Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC3.95□□□□□ -1.78
RNFT1Q5M7Z0 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RNFT1Q5M7Z0 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.95□□□□□ -1.78
RNFT1Q5M7Z0 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.95□□□□□ -1.78
RNFT1Q5M7Z0 SNORA27.1-201ENST00000362604 124 ntBASIC3.95□□□□□ -1.78
RNFT1Q5M7Z0 RNU6-884P-201ENST00000363889 107 ntBASIC3.95□□□□□ -1.78
RNFT1Q5M7Z0 RNA5SP189-201ENST00000364920 115 ntBASIC3.95□□□□□ -1.78
RNFT1Q5M7Z0 RNU1-13P-201ENST00000384499 162 ntBASIC3.95□□□□□ -1.78
RNFT1Q5M7Z0 RPL23AP48-201ENST00000406913 488 ntBASIC3.95□□□□□ -1.78
RNFT1Q5M7Z0 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.95□□□□□ -1.78
RNFT1Q5M7Z0 HMGN2P10-201ENST00000448085 265 ntBASIC3.95□□□□□ -1.78
RNFT1Q5M7Z0 snoU13.24-201ENST00000458998 104 ntBASIC3.95□□□□□ -1.78
RNFT1Q5M7Z0 RPS27AP10-201ENST00000496103 208 ntBASIC3.95□□□□□ -1.78
RNFT1Q5M7Z0 ACA59.2-201ENST00000517061 156 ntBASIC3.95□□□□□ -1.78
RNFT1Q5M7Z0 AC084364.2-201ENST00000546924 395 ntBASIC3.95□□□□□ -1.78
RNFT1Q5M7Z0 AC019288.1-201ENST00000557918 224 ntBASIC3.95□□□□□ -1.78
RNFT1Q5M7Z0 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.95□□□□□ -1.78
RNFT1Q5M7Z0 IGLL4P-201ENST00000614590 133 ntBASIC3.95□□□□□ -1.78
RNFT1Q5M7Z0 MIR492-201ENST00000638676 116 ntBASIC3.95□□□□□ -1.78
RNFT1Q5M7Z0 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
RNFT1Q5M7Z0 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.95□□□□□ -1.78
RNFT1Q5M7Z0 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RNFT1Q5M7Z0 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC3.95□□□□□ -1.78
RNFT1Q5M7Z0 GHR-213ENST00000622294 4312 ntTSL 5 BASIC3.95□□□□□ -1.78
RNFT1Q5M7Z0 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC3.95□□□□□ -1.78
RNFT1Q5M7Z0 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC3.95□□□□□ -1.78
RNFT1Q5M7Z0 MFSD8-242ENST00000641690 4199 ntBASIC3.95□□□□□ -1.78
RNFT1Q5M7Z0 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.94□□□□□ -1.78
RNFT1Q5M7Z0 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RNFT1Q5M7Z0 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
RNFT1Q5M7Z0 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
RNFT1Q5M7Z0 SNORA31-201ENST00000362607 130 ntBASIC3.94□□□□□ -1.78
RNFT1Q5M7Z0 Y_RNA.213-201ENST00000364178 111 ntBASIC3.94□□□□□ -1.78
RNFT1Q5M7Z0 SNORA7.2-201ENST00000364446 145 ntBASIC3.94□□□□□ -1.78
RNFT1Q5M7Z0 RNU6-335P-201ENST00000364563 113 ntBASIC3.94□□□□□ -1.78
RNFT1Q5M7Z0 RNU6-1138P-201ENST00000365359 106 ntBASIC3.94□□□□□ -1.78
RNFT1Q5M7Z0 RNU6-1292P-201ENST00000383856 107 ntBASIC3.94□□□□□ -1.78
RNFT1Q5M7Z0 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.94□□□□□ -1.78
RNFT1Q5M7Z0 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.94□□□□□ -1.78
RNFT1Q5M7Z0 NDUFB1P1-201ENST00000435191 180 ntBASIC3.94□□□□□ -1.78
RNFT1Q5M7Z0 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.94□□□□□ -1.78
RNFT1Q5M7Z0 TVP23BP1-201ENST00000557500 617 ntBASIC3.94□□□□□ -1.78
RNFT1Q5M7Z0 RN7SL600P-201ENST00000581811 299 ntBASIC3.94□□□□□ -1.78
RNFT1Q5M7Z0 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.94□□□□□ -1.78
RNFT1Q5M7Z0 AL160290.3-201ENST00000604869 165 ntBASIC3.94□□□□□ -1.78
RNFT1Q5M7Z0 AC107294.3-201ENST00000609211 526 ntBASIC3.94□□□□□ -1.78
RNFT1Q5M7Z0 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.94□□□□□ -1.78
RNFT1Q5M7Z0 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
RNFT1Q5M7Z0 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
RNFT1Q5M7Z0 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RNFT1Q5M7Z0 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
RNFT1Q5M7Z0 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RNFT1Q5M7Z0 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
RNFT1Q5M7Z0 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.93□□□□□ -1.78
RNFT1Q5M7Z0 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RNFT1Q5M7Z0 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.93□□□□□ -1.78
RNFT1Q5M7Z0 RNU6-600P-201ENST00000362524 99 ntBASIC3.93□□□□□ -1.78
RNFT1Q5M7Z0 Y_RNA.66-201ENST00000362862 102 ntBASIC3.93□□□□□ -1.78
RNFT1Q5M7Z0 MIR586-201ENST00000385035 97 ntBASIC3.93□□□□□ -1.78
RNFT1Q5M7Z0 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.93□□□□□ -1.78
RNFT1Q5M7Z0 AL500522.2-201ENST00000448562 343 ntBASIC3.93□□□□□ -1.78
RNFT1Q5M7Z0 snoU13.4-201ENST00000458916 104 ntBASIC3.93□□□□□ -1.78
RNFT1Q5M7Z0 AC091826.1-201ENST00000514065 313 ntBASIC3.93□□□□□ -1.78
RNFT1Q5M7Z0 RNA5SP519-201ENST00000516480 119 ntBASIC3.93□□□□□ -1.78
RNFT1Q5M7Z0 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC3.93□□□□□ -1.78
RNFT1Q5M7Z0 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RNFT1Q5M7Z0 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.93□□□□□ -1.78
RNFT1Q5M7Z0 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.93□□□□□ -1.78
RNFT1Q5M7Z0 AC105137.2-201ENST00000569073 466 ntBASIC3.93□□□□□ -1.78
RNFT1Q5M7Z0 SNRPGP15-201ENST00000600149 222 ntBASIC3.93□□□□□ -1.78
RNFT1Q5M7Z0 SNX18P1Y-201ENST00000616231 511 ntBASIC3.93□□□□□ -1.78
RNFT1Q5M7Z0 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.93□□□□□ -1.78
RNFT1Q5M7Z0 MIR8059-201ENST00000620427 81 ntBASIC3.93□□□□□ -1.78
RNFT1Q5M7Z0 AC091905.2-201ENST00000623143 306 ntBASIC3.93□□□□□ -1.78
RNFT1Q5M7Z0 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RNFT1Q5M7Z0 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.93□□□□□ -1.78
RNFT1Q5M7Z0 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.93□□□□□ -1.78
RNFT1Q5M7Z0 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.93□□□□□ -1.78
RNFT1Q5M7Z0 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
RNFT1Q5M7Z0 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RNFT1Q5M7Z0 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RNFT1Q5M7Z0 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
RNFT1Q5M7Z0 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RNFT1Q5M7Z0 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.92□□□□□ -1.78
RNFT1Q5M7Z0 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC3.92□□□□□ -1.78
RNFT1Q5M7Z0 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
RNFT1Q5M7Z0 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RNFT1Q5M7Z0 RNA5SP388-201ENST00000362584 119 ntBASIC3.92□□□□□ -1.78
RNFT1Q5M7Z0 RNU6-414P-201ENST00000363705 104 ntBASIC3.92□□□□□ -1.78
RNFT1Q5M7Z0 RN7SKP280-201ENST00000364196 304 ntBASIC3.92□□□□□ -1.78
RNFT1Q5M7Z0 RNU6-787P-201ENST00000384032 107 ntBASIC3.92□□□□□ -1.78
RNFT1Q5M7Z0 RNU6-1197P-201ENST00000391183 107 ntBASIC3.92□□□□□ -1.78
RNFT1Q5M7Z0 AL157831.1-201ENST00000426134 473 ntBASIC3.92□□□□□ -1.78
RNFT1Q5M7Z0 SNORD11-201ENST00000459124 84 ntBASIC3.92□□□□□ -1.78
RNFT1Q5M7Z0 AC011406.1-201ENST00000512440 370 ntBASIC3.92□□□□□ -1.78
RNFT1Q5M7Z0 RNU6-857P-201ENST00000515893 110 ntBASIC3.92□□□□□ -1.78
RNFT1Q5M7Z0 AC074050.1-201ENST00000563247 211 ntBASIC3.92□□□□□ -1.78
RNFT1Q5M7Z0 RPL23AP91-201ENST00000569211 455 ntBASIC3.92□□□□□ -1.78
RNFT1Q5M7Z0 MIR1254-2-201ENST00000579553 63 ntBASIC3.92□□□□□ -1.78
RNFT1Q5M7Z0 MIR8069-1-201ENST00000616627 86 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms