Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 RPL36AP21-201ENST00000490372 323 ntBASIC1.45□□□□□ -2.18
CBX1P83916 AC114801.2-201ENST00000503825 781 ntBASIC1.45□□□□□ -2.18
CBX1P83916 AC087854.1-201ENST00000519706 414 ntBASIC1.45□□□□□ -2.18
CBX1P83916 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.45□□□□□ -2.18
CBX1P83916 AC006026.1-201ENST00000444025 1803 ntBASIC1.45□□□□□ -2.18
CBX1P83916 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CBX1P83916 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
CBX1P83916 RNU6-862P-201ENST00000362804 105 ntBASIC1.44□□□□□ -2.18
CBX1P83916 RNU6-877P-201ENST00000383868 107 ntBASIC1.44□□□□□ -2.18
CBX1P83916 MIR758-201ENST00000390227 88 ntBASIC1.44□□□□□ -2.18
CBX1P83916 SNORD37.1-201ENST00000390968 65 ntBASIC1.44□□□□□ -2.18
CBX1P83916 RNU1-78P-201ENST00000391248 165 ntBASIC1.44□□□□□ -2.18
CBX1P83916 SNORA11.2-201ENST00000408318 127 ntBASIC1.44□□□□□ -2.18
CBX1P83916 RNU2-7P-201ENST00000410794 178 ntBASIC1.44□□□□□ -2.18
CBX1P83916 AL606489.2-201ENST00000433886 234 ntBASIC1.44□□□□□ -2.18
CBX1P83916 HSPE1P9-201ENST00000440046 311 ntBASIC1.44□□□□□ -2.18
CBX1P83916 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.44□□□□□ -2.18
CBX1P83916 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.44□□□□□ -2.18
CBX1P83916 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.44□□□□□ -2.18
CBX1P83916 snoU13.6-201ENST00000458785 104 ntBASIC1.44□□□□□ -2.18
CBX1P83916 MTCO3P38-201ENST00000468910 766 ntBASIC1.44□□□□□ -2.18
CBX1P83916 RPL26P26-201ENST00000480251 434 ntBASIC1.44□□□□□ -2.18
CBX1P83916 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.44□□□□□ -2.18
CBX1P83916 RNU6-323P-201ENST00000521915 107 ntBASIC1.44□□□□□ -2.18
CBX1P83916 AC090821.2-201ENST00000523552 176 ntBASIC1.44□□□□□ -2.18
CBX1P83916 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
CBX1P83916 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.44□□□□□ -2.18
CBX1P83916 AP003034.1-201ENST00000534621 422 ntBASIC1.44□□□□□ -2.18
CBX1P83916 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.44□□□□□ -2.18
CBX1P83916 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.44□□□□□ -2.18
CBX1P83916 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.44□□□□□ -2.18
CBX1P83916 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.44□□□□□ -2.18
CBX1P83916 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.44□□□□□ -2.18
CBX1P83916 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
CBX1P83916 AC010615.1-201ENST00000594254 1764 ntBASIC1.44□□□□□ -2.18
CBX1P83916 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
CBX1P83916 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
CBX1P83916 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
CBX1P83916 RNU6-545P-201ENST00000362681 104 ntBASIC1.43□□□□□ -2.18
CBX1P83916 RNU6-562P-201ENST00000362731 107 ntBASIC1.43□□□□□ -2.18
CBX1P83916 RNU6-82P-201ENST00000363970 107 ntBASIC1.43□□□□□ -2.18
CBX1P83916 RNU6-360P-201ENST00000390944 104 ntBASIC1.43□□□□□ -2.18
CBX1P83916 MIR1323-201ENST00000408090 73 ntBASIC1.43□□□□□ -2.18
CBX1P83916 ARL5AP1-201ENST00000418991 388 ntBASIC1.43□□□□□ -2.18
CBX1P83916 AL513185.2-201ENST00000425543 193 ntBASIC1.43□□□□□ -2.18
CBX1P83916 C8orf59P1-201ENST00000429930 303 ntBASIC1.43□□□□□ -2.18
CBX1P83916 FTH1P12-201ENST00000432137 551 ntBASIC1.43□□□□□ -2.18
CBX1P83916 AC245047.4-201ENST00000433189 144 ntBASIC1.43□□□□□ -2.18
CBX1P83916 JTBP1-201ENST00000441314 247 ntBASIC1.43□□□□□ -2.18
CBX1P83916 snoU13.30-201ENST00000458951 104 ntBASIC1.43□□□□□ -2.18
CBX1P83916 U8.21-201ENST00000459536 136 ntBASIC1.43□□□□□ -2.18
CBX1P83916 RPS29P27-201ENST00000463711 170 ntBASIC1.43□□□□□ -2.18
CBX1P83916 RN7SL429P-201ENST00000479090 223 ntBASIC1.43□□□□□ -2.18
CBX1P83916 RN7SL489P-201ENST00000486185 223 ntBASIC1.43□□□□□ -2.18
CBX1P83916 RN7SL327P-201ENST00000488659 223 ntBASIC1.43□□□□□ -2.18
CBX1P83916 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.43□□□□□ -2.18
CBX1P83916 AC108078.1-201ENST00000508073 725 ntBASIC1.43□□□□□ -2.18
CBX1P83916 AC079140.3-201ENST00000511111 550 ntBASIC1.43□□□□□ -2.18
CBX1P83916 AC025465.4-201ENST00000513422 638 ntBASIC1.43□□□□□ -2.18
CBX1P83916 SNORA40.12-201ENST00000516329 111 ntBASIC1.43□□□□□ -2.18
CBX1P83916 CENPUP1-201ENST00000526649 1202 ntBASIC1.43□□□□□ -2.18
CBX1P83916 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.43□□□□□ -2.18
CBX1P83916 AC027807.1-201ENST00000559921 996 ntBASIC1.43□□□□□ -2.18
CBX1P83916 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.43□□□□□ -2.18
CBX1P83916 SNORA77B-201ENST00000578179 125 ntBASIC1.43□□□□□ -2.18
CBX1P83916 SNORA59B-202ENST00000578183 701 ntBASIC1.43□□□□□ -2.18
CBX1P83916 AL158827.2-201ENST00000602494 330 ntBASIC1.43□□□□□ -2.18
CBX1P83916 RN7SL853P-201ENST00000617250 223 ntBASIC1.43□□□□□ -2.18
CBX1P83916 AC103705.1-201ENST00000619013 241 ntBASIC1.43□□□□□ -2.18
CBX1P83916 AL691447.3-201ENST00000635020 330 ntBASIC1.43□□□□□ -2.18
CBX1P83916 ELL2P3-201ENST00000457883 1602 ntBASIC1.42□□□□□ -2.18
CBX1P83916 RNU1-96P-201ENST00000364163 162 ntBASIC1.42□□□□□ -2.18
CBX1P83916 RNU6-1019P-201ENST00000364424 107 ntBASIC1.42□□□□□ -2.18
CBX1P83916 MIR300-201ENST00000401138 83 ntBASIC1.42□□□□□ -2.18
CBX1P83916 MTND3P9-201ENST00000429526 346 ntBASIC1.42□□□□□ -2.18
CBX1P83916 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.42□□□□□ -2.18
CBX1P83916 AC010095.1-201ENST00000443543 144 ntBASIC1.42□□□□□ -2.18
CBX1P83916 AMD1P1-201ENST00000457220 922 ntBASIC1.42□□□□□ -2.18
CBX1P83916 UBL5P3-201ENST00000475112 231 ntBASIC1.42□□□□□ -2.18
CBX1P83916 AC091435.1-201ENST00000505442 584 ntBASIC1.42□□□□□ -2.18
CBX1P83916 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.42□□□□□ -2.18
CBX1P83916 RN7SKP179-201ENST00000516126 217 ntBASIC1.42□□□□□ -2.18
CBX1P83916 RNU6-1041P-201ENST00000516254 102 ntBASIC1.42□□□□□ -2.18
CBX1P83916 RNU6-250P-201ENST00000516958 103 ntBASIC1.42□□□□□ -2.18
CBX1P83916 RNU6-856P-201ENST00000516959 98 ntBASIC1.42□□□□□ -2.18
CBX1P83916 RNA5SP437-201ENST00000517249 129 ntBASIC1.42□□□□□ -2.18
CBX1P83916 DEFB131C-201ENST00000528817 165 ntBASIC1.42□□□□□ -2.18
CBX1P83916 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.42□□□□□ -2.18
CBX1P83916 AC119751.7-201ENST00000600494 245 ntBASIC1.42□□□□□ -2.18
CBX1P83916 AC092747.3-201ENST00000603769 301 ntBASIC1.42□□□□□ -2.18
CBX1P83916 CTHRC1P1-201ENST00000605383 469 ntBASIC1.42□□□□□ -2.18
CBX1P83916 BX248123.2-201ENST00000606318 124 ntBASIC1.42□□□□□ -2.18
CBX1P83916 AC064836.2-201ENST00000609491 462 ntBASIC1.42□□□□□ -2.18
CBX1P83916 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
CBX1P83916 RNU6-271P-201ENST00000363858 105 ntBASIC1.41□□□□□ -2.18
CBX1P83916 SNORA29-201ENST00000384183 140 ntBASIC1.41□□□□□ -2.18
CBX1P83916 Y_RNA.553-201ENST00000384670 102 ntBASIC1.41□□□□□ -2.18
CBX1P83916 RNU4-55P-201ENST00000410731 137 ntBASIC1.41□□□□□ -2.18
CBX1P83916 MTCO1P19-201ENST00000443487 500 ntBASIC1.41□□□□□ -2.18
CBX1P83916 AC007677.1-201ENST00000445757 515 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms