Protein–RNA interactions for Protein: Q16610

ECM1, Extracellular matrix protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1Q16610 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.06□□□□□ -1.76
ECM1Q16610 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ECM1Q16610 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC4.05□□□□□ -1.76
ECM1Q16610 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
ECM1Q16610 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
ECM1Q16610 SNORD9-201ENST00000362566 104 ntBASIC4.05□□□□□ -1.76
ECM1Q16610 RNU4-15P-201ENST00000362613 141 ntBASIC4.05□□□□□ -1.76
ECM1Q16610 RNA5SP42-201ENST00000364278 115 ntBASIC4.05□□□□□ -1.76
ECM1Q16610 SNORA14A-201ENST00000364773 135 ntBASIC4.05□□□□□ -1.76
ECM1Q16610 RNU6-283P-201ENST00000364788 107 ntBASIC4.05□□□□□ -1.76
ECM1Q16610 SNORA62.3-201ENST00000365110 153 ntBASIC4.05□□□□□ -1.76
ECM1Q16610 SNORA5A-201ENST00000384111 134 ntBASIC4.05□□□□□ -1.76
ECM1Q16610 RNU2-54P-201ENST00000410299 190 ntBASIC4.05□□□□□ -1.76
ECM1Q16610 GOT2P5-201ENST00000433995 546 ntBASIC4.05□□□□□ -1.76
ECM1Q16610 AC009237.7-201ENST00000447357 229 ntBASIC4.05□□□□□ -1.76
ECM1Q16610 AC010409.1-201ENST00000487382 476 ntBASIC4.05□□□□□ -1.76
ECM1Q16610 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC4.05□□□□□ -1.76
ECM1Q16610 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC4.05□□□□□ -1.76
ECM1Q16610 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC4.05□□□□□ -1.76
ECM1Q16610 RNU4-57P-201ENST00000515980 135 ntBASIC4.05□□□□□ -1.76
ECM1Q16610 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC4.05□□□□□ -1.76
ECM1Q16610 MIR4429-201ENST00000580105 73 ntBASIC4.05□□□□□ -1.76
ECM1Q16610 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.05□□□□□ -1.76
ECM1Q16610 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.05□□□□□ -1.76
ECM1Q16610 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC4.05□□□□□ -1.76
ECM1Q16610 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ECM1Q16610 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.05□□□□□ -1.76
ECM1Q16610 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ECM1Q16610 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.05□□□□□ -1.76
ECM1Q16610 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
ECM1Q16610 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.04□□□□□ -1.76
ECM1Q16610 Y_RNA.40-201ENST00000362645 93 ntBASIC4.04□□□□□ -1.76
ECM1Q16610 Y_RNA.127-201ENST00000363386 109 ntBASIC4.04□□□□□ -1.76
ECM1Q16610 Y_RNA.215-201ENST00000364204 112 ntBASIC4.04□□□□□ -1.76
ECM1Q16610 Y_RNA.218-201ENST00000364218 104 ntBASIC4.04□□□□□ -1.76
ECM1Q16610 PTMAP2-201ENST00000397627 327 ntBASIC4.04□□□□□ -1.76
ECM1Q16610 ATP5A1P2-201ENST00000412323 255 ntBASIC4.04□□□□□ -1.76
ECM1Q16610 ELOCP21-201ENST00000412558 336 ntBASIC4.04□□□□□ -1.76
ECM1Q16610 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.04□□□□□ -1.76
ECM1Q16610 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.04□□□□□ -1.76
ECM1Q16610 AC093663.1-201ENST00000497190 394 ntBASIC4.04□□□□□ -1.76
ECM1Q16610 AC104619.4-201ENST00000510773 249 ntBASIC4.04□□□□□ -1.76
ECM1Q16610 RNU2-44P-201ENST00000516795 194 ntBASIC4.04□□□□□ -1.76
ECM1Q16610 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC4.04□□□□□ -1.76
ECM1Q16610 AC068205.3-201ENST00000636385 468 ntBASIC4.04□□□□□ -1.76
ECM1Q16610 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.04□□□□□ -1.76
ECM1Q16610 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
ECM1Q16610 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
ECM1Q16610 RNU6-923P-201ENST00000364753 107 ntBASIC4.03□□□□□ -1.76
ECM1Q16610 RNU6-1289P-201ENST00000384431 106 ntBASIC4.03□□□□□ -1.76
ECM1Q16610 RNU6ATAC-201ENST00000408749 126 ntBASIC4.03□□□□□ -1.76
ECM1Q16610 AL133547.1-201ENST00000448546 220 ntBASIC4.03□□□□□ -1.76
ECM1Q16610 RPL23AP62-201ENST00000463396 453 ntBASIC4.03□□□□□ -1.76
ECM1Q16610 RPL23AP70-201ENST00000483361 460 ntBASIC4.03□□□□□ -1.76
ECM1Q16610 SRIP1-201ENST00000489235 288 ntBASIC4.03□□□□□ -1.76
ECM1Q16610 RNY3P16-201ENST00000516338 101 ntBASIC4.03□□□□□ -1.76
ECM1Q16610 AC103810.1-201ENST00000579873 453 ntBASIC4.03□□□□□ -1.76
ECM1Q16610 MIR3922-201ENST00000585192 84 ntBASIC4.03□□□□□ -1.76
ECM1Q16610 AC020914.4-201ENST00000597690 277 ntBASIC4.03□□□□□ -1.76
ECM1Q16610 AL359881.1-201ENST00000602916 267 ntBASIC4.03□□□□□ -1.76
ECM1Q16610 MIR92B-201ENST00000607575 96 ntBASIC4.03□□□□□ -1.76
ECM1Q16610 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
ECM1Q16610 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ECM1Q16610 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ECM1Q16610 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
ECM1Q16610 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ECM1Q16610 AP001486.2-201ENST00000561652 5113 ntBASIC4.03□□□□□ -1.77
ECM1Q16610 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
ECM1Q16610 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ECM1Q16610 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.02□□□□□ -1.77
ECM1Q16610 RNU6-486P-201ENST00000363116 107 ntBASIC4.02□□□□□ -1.77
ECM1Q16610 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
ECM1Q16610 Z98742.2-201ENST00000431564 187 ntBASIC4.02□□□□□ -1.77
ECM1Q16610 MRPS10P1-201ENST00000448483 130 ntBASIC4.02□□□□□ -1.77
ECM1Q16610 AC074290.1-201ENST00000448883 135 ntBASIC4.02□□□□□ -1.77
ECM1Q16610 AC016925.1-201ENST00000458303 298 ntBASIC4.02□□□□□ -1.77
ECM1Q16610 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC4.02□□□□□ -1.77
ECM1Q16610 MIR3684-201ENST00000579779 74 ntBASIC4.02□□□□□ -1.77
ECM1Q16610 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC4.02□□□□□ -1.77
ECM1Q16610 AL137843.1-201ENST00000605078 385 ntBASIC4.02□□□□□ -1.77
ECM1Q16610 AC091932.3-201ENST00000624223 323 ntBASIC4.02□□□□□ -1.77
ECM1Q16610 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
ECM1Q16610 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
ECM1Q16610 AC135776.4-201ENST00000624300 1904 ntBASIC4.01□□□□□ -1.77
ECM1Q16610 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.01□□□□□ -1.77
ECM1Q16610 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
ECM1Q16610 MIR591-201ENST00000385290 95 ntBASIC4.01□□□□□ -1.77
ECM1Q16610 RNU2-52P-201ENST00000410680 190 ntBASIC4.01□□□□□ -1.77
ECM1Q16610 AC009963.1-201ENST00000417265 157 ntBASIC4.01□□□□□ -1.77
ECM1Q16610 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.01□□□□□ -1.77
ECM1Q16610 TOMM22P2-201ENST00000430735 237 ntBASIC4.01□□□□□ -1.77
ECM1Q16610 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.01□□□□□ -1.77
ECM1Q16610 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC4.01□□□□□ -1.77
ECM1Q16610 RNU6-426P-201ENST00000516464 97 ntBASIC4.01□□□□□ -1.77
ECM1Q16610 RNU6-579P-201ENST00000516879 102 ntBASIC4.01□□□□□ -1.77
ECM1Q16610 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC4.01□□□□□ -1.77
ECM1Q16610 AC009093.8-201ENST00000641769 292 ntBASIC4.01□□□□□ -1.77
ECM1Q16610 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.01□□□□□ -1.77
ECM1Q16610 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.01□□□□□ -1.77
ECM1Q16610 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms