Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 MIR1248-201ENST00000629190 106 ntBASIC-0.22□□□□□ -2.44
PRKDCP78527 RNA5SP264-201ENST00000363115 107 ntBASIC-0.22□□□□□ -2.44
PRKDCP78527 RNU6-658P-201ENST00000384606 106 ntBASIC-0.22□□□□□ -2.44
PRKDCP78527 MTATP6P27-201ENST00000416987 621 ntBASIC-0.22□□□□□ -2.44
PRKDCP78527 AC109810.1-201ENST00000534066 224 ntBASIC-0.22□□□□□ -2.44
PRKDCP78527 AC092325.1-201ENST00000566449 554 ntBASIC-0.22□□□□□ -2.44
PRKDCP78527 AC095057.3-201ENST00000567102 1157 ntBASIC-0.22□□□□□ -2.44
PRKDCP78527 AC104695.3-201ENST00000604052 296 ntBASIC-0.22□□□□□ -2.44
PRKDCP78527 RNU6-1010P-201ENST00000362757 107 ntBASIC-0.22□□□□□ -2.45
PRKDCP78527 MIR196A2-201ENST00000385189 110 ntBASIC-0.22□□□□□ -2.45
PRKDCP78527 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC-0.22□□□□□ -2.45
PRKDCP78527 BX664727.1-201ENST00000416024 466 ntBASIC-0.22□□□□□ -2.45
PRKDCP78527 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.22□□□□□ -2.45
PRKDCP78527 RPS26P48-201ENST00000491713 339 ntBASIC-0.22□□□□□ -2.45
PRKDCP78527 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC-0.22□□□□□ -2.45
PRKDCP78527 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC-0.22□□□□□ -2.45
PRKDCP78527 AC005176.2-201ENST00000596933 147 ntBASIC-0.22□□□□□ -2.45
PRKDCP78527 PRELID3BP2-201ENST00000605362 201 ntBASIC-0.22□□□□□ -2.45
PRKDCP78527 CBX3P9-201ENST00000402326 552 ntBASIC-0.23□□□□□ -2.45
PRKDCP78527 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC-0.23□□□□□ -2.45
PRKDCP78527 MTCO3P17-201ENST00000443775 513 ntBASIC-0.23□□□□□ -2.45
PRKDCP78527 RNU6-416P-201ENST00000516265 103 ntBASIC-0.23□□□□□ -2.45
PRKDCP78527 RNU6-917P-201ENST00000516294 104 ntBASIC-0.23□□□□□ -2.45
PRKDCP78527 RNU6-143P-201ENST00000516942 93 ntBASIC-0.23□□□□□ -2.45
PRKDCP78527 RNU4-56P-201ENST00000364700 142 ntBASIC-0.23□□□□□ -2.45
PRKDCP78527 Y_RNA.428-201ENST00000384078 102 ntBASIC-0.23□□□□□ -2.45
PRKDCP78527 AL353777.1-201ENST00000425552 326 ntBASIC-0.23□□□□□ -2.45
PRKDCP78527 HMGB1P28-201ENST00000507778 552 ntBASIC-0.23□□□□□ -2.45
PRKDCP78527 AC009646.1-201ENST00000510455 318 ntBASIC-0.23□□□□□ -2.45
PRKDCP78527 SCARNA17-201ENST00000516183 144 ntBASIC-0.23□□□□□ -2.45
PRKDCP78527 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.23□□□□□ -2.45
PRKDCP78527 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC-0.23□□□□□ -2.45
PRKDCP78527 AC004009.2-201ENST00000623016 728 ntBASIC-0.23□□□□□ -2.45
PRKDCP78527 U6.101-201ENST00000637707 76 ntBASIC-0.23□□□□□ -2.45
PRKDCP78527 SNORA63D-201ENST00000364359 132 ntBASIC-0.23□□□□□ -2.45
PRKDCP78527 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC-0.23□□□□□ -2.45
PRKDCP78527 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.23□□□□□ -2.45
PRKDCP78527 SNRPEP8-201ENST00000442866 260 ntBASIC-0.23□□□□□ -2.45
PRKDCP78527 AC245047.8-201ENST00000456455 284 ntBASIC-0.23□□□□□ -2.45
PRKDCP78527 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.23□□□□□ -2.45
PRKDCP78527 UTP23-205ENST00000520733 369 ntTSL 3 BASIC-0.23□□□□□ -2.45
PRKDCP78527 AC022022.2-201ENST00000602989 360 ntBASIC-0.23□□□□□ -2.45
PRKDCP78527 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC-0.23□□□□□ -2.45
PRKDCP78527 RNU6-1123P-201ENST00000362347 106 ntBASIC-0.23□□□□□ -2.45
PRKDCP78527 RNU6-512P-201ENST00000364438 103 ntBASIC-0.23□□□□□ -2.45
PRKDCP78527 RNU4-22P-201ENST00000411058 166 ntBASIC-0.23□□□□□ -2.45
PRKDCP78527 RNU6-177P-201ENST00000411257 104 ntBASIC-0.23□□□□□ -2.45
PRKDCP78527 AL590632.1-201ENST00000424289 371 ntBASIC-0.23□□□□□ -2.45
PRKDCP78527 AC092427.1-201ENST00000439177 601 ntBASIC-0.23□□□□□ -2.45
PRKDCP78527 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC-0.23□□□□□ -2.45
PRKDCP78527 OFD1P7Y-201ENST00000454643 1155 ntBASIC-0.23□□□□□ -2.45
PRKDCP78527 AC069113.3-201ENST00000521019 150 ntBASIC-0.23□□□□□ -2.45
PRKDCP78527 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.23□□□□□ -2.45
PRKDCP78527 AL162424.1-201ENST00000602325 221 ntBASIC-0.23□□□□□ -2.45
PRKDCP78527 AC011451.2-201ENST00000604303 598 ntBASIC-0.23□□□□□ -2.45
PRKDCP78527 AC092656.1-203ENST00000624134 423 ntBASIC-0.23□□□□□ -2.45
PRKDCP78527 AC019226.1-201ENST00000625666 515 ntBASIC-0.23□□□□□ -2.45
PRKDCP78527 RNU6-1339P-201ENST00000363574 91 ntBASIC-0.24□□□□□ -2.45
PRKDCP78527 MTND1P9-201ENST00000453775 944 ntBASIC-0.24□□□□□ -2.45
PRKDCP78527 AC112206.4-201ENST00000515142 405 ntBASIC-0.24□□□□□ -2.45
PRKDCP78527 MRPS36P4-201ENST00000534436 298 ntBASIC-0.24□□□□□ -2.45
PRKDCP78527 AK6P2-201ENST00000549020 471 ntBASIC-0.24□□□□□ -2.45
PRKDCP78527 AL355073.2-201ENST00000612106 557 ntBASIC-0.24□□□□□ -2.45
PRKDCP78527 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC-0.24□□□□□ -2.45
PRKDCP78527 AC009032.1-201ENST00000617574 431 ntBASIC-0.24□□□□□ -2.45
PRKDCP78527 MTND4P5-201ENST00000435821 1374 ntBASIC-0.24□□□□□ -2.45
PRKDCP78527 RNU6-1335P-201ENST00000365426 107 ntBASIC-0.24□□□□□ -2.45
PRKDCP78527 RNU6-505P-201ENST00000384427 107 ntBASIC-0.24□□□□□ -2.45
PRKDCP78527 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC-0.24□□□□□ -2.45
PRKDCP78527 SNORD75.1-201ENST00000408373 60 ntBASIC-0.24□□□□□ -2.45
PRKDCP78527 GTF2IP3-201ENST00000433887 494 ntBASIC-0.24□□□□□ -2.45
PRKDCP78527 AC092170.1-201ENST00000440211 356 ntBASIC-0.24□□□□□ -2.45
PRKDCP78527 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC-0.24□□□□□ -2.45
PRKDCP78527 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC-0.24□□□□□ -2.45
PRKDCP78527 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC-0.24□□□□□ -2.45
PRKDCP78527 AC024940.5-201ENST00000622889 474 ntBASIC-0.24□□□□□ -2.45
PRKDCP78527 ENSAP3-201ENST00000312710 333 ntBASIC-0.24□□□□□ -2.45
PRKDCP78527 SNORA12.1-201ENST00000390873 148 ntBASIC-0.24□□□□□ -2.45
PRKDCP78527 Y_RNA.623-201ENST00000411128 95 ntBASIC-0.24□□□□□ -2.45
PRKDCP78527 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC-0.24□□□□□ -2.45
PRKDCP78527 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC-0.24□□□□□ -2.45
PRKDCP78527 AC005345.1-201ENST00000431868 217 ntBASIC-0.24□□□□□ -2.45
PRKDCP78527 AC002486.1-201ENST00000435098 391 ntBASIC-0.24□□□□□ -2.45
PRKDCP78527 RNU6-678P-201ENST00000516832 109 ntBASIC-0.24□□□□□ -2.45
PRKDCP78527 MIR4441-201ENST00000582623 100 ntBASIC-0.24□□□□□ -2.45
PRKDCP78527 CTHRC1P1-201ENST00000605383 469 ntBASIC-0.24□□□□□ -2.45
PRKDCP78527 TUG1_2.1-201ENST00000614234 87 ntBASIC-0.24□□□□□ -2.45
PRKDCP78527 AC008147.4-201ENST00000617570 1204 ntBASIC-0.24□□□□□ -2.45
PRKDCP78527 AL031667.3-201ENST00000620124 655 ntBASIC-0.24□□□□□ -2.45
PRKDCP78527 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC-0.24□□□□□ -2.45
PRKDCP78527 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.25□□□□□ -2.45
PRKDCP78527 RNU6-843P-201ENST00000384454 104 ntBASIC-0.25□□□□□ -2.45
PRKDCP78527 RNU6-114P-201ENST00000384704 105 ntBASIC-0.25□□□□□ -2.45
PRKDCP78527 MIR643-201ENST00000385267 97 ntBASIC-0.25□□□□□ -2.45
PRKDCP78527 RNA5SP461-201ENST00000516451 104 ntBASIC-0.25□□□□□ -2.45
PRKDCP78527 RNA5SP268-201ENST00000516828 124 ntBASIC-0.25□□□□□ -2.45
PRKDCP78527 AC018462.2-201ENST00000605375 395 ntBASIC-0.25□□□□□ -2.45
PRKDCP78527 SGO1P1-201ENST00000603525 1447 ntBASIC-0.25□□□□□ -2.45
PRKDCP78527 RNU6-701P-201ENST00000384059 107 ntBASIC-0.25□□□□□ -2.45
PRKDCP78527 RNU6-331P-201ENST00000384724 107 ntBASIC-0.25□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms