Protein–RNA interactions for Protein: Q53F19

NCBP3, Nuclear cap-binding protein subunit 3, humanhuman

Known RBP Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3Q53F19 AL591926.8-201ENST00000616876 211 ntBASIC6.67□□□□□ -1.34
NCBP3Q53F19 AC091932.4-201ENST00000623386 200 ntBASIC6.67□□□□□ -1.34
NCBP3Q53F19 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC6.67□□□□□ -1.34
NCBP3Q53F19 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
NCBP3Q53F19 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
NCBP3Q53F19 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
NCBP3Q53F19 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
NCBP3Q53F19 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
NCBP3Q53F19 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NCBP3Q53F19 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NCBP3Q53F19 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NCBP3Q53F19 DHX9P1-201ENST00000436565 3076 ntBASIC6.66□□□□□ -1.34
NCBP3Q53F19 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC6.66□□□□□ -1.34
NCBP3Q53F19 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
NCBP3Q53F19 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC6.66□□□□□ -1.34
NCBP3Q53F19 ICE2P2-201ENST00000483823 2787 ntBASIC6.66□□□□□ -1.34
NCBP3Q53F19 AC018630.2-201ENST00000534866 2403 ntBASIC6.66□□□□□ -1.34
NCBP3Q53F19 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
NCBP3Q53F19 SNORD115-19-201ENST00000363098 82 ntBASIC6.66□□□□□ -1.34
NCBP3Q53F19 SNORD115-18-201ENST00000363293 82 ntBASIC6.66□□□□□ -1.34
NCBP3Q53F19 SNORD115-17-201ENST00000364612 82 ntBASIC6.66□□□□□ -1.34
NCBP3Q53F19 SPTLC1P2-201ENST00000407089 121 ntBASIC6.66□□□□□ -1.34
NCBP3Q53F19 SNORA77-201ENST00000408716 125 ntBASIC6.66□□□□□ -1.34
NCBP3Q53F19 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC6.66□□□□□ -1.34
NCBP3Q53F19 RN7SL517P-201ENST00000462240 305 ntBASIC6.66□□□□□ -1.34
NCBP3Q53F19 RNU6-965P-201ENST00000516721 96 ntBASIC6.66□□□□□ -1.34
NCBP3Q53F19 AC006441.5-201ENST00000612680 209 ntBASIC6.66□□□□□ -1.34
NCBP3Q53F19 U2.20-201ENST00000613956 192 ntBASIC6.66□□□□□ -1.34
NCBP3Q53F19 AC006160.2-201ENST00000637708 154 ntBASIC6.66□□□□□ -1.34
NCBP3Q53F19 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
NCBP3Q53F19 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
NCBP3Q53F19 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC6.65□□□□□ -1.34
NCBP3Q53F19 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC6.65□□□□□ -1.34
NCBP3Q53F19 RNU1-96P-201ENST00000364163 162 ntBASIC6.65□□□□□ -1.34
NCBP3Q53F19 SNORA58B-201ENST00000364259 136 ntBASIC6.65□□□□□ -1.34
NCBP3Q53F19 SNORD38C-201ENST00000384381 69 ntBASIC6.65□□□□□ -1.34
NCBP3Q53F19 MIR522-201ENST00000385071 87 ntBASIC6.65□□□□□ -1.34
NCBP3Q53F19 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC6.65□□□□□ -1.34
NCBP3Q53F19 RPL12P3-201ENST00000440080 396 ntBASIC6.65□□□□□ -1.34
NCBP3Q53F19 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC6.65□□□□□ -1.34
NCBP3Q53F19 Y_RNA.659-201ENST00000515994 113 ntBASIC6.65□□□□□ -1.34
NCBP3Q53F19 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC6.65□□□□□ -1.34
NCBP3Q53F19 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC6.65□□□□□ -1.34
NCBP3Q53F19 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC6.65□□□□□ -1.35
NCBP3Q53F19 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
NCBP3Q53F19 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC6.65□□□□□ -1.35
NCBP3Q53F19 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
NCBP3Q53F19 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
NCBP3Q53F19 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NCBP3Q53F19 Y_RNA.4-201ENST00000362333 112 ntBASIC6.64□□□□□ -1.35
NCBP3Q53F19 Y_RNA.95-201ENST00000363079 95 ntBASIC6.64□□□□□ -1.35
NCBP3Q53F19 Y_RNA.467-201ENST00000384297 102 ntBASIC6.64□□□□□ -1.35
NCBP3Q53F19 MIR765-201ENST00000390226 114 ntBASIC6.64□□□□□ -1.35
NCBP3Q53F19 SNORA7.5-201ENST00000410672 110 ntBASIC6.64□□□□□ -1.35
NCBP3Q53F19 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC6.64□□□□□ -1.35
NCBP3Q53F19 SNORA4.4-201ENST00000515921 135 ntBASIC6.64□□□□□ -1.35
NCBP3Q53F19 AP006245.2-201ENST00000522004 300 ntBASIC6.64□□□□□ -1.35
NCBP3Q53F19 ATP5J2P6-201ENST00000565203 266 ntBASIC6.64□□□□□ -1.35
NCBP3Q53F19 MIR4765-201ENST00000585007 77 ntBASIC6.64□□□□□ -1.35
NCBP3Q53F19 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC6.64□□□□□ -1.35
NCBP3Q53F19 AC006111.3-201ENST00000622137 383 ntBASIC6.64□□□□□ -1.35
NCBP3Q53F19 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC6.64□□□□□ -1.35
NCBP3Q53F19 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NCBP3Q53F19 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NCBP3Q53F19 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NCBP3Q53F19 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC6.63□□□□□ -1.35
NCBP3Q53F19 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NCBP3Q53F19 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
NCBP3Q53F19 RNU11-5P-201ENST00000391216 129 ntBASIC6.63□□□□□ -1.35
NCBP3Q53F19 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC6.63□□□□□ -1.35
NCBP3Q53F19 AC231760.1-201ENST00000498002 260 ntBASIC6.63□□□□□ -1.35
NCBP3Q53F19 RNA5SP43-201ENST00000516559 110 ntBASIC6.63□□□□□ -1.35
NCBP3Q53F19 BNIP3P1-201ENST00000547295 580 ntBASIC6.63□□□□□ -1.35
NCBP3Q53F19 AC091544.4-201ENST00000555268 342 ntBASIC6.63□□□□□ -1.35
NCBP3Q53F19 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
NCBP3Q53F19 AL160290.3-201ENST00000604869 165 ntBASIC6.63□□□□□ -1.35
NCBP3Q53F19 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
NCBP3Q53F19 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NCBP3Q53F19 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
NCBP3Q53F19 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NCBP3Q53F19 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC6.63□□□□□ -1.35
NCBP3Q53F19 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
NCBP3Q53F19 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
NCBP3Q53F19 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
NCBP3Q53F19 MFSD8-236ENST00000641509 4050 ntBASIC6.62□□□□□ -1.35
NCBP3Q53F19 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
NCBP3Q53F19 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
NCBP3Q53F19 AL022311.1-201ENST00000623726 19416 ntBASIC6.62□□□□□ -1.35
NCBP3Q53F19 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
NCBP3Q53F19 RNA5SP305-201ENST00000362665 119 ntBASIC6.62□□□□□ -1.35
NCBP3Q53F19 RNU6-442P-201ENST00000383968 104 ntBASIC6.62□□□□□ -1.35
NCBP3Q53F19 AC104333.2-201ENST00000422630 192 ntBASIC6.62□□□□□ -1.35
NCBP3Q53F19 AP001486.1-201ENST00000463339 476 ntBASIC6.62□□□□□ -1.35
NCBP3Q53F19 RPS23P4-201ENST00000487908 423 ntBASIC6.62□□□□□ -1.35
NCBP3Q53F19 RAC1P2-201ENST00000511164 579 ntBASIC6.62□□□□□ -1.35
NCBP3Q53F19 RNU7-99P-201ENST00000516271 62 ntBASIC6.62□□□□□ -1.35
NCBP3Q53F19 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.62□□□□□ -1.35
NCBP3Q53F19 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
NCBP3Q53F19 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
NCBP3Q53F19 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 405.6 ms