464531 1192 ntBASIC1.61□□□□□ -2.15
ATL3Q6DD88 AC016632.1-201ENST00000503994 196 ntBASIC1.61□□□□□ -2.15
ATL3Q6DD88 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.61□□□□□ -2.15
ATL3Q6DD88 RNA5SP401-201ENST00000515920 127 ntBASIC1.61□□□□□ -2.15
ATL3Q6DD88 AP005660.1-201ENST00000522972 293 ntBASIC1.61□□□□□ -2.15
ATL3Q6DD88 MIR3169-201ENST00000578032 83 ntBASIC1.61□□□□□ -2.15
ATL3Q6DD88 MIR5692C1-201ENST00000585309 91 ntBASIC1.61□□□□□ -2.15
ATL3Q6DD88 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.61□□□□□ -2.15
ATL3Q6DD88 AL158209.2-201ENST00000619266 216 ntBASIC1.61□□□□□ -2.15
ATL3Q6DD88 AL359880.1-201ENST00000621879 266 ntBASIC1.61□□□□□ -2.15
ATL3Q6DD88 AC130454.1-201ENST00000622948 401 ntBASIC1.61□□□□□ -2.15
ATL3Q6DD88 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
ATL3Q6DD88 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
ATL3Q6DD88 RNA5SP99-201ENST00000364020 114 ntBASIC1.6□□□□□ -2.15
ATL3Q6DD88 RNA5SP493-201ENST00000364115 91 ntBASIC1.6□□□□□ -2.15
ATL3Q6DD88 SNORA36A-201ENST00000384221 132 ntBASIC1.6□□□□□ -2.15
ATL3Q6DD88 MIR514A2-201ENST00000385131 88 ntBASIC1.6□□□□□ -2.15
ATL3Q6DD88 MIR514A3-201ENST00000385132 88 ntBASIC1.6□□□□□ -2.15
ATL3Q6DD88 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.6□□□□□ -2.15
ATL3Q6DD88 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.6□□□□□ -2.15
ATL3Q6DD88 SNRPGP13-201ENST00000442212 177 ntBASIC1.6□□□□□ -2.15
ATL3Q6DD88 RNU6-1037P-201ENST00000459571 107 ntBASIC1.6□□□□□ -2.15
ATL3Q6DD88 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.6□□□□□ -2.15
ATL3Q6DD88 AC019235.1-201ENST00000503847 207 ntBASIC1.6□□□□□ -2.15
ATL3Q6DD88 AC093534.1-201ENST00000504977 132 ntBASIC1.6□□□□□ -2.15
ATL3Q6DD88 RPL39P5-202ENST00000512505 151 ntBASIC1.6□□□□□ -2.15
ATL3Q6DD88 AC108729.3-201ENST00000513484 108 ntBASIC1.6□□□□□ -2.15
ATL3Q6DD88 Y_RNA.693-201ENST00000516641 110 ntBASIC1.6□□□□□ -2.15
ATL3Q6DD88 AC087854.1-201ENST00000519706 414 ntBASIC1.6□□□□□ -2.15
ATL3Q6DD88 AC109446.1-201ENST00000566172 220 ntBASIC1.6□□□□□ -2.15
ATL3Q6DD88 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.6□□□□□ -2.15
ATL3Q6DD88 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.6□□□□□ -2.15
ATL3Q6DD88 OR5AK4P-201ENST00000635912 903 ntBASIC1.6□□□□□ -2.15
ATL3Q6DD88 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.6□□□□□ -2.15
ATL3Q6DD88 RNU6-23P-201ENST00000363283 107 ntBASIC1.59□□□□□ -2.15
ATL3Q6DD88 RNU4-66P-201ENST00000365199 138 ntBASIC1.59□□□□□ -2.15
ATL3Q6DD88 MIR30A-201ENST00000385092 71 ntBASIC1.59□□□□□ -2.15
ATL3Q6DD88 RNU2-41P-201ENST00000410991 178 ntBASIC1.59□□□□□ -2.15
ATL3Q6DD88 RNU1-131P-201ENST00000458943 161 ntBASIC1.59□□□□□ -2.15
ATL3Q6DD88 AC107401.1-201ENST00000503426 685 ntBASIC1.59□□□□□ -2.15
ATL3Q6DD88 ATP5EP1-201ENST00000510257 156 ntBASIC1.59□□□□□ -2.15
ATL3Q6DD88 RNU6-323P-201ENST00000521915 107 ntBASIC1.59□□□□□ -2.15
ATL3Q6DD88 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.59□□□□□ -2.15
ATL3Q6DD88 EIF4A1P12-201ENST00000551910 141 ntBASIC1.59□□□□□ -2.15
ATL3Q6DD88 AC024909.2-201ENST00000553035 286 ntBASIC1.59□□□□□ -2.15
ATL3Q6DD88 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.59□□□□□ -2.15
ATL3Q6DD88 CYP4A27P-201ENST00000567218 190 ntBASIC1.59□□□□□ -2.15
ATL3Q6DD88 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.59□□□□□ -2.15
ATL3Q6DD88 Z98751.3-201ENST00000604447 521 ntBASIC1.59□□□□□ -2.15
ATL3Q6DD88 AC073534.2-201ENST00000620377 381 ntBASIC1.59□□□□□ -2.15
ATL3Q6DD88 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.59□□□□□ -2.15
ATL3Q6DD88 AC022513.1-201ENST00000624512 117 ntBASIC1.59□□□□□ -2.15
ATL3Q6DD88 AC121333.1-201ENST00000567488 2709 ntBASIC1.58□□□□□ -2.16
ATL3Q6DD88 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
ATL3Q6DD88 RNU6-661P-201ENST00000362409 107 ntBASIC1.58□□□□□ -2.16
ATL3Q6DD88 RNU6-1085P-201ENST00000363576 107 ntBASIC1.58□□□□□ -2.16
ATL3Q6DD88 U3.9-201ENST00000363823 204 ntBASIC1.58□□□□□ -2.16
ATL3Q6DD88 Y_RNA.194-201ENST00000363985 102 ntBASIC1.58□□□□□ -2.16
ATL3Q6DD88 RNU6-522P-201ENST00000364497 107 ntBASIC1.58□□□□□ -2.16
ATL3Q6DD88 RNU4-56P-201ENST00000364700 142 ntBASIC1.58□□□□□ -2.16
ATL3Q6DD88 RNU6-1329P-201ENST00000365664 107 ntBASIC1.58□□□□□ -2.16
ATL3Q6DD88 Y_RNA.504-201ENST00000384481 104 ntBASIC1.58□□□□□ -2.16
ATL3Q6DD88 SNORA12.2-201ENST00000391040 156 ntBASIC1.58□□□□□ -2.16
ATL3Q6DD88 RNU2-16P-201ENST00000410712 136 ntBASIC1.58□□□□□ -2.16
ATL3Q6DD88 RN7SKP51-201ENST00000410781 304 ntBASIC1.58□□□□□ -2.16
ATL3Q6DD88 TIMM9P3-201ENST00000428659 274 ntBASIC1.58□□□□□ -2.16
ATL3Q6DD88 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.58□□□□□ -2.16
ATL3Q6DD88 MTND2P22-201ENST00000444325 1033 ntBASIC1.58□□□□□ -2.16
ATL3Q6DD88 RNU6-1208P-201ENST00000459588 107 ntBASIC1.58□□□□□ -2.16
ATL3Q6DD88 Y_RNA.654-201ENST00000497848 106 ntBASIC1.58□□□□□ -2.16
ATL3Q6DD88 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.58□□□□□ -2.16
ATL3Q6DD88 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.58□□□□□ -2.16
ATL3Q6DD88 FAM206BP-201ENST00000510179 541 ntBASIC1.58□□□□□ -2.16
ATL3Q6DD88 AC005741.1-201ENST00000511094 432 ntBASIC1.58□□□□□ -2.16
ATL3Q6DD88 AC092436.3-201ENST00000511788 257 ntBASIC1.58□□□□□ -2.16
ATL3Q6DD88 RNU6-612P-201ENST00000516909 102 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 140.6 ms