Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.03□□□□□ -2.4
LSM3P62310 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.03□□□□□ -2.4
LSM3P62310 RPL39P39-201ENST00000455840 151 ntBASIC0.03□□□□□ -2.4
LSM3P62310 AC245047.8-201ENST00000456455 284 ntBASIC0.03□□□□□ -2.4
LSM3P62310 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.03□□□□□ -2.4
LSM3P62310 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.03□□□□□ -2.4
LSM3P62310 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.03□□□□□ -2.4
LSM3P62310 AC087854.1-201ENST00000519706 414 ntBASIC0.03□□□□□ -2.4
LSM3P62310 AC090049.2-201ENST00000550377 109 ntBASIC0.03□□□□□ -2.4
LSM3P62310 AC073539.2-201ENST00000597113 165 ntBASIC0.03□□□□□ -2.4
LSM3P62310 AL513423.1-201ENST00000621695 132 ntBASIC0.03□□□□□ -2.4
LSM3P62310 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC0.03□□□□□ -2.4
LSM3P62310 AL450472.1-202ENST00000637286 180 ntBASIC0.03□□□□□ -2.4
LSM3P62310 AL163152.1-201ENST00000642001 374 ntBASIC0.03□□□□□ -2.4
LSM3P62310 RNU6-1327P-201ENST00000365302 105 ntBASIC0.02□□□□□ -2.41
LSM3P62310 MRPS18CP6-201ENST00000423587 223 ntBASIC0.02□□□□□ -2.41
LSM3P62310 AC007283.2-201ENST00000424739 197 ntBASIC0.02□□□□□ -2.41
LSM3P62310 RPL23AP50-201ENST00000434149 455 ntBASIC0.02□□□□□ -2.41
LSM3P62310 AL162725.1-201ENST00000435405 301 ntBASIC0.02□□□□□ -2.41
LSM3P62310 NFU1P2-201ENST00000448700 469 ntBASIC0.02□□□□□ -2.41
LSM3P62310 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.02□□□□□ -2.41
LSM3P62310 AC107934.1-201ENST00000522215 217 ntBASIC0.02□□□□□ -2.41
LSM3P62310 ADI1P3-201ENST00000549509 470 ntBASIC0.02□□□□□ -2.41
LSM3P62310 AC025627.3-201ENST00000582078 182 ntBASIC0.02□□□□□ -2.41
LSM3P62310 AC104458.1-201ENST00000608243 463 ntBASIC0.02□□□□□ -2.41
LSM3P62310 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC0.02□□□□□ -2.41
LSM3P62310 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.02□□□□□ -2.41
LSM3P62310 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.02□□□□□ -2.41
LSM3P62310 AL356596.1-201ENST00000624230 379 ntBASIC0.02□□□□□ -2.41
LSM3P62310 RNU6-199P-201ENST00000362954 107 ntBASIC0.01□□□□□ -2.41
LSM3P62310 SNORD44.1-201ENST00000363202 61 ntBASIC0.01□□□□□ -2.41
LSM3P62310 RNU4-56P-201ENST00000364700 142 ntBASIC0.01□□□□□ -2.41
LSM3P62310 SNORD32A-201ENST00000364805 84 ntBASIC0.01□□□□□ -2.41
LSM3P62310 MIR140-201ENST00000385282 100 ntBASIC0.01□□□□□ -2.41
LSM3P62310 RNU6-440P-201ENST00000390882 105 ntBASIC0.01□□□□□ -2.41
LSM3P62310 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.01□□□□□ -2.41
LSM3P62310 AL451046.2-201ENST00000403074 277 ntBASIC0.01□□□□□ -2.41
LSM3P62310 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.01□□□□□ -2.41
LSM3P62310 MIR1283-1-201ENST00000408494 87 ntBASIC0.01□□□□□ -2.41
LSM3P62310 RNU2-3P-201ENST00000410144 191 ntBASIC0.01□□□□□ -2.41
LSM3P62310 RN7SKP200-201ENST00000410564 320 ntBASIC0.01□□□□□ -2.41
LSM3P62310 AL445305.1-201ENST00000432577 575 ntBASIC0.01□□□□□ -2.41
LSM3P62310 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.01□□□□□ -2.41
LSM3P62310 RBBP4P6-201ENST00000508098 202 ntBASIC0.01□□□□□ -2.41
LSM3P62310 AC079395.1-201ENST00000510981 262 ntBASIC0.01□□□□□ -2.41
LSM3P62310 AC091874.1-201ENST00000511402 339 ntBASIC0.01□□□□□ -2.41
LSM3P62310 MTCO3P27-201ENST00000514397 196 ntBASIC0.01□□□□□ -2.41
LSM3P62310 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.01□□□□□ -2.41
LSM3P62310 AC109810.1-201ENST00000534066 224 ntBASIC0.01□□□□□ -2.41
LSM3P62310 SUB1P2-201ENST00000556401 297 ntBASIC0.01□□□□□ -2.41
LSM3P62310 Z99497.2-201ENST00000603634 310 ntBASIC0.01□□□□□ -2.41
LSM3P62310 RAC1P9-201ENST00000604990 392 ntBASIC0.01□□□□□ -2.41
LSM3P62310 LARP7P1-201ENST00000605576 316 ntBASIC0.01□□□□□ -2.41
LSM3P62310 RNU6-94P-201ENST00000607728 107 ntBASIC0.01□□□□□ -2.41
LSM3P62310 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.01□□□□□ -2.41
LSM3P62310 RNU6-552P-201ENST00000362869 119 ntBASIC0□□□□□ -2.41
LSM3P62310 RNU6-428P-201ENST00000362942 107 ntBASIC0□□□□□ -2.41
LSM3P62310 RNU6-336P-201ENST00000364891 107 ntBASIC0□□□□□ -2.41
LSM3P62310 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0□□□□□ -2.41
LSM3P62310 RPS20P2-201ENST00000402520 389 ntBASIC0□□□□□ -2.41
LSM3P62310 MTND3P20-201ENST00000407663 186 ntBASIC0□□□□□ -2.41
LSM3P62310 AL442644.1-201ENST00000454390 3105 ntBASIC0□□□□□ -2.41
LSM3P62310 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC0□□□□□ -2.41
LSM3P62310 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0□□□□□ -2.41
LSM3P62310 SNORA70.12-201ENST00000516084 153 ntBASIC0□□□□□ -2.41
LSM3P62310 RNU2-10P-201ENST00000516375 211 ntBASIC0□□□□□ -2.41
LSM3P62310 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0□□□□□ -2.41
LSM3P62310 AC136443.5-201ENST00000603741 370 ntBASIC0□□□□□ -2.41
LSM3P62310 AC009994.1-201ENST00000606889 253 ntBASIC0□□□□□ -2.41
LSM3P62310 AL391903.3-201ENST00000612158 163 ntBASIC0□□□□□ -2.41
LSM3P62310 AC073349.3-201ENST00000617616 186 ntBASIC0□□□□□ -2.41
LSM3P62310 Z69720.2-201ENST00000624755 279 ntBASIC0□□□□□ -2.41
LSM3P62310 AL157786.1-207ENST00000627771 695 ntBASIC0□□□□□ -2.41
LSM3P62310 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
LSM3P62310 AP000568.1-201ENST00000282964 442 ntBASIC-0.01□□□□□ -2.41
LSM3P62310 RNU6-37P-201ENST00000362692 107 ntBASIC-0.01□□□□□ -2.41
LSM3P62310 RNU6-433P-201ENST00000363216 104 ntBASIC-0.01□□□□□ -2.41
LSM3P62310 RNU6-560P-201ENST00000364007 108 ntBASIC-0.01□□□□□ -2.41
LSM3P62310 RNU6-11P-201ENST00000364234 107 ntBASIC-0.01□□□□□ -2.41
LSM3P62310 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
LSM3P62310 RNU6-25P-201ENST00000383873 107 ntBASIC-0.01□□□□□ -2.41
LSM3P62310 RNU6-1-201ENST00000383898 107 ntBASIC-0.01□□□□□ -2.41
LSM3P62310 RNU6-48P-201ENST00000384161 107 ntBASIC-0.01□□□□□ -2.41
LSM3P62310 RNU6-36P-201ENST00000384172 107 ntBASIC-0.01□□□□□ -2.41
LSM3P62310 RNU6-4P-201ENST00000384205 107 ntBASIC-0.01□□□□□ -2.41
LSM3P62310 RNU6-5P-201ENST00000384238 107 ntBASIC-0.01□□□□□ -2.41
LSM3P62310 RNU6-3P-201ENST00000384314 107 ntBASIC-0.01□□□□□ -2.41
LSM3P62310 RNU6-15P-201ENST00000384534 107 ntBASIC-0.01□□□□□ -2.41
LSM3P62310 RNU6-2-201ENST00000384627 107 ntBASIC-0.01□□□□□ -2.41
LSM3P62310 RNU6-29P-201ENST00000384637 107 ntBASIC-0.01□□□□□ -2.41
LSM3P62310 RNU6-9-201ENST00000384776 107 ntBASIC-0.01□□□□□ -2.41
LSM3P62310 RNU6-33P-201ENST00000384793 107 ntBASIC-0.01□□□□□ -2.41
LSM3P62310 MIR549A-201ENST00000385268 96 ntBASIC-0.01□□□□□ -2.41
LSM3P62310 SNORA26.3-201ENST00000391119 136 ntBASIC-0.01□□□□□ -2.41
LSM3P62310 MIR208B-201ENST00000401172 77 ntBASIC-0.01□□□□□ -2.41
LSM3P62310 RNU6-321P-201ENST00000410912 106 ntBASIC-0.01□□□□□ -2.41
LSM3P62310 AC245047.3-201ENST00000429428 127 ntBASIC-0.01□□□□□ -2.41
LSM3P62310 AC002486.1-201ENST00000435098 391 ntBASIC-0.01□□□□□ -2.41
LSM3P62310 AC104332.1-201ENST00000440471 797 ntBASIC-0.01□□□□□ -2.41
LSM3P62310 AC024995.1-201ENST00000523014 93 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms