Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SHROOM1Q2M3G4 MIR1248-201ENST00000629190 106 ntBASIC1.92□□□□□ -2.1
SHROOM1Q2M3G4 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
SHROOM1Q2M3G4 Y_RNA.167-201ENST00000363735 109 ntBASIC1.91□□□□□ -2.1
SHROOM1Q2M3G4 RNU6-82P-201ENST00000363970 107 ntBASIC1.91□□□□□ -2.1
SHROOM1Q2M3G4 RNU6-611P-201ENST00000384276 104 ntBASIC1.91□□□□□ -2.1
SHROOM1Q2M3G4 MIR29B2-201ENST00000385055 81 ntBASIC1.91□□□□□ -2.1
SHROOM1Q2M3G4 MIR514A2-201ENST00000385131 88 ntBASIC1.91□□□□□ -2.1
SHROOM1Q2M3G4 MIR514A3-201ENST00000385132 88 ntBASIC1.91□□□□□ -2.1
SHROOM1Q2M3G4 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
SHROOM1Q2M3G4 RNU6-908P-201ENST00000410160 94 ntBASIC1.91□□□□□ -2.1
SHROOM1Q2M3G4 AL590556.1-201ENST00000423231 483 ntBASIC1.91□□□□□ -2.1
SHROOM1Q2M3G4 MRPS10P2-201ENST00000431226 381 ntBASIC1.91□□□□□ -2.1
SHROOM1Q2M3G4 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.91□□□□□ -2.1
SHROOM1Q2M3G4 AMD1P1-201ENST00000457220 922 ntBASIC1.91□□□□□ -2.1
SHROOM1Q2M3G4 AC087854.1-201ENST00000519706 414 ntBASIC1.91□□□□□ -2.1
SHROOM1Q2M3G4 CTHRC1P1-201ENST00000605383 469 ntBASIC1.91□□□□□ -2.1
SHROOM1Q2M3G4 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.91□□□□□ -2.1
SHROOM1Q2M3G4 RMST_6.1-201ENST00000611980 203 ntBASIC1.91□□□□□ -2.1
SHROOM1Q2M3G4 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SHROOM1Q2M3G4 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
SHROOM1Q2M3G4 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
SHROOM1Q2M3G4 RNU4-13P-201ENST00000364019 141 ntBASIC1.9□□□□□ -2.11
SHROOM1Q2M3G4 RNU6-522P-201ENST00000364497 107 ntBASIC1.9□□□□□ -2.11
SHROOM1Q2M3G4 RNU6-1141P-201ENST00000364520 107 ntBASIC1.9□□□□□ -2.11
SHROOM1Q2M3G4 RNU6-1317P-201ENST00000364582 104 ntBASIC1.9□□□□□ -2.11
SHROOM1Q2M3G4 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
SHROOM1Q2M3G4 SUMO2P12-201ENST00000405924 140 ntBASIC1.9□□□□□ -2.11
SHROOM1Q2M3G4 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.9□□□□□ -2.11
SHROOM1Q2M3G4 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.9□□□□□ -2.11
SHROOM1Q2M3G4 ERLEC1P1-201ENST00000433806 578 ntBASIC1.9□□□□□ -2.11
SHROOM1Q2M3G4 IFNA20P-201ENST00000436840 528 ntBASIC1.9□□□□□ -2.11
SHROOM1Q2M3G4 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.9□□□□□ -2.11
SHROOM1Q2M3G4 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.9□□□□□ -2.11
SHROOM1Q2M3G4 AC092436.3-201ENST00000511788 257 ntBASIC1.9□□□□□ -2.11
SHROOM1Q2M3G4 RNU6-720P-201ENST00000516363 108 ntBASIC1.9□□□□□ -2.11
SHROOM1Q2M3G4 SNORD60.2-201ENST00000516883 86 ntBASIC1.9□□□□□ -2.11
SHROOM1Q2M3G4 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.9□□□□□ -2.11
SHROOM1Q2M3G4 AC115990.1-201ENST00000526957 301 ntBASIC1.9□□□□□ -2.11
SHROOM1Q2M3G4 DNAJC19P9-201ENST00000555084 351 ntBASIC1.9□□□□□ -2.11
SHROOM1Q2M3G4 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.9□□□□□ -2.11
SHROOM1Q2M3G4 AC078795.3-201ENST00000602913 472 ntBASIC1.9□□□□□ -2.11
SHROOM1Q2M3G4 CYP2C61P-201ENST00000604072 290 ntBASIC1.9□□□□□ -2.11
SHROOM1Q2M3G4 AP001836.1-201ENST00000604675 523 ntBASIC1.9□□□□□ -2.11
SHROOM1Q2M3G4 DUXAP9-208ENST00000622815 614 ntBASIC1.9□□□□□ -2.11
SHROOM1Q2M3G4 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.9□□□□□ -2.11
SHROOM1Q2M3G4 AC068137.3-201ENST00000639191 341 ntBASIC1.9□□□□□ -2.11
SHROOM1Q2M3G4 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.9□□□□□ -2.11
SHROOM1Q2M3G4 AC245060.5-201ENST00000610778 3293 ntBASIC1.89□□□□□ -2.11
SHROOM1Q2M3G4 RNU4-12P-201ENST00000365233 139 ntBASIC1.89□□□□□ -2.11
SHROOM1Q2M3G4 RNU6-1106P-201ENST00000390845 107 ntBASIC1.89□□□□□ -2.11
SHROOM1Q2M3G4 RNU6-332P-201ENST00000391193 108 ntBASIC1.89□□□□□ -2.11
SHROOM1Q2M3G4 BTF3L4P2-201ENST00000392798 346 ntBASIC1.89□□□□□ -2.11
SHROOM1Q2M3G4 MIR450B-201ENST00000401182 78 ntBASIC1.89□□□□□ -2.11
SHROOM1Q2M3G4 MIR1262-201ENST00000408276 93 ntBASIC1.89□□□□□ -2.11
SHROOM1Q2M3G4 MTCO1P21-201ENST00000416634 589 ntBASIC1.89□□□□□ -2.11
SHROOM1Q2M3G4 UBE2V1P4-201ENST00000425374 344 ntBASIC1.89□□□□□ -2.11
SHROOM1Q2M3G4 MTCO2P3-201ENST00000442543 421 ntBASIC1.89□□□□□ -2.11
SHROOM1Q2M3G4 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.89□□□□□ -2.11
SHROOM1Q2M3G4 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.89□□□□□ -2.11
SHROOM1Q2M3G4 PRELID3BP1-201ENST00000457142 540 ntBASIC1.89□□□□□ -2.11
SHROOM1Q2M3G4 RPL9P9-202ENST00000466501 579 ntBASIC1.89□□□□□ -2.11
SHROOM1Q2M3G4 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.89□□□□□ -2.11
SHROOM1Q2M3G4 RN7SL274P-201ENST00000492268 272 ntBASIC1.89□□□□□ -2.11
SHROOM1Q2M3G4 AC091885.1-201ENST00000506658 268 ntBASIC1.89□□□□□ -2.11
SHROOM1Q2M3G4 RNU6-612P-201ENST00000516909 102 ntBASIC1.89□□□□□ -2.11
SHROOM1Q2M3G4 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.89□□□□□ -2.11
SHROOM1Q2M3G4 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.89□□□□□ -2.11
SHROOM1Q2M3G4 AC022616.8-201ENST00000533569 253 ntBASIC1.89□□□□□ -2.11
SHROOM1Q2M3G4 TRAV32-201ENST00000553993 340 ntBASIC1.89□□□□□ -2.11
SHROOM1Q2M3G4 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.89□□□□□ -2.11
SHROOM1Q2M3G4 AC015720.1-201ENST00000565251 277 ntBASIC1.89□□□□□ -2.11
SHROOM1Q2M3G4 AC109446.1-201ENST00000566172 220 ntBASIC1.89□□□□□ -2.11
SHROOM1Q2M3G4 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.89□□□□□ -2.11
SHROOM1Q2M3G4 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.89□□□□□ -2.11
SHROOM1Q2M3G4 DISC2.1-201ENST00000612827 205 ntBASIC1.89□□□□□ -2.11
SHROOM1Q2M3G4 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
SHROOM1Q2M3G4 AL132822.1-201ENST00000617063 513 ntBASIC1.89□□□□□ -2.11
SHROOM1Q2M3G4 FER-210ENST00000628534 558 ntTSL 5 BASIC1.89□□□□□ -2.11
SHROOM1Q2M3G4 MIR1321-201ENST00000637766 79 ntBASIC1.89□□□□□ -2.11
SHROOM1Q2M3G4 AC009541.1-201ENST00000438279 2662 ntBASIC1.89□□□□□ -2.11
SHROOM1Q2M3G4 RNU6-451P-201ENST00000362921 107 ntBASIC1.88□□□□□ -2.11
SHROOM1Q2M3G4 RNU6-1329P-201ENST00000365664 107 ntBASIC1.88□□□□□ -2.11
SHROOM1Q2M3G4 RNU6-174P-201ENST00000410406 106 ntBASIC1.88□□□□□ -2.11
SHROOM1Q2M3G4 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.88□□□□□ -2.11
SHROOM1Q2M3G4 USP9YP18-201ENST00000425912 695 ntBASIC1.88□□□□□ -2.11
SHROOM1Q2M3G4 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.88□□□□□ -2.11
SHROOM1Q2M3G4 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.88□□□□□ -2.11
SHROOM1Q2M3G4 RNU6-1037P-201ENST00000459571 107 ntBASIC1.88□□□□□ -2.11
SHROOM1Q2M3G4 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.88□□□□□ -2.11
SHROOM1Q2M3G4 Y_RNA.655-201ENST00000515919 96 ntBASIC1.88□□□□□ -2.11
SHROOM1Q2M3G4 Y_RNA.665-201ENST00000516177 98 ntBASIC1.88□□□□□ -2.11
SHROOM1Q2M3G4 RN7SKP256-201ENST00000517201 314 ntBASIC1.88□□□□□ -2.11
SHROOM1Q2M3G4 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.88□□□□□ -2.11
SHROOM1Q2M3G4 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.88□□□□□ -2.11
SHROOM1Q2M3G4 AL157687.1-201ENST00000554853 619 ntBASIC1.88□□□□□ -2.11
SHROOM1Q2M3G4 ZNF519P2-201ENST00000557032 169 ntBASIC1.88□□□□□ -2.11
SHROOM1Q2M3G4 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.88□□□□□ -2.11
SHROOM1Q2M3G4 AC010928.2-201ENST00000588017 287 ntBASIC1.88□□□□□ -2.11
SHROOM1Q2M3G4 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 142.1 ms