Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 AC110588.1-201ENST00000559699 137 ntBASIC3.07□□□□□ -1.92
PER3P56645 AC078899.3-201ENST00000599065 212 ntBASIC3.07□□□□□ -1.92
PER3P56645 AL133393.1-201ENST00000603277 287 ntBASIC3.07□□□□□ -1.92
PER3P56645 AL138963.2-201ENST00000605137 226 ntBASIC3.07□□□□□ -1.92
PER3P56645 MIR7106-201ENST00000612419 65 ntBASIC3.07□□□□□ -1.92
PER3P56645 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
PER3P56645 AC008264.2-201ENST00000610193 3731 ntBASIC3.07□□□□□ -1.92
PER3P56645 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PER3P56645 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
PER3P56645 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
PER3P56645 MIR422A-201ENST00000362286 90 ntBASIC3.06□□□□□ -1.92
PER3P56645 RNU6-1210P-201ENST00000363775 107 ntBASIC3.06□□□□□ -1.92
PER3P56645 RNU6-873P-201ENST00000363833 107 ntBASIC3.06□□□□□ -1.92
PER3P56645 RNU6-926P-201ENST00000384075 107 ntBASIC3.06□□□□□ -1.92
PER3P56645 Y_RNA.439-201ENST00000384119 94 ntBASIC3.06□□□□□ -1.92
PER3P56645 RNU6-1145P-201ENST00000384246 107 ntBASIC3.06□□□□□ -1.92
PER3P56645 Y_RNA.461-201ENST00000384263 103 ntBASIC3.06□□□□□ -1.92
PER3P56645 RNU6-713P-201ENST00000384761 107 ntBASIC3.06□□□□□ -1.92
PER3P56645 RNU6-1093P-201ENST00000391194 107 ntBASIC3.06□□□□□ -1.92
PER3P56645 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
PER3P56645 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.06□□□□□ -1.92
PER3P56645 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.06□□□□□ -1.92
PER3P56645 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.06□□□□□ -1.92
PER3P56645 RN7SKP49-201ENST00000516675 260 ntBASIC3.06□□□□□ -1.92
PER3P56645 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.06□□□□□ -1.92
PER3P56645 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.06□□□□□ -1.92
PER3P56645 MIR3923-201ENST00000579521 83 ntBASIC3.06□□□□□ -1.92
PER3P56645 PCGEM1.1-201ENST00000613431 131 ntBASIC3.06□□□□□ -1.92
PER3P56645 AC022149.2-201ENST00000621061 203 ntBASIC3.06□□□□□ -1.92
PER3P56645 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.06□□□□□ -1.92
PER3P56645 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.06□□□□□ -1.92
PER3P56645 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
PER3P56645 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
PER3P56645 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.06□□□□□ -1.92
PER3P56645 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.05□□□□□ -1.92
PER3P56645 AC068647.1-201ENST00000489539 2265 ntBASIC3.05□□□□□ -1.92
PER3P56645 AL359854.1-201ENST00000614203 1594 ntBASIC3.05□□□□□ -1.92
PER3P56645 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PER3P56645 RNU6-655P-201ENST00000362858 107 ntBASIC3.05□□□□□ -1.92
PER3P56645 Y_RNA.143-201ENST00000363520 106 ntBASIC3.05□□□□□ -1.92
PER3P56645 MIR215-201ENST00000384858 110 ntBASIC3.05□□□□□ -1.92
PER3P56645 MT-TG-201ENST00000387429 68 ntBASIC3.05□□□□□ -1.92
PER3P56645 SNORD115-46-201ENST00000390982 71 ntBASIC3.05□□□□□ -1.92
PER3P56645 MIR208B-201ENST00000401172 77 ntBASIC3.05□□□□□ -1.92
PER3P56645 MRPL35P1-201ENST00000404272 572 ntBASIC3.05□□□□□ -1.92
PER3P56645 SNORD12B-201ENST00000410433 91 ntBASIC3.05□□□□□ -1.92
PER3P56645 RNU6-1328P-201ENST00000410938 106 ntBASIC3.05□□□□□ -1.92
PER3P56645 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.05□□□□□ -1.92
PER3P56645 AC097463.2-201ENST00000421074 142 ntBASIC3.05□□□□□ -1.92
PER3P56645 CBX3P6-201ENST00000430257 527 ntBASIC3.05□□□□□ -1.92
PER3P56645 AC109925.1-201ENST00000478069 331 ntBASIC3.05□□□□□ -1.92
PER3P56645 RPL26P26-201ENST00000480251 434 ntBASIC3.05□□□□□ -1.92
PER3P56645 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.05□□□□□ -1.92
PER3P56645 RNA5SP385-201ENST00000515947 110 ntBASIC3.05□□□□□ -1.92
PER3P56645 RNU2-53P-201ENST00000516257 147 ntBASIC3.05□□□□□ -1.92
PER3P56645 RNA5SP54-201ENST00000516951 92 ntBASIC3.05□□□□□ -1.92
PER3P56645 IGKV2-26-201ENST00000518305 343 ntBASIC3.05□□□□□ -1.92
PER3P56645 AC023157.2-201ENST00000540596 141 ntBASIC3.05□□□□□ -1.92
PER3P56645 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.05□□□□□ -1.92
PER3P56645 MIR4506-201ENST00000584693 77 ntBASIC3.05□□□□□ -1.92
PER3P56645 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.05□□□□□ -1.92
PER3P56645 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.05□□□□□ -1.92
PER3P56645 AC073657.2-201ENST00000605661 303 ntBASIC3.05□□□□□ -1.92
PER3P56645 AC062037.2-201ENST00000610137 73 ntBASIC3.05□□□□□ -1.92
PER3P56645 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.05□□□□□ -1.92
PER3P56645 BX322639.1-202ENST00000423987 2213 ntBASIC3.05□□□□□ -1.92
PER3P56645 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
PER3P56645 ZNF204P-201ENST00000416749 2397 ntBASIC3.04□□□□□ -1.92
PER3P56645 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.04□□□□□ -1.92
PER3P56645 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.04□□□□□ -1.92
PER3P56645 OR56A5-201ENST00000340110 738 ntBASIC3.04□□□□□ -1.92
PER3P56645 AL512633.1-201ENST00000399931 655 ntBASIC3.04□□□□□ -1.92
PER3P56645 RNU2-20P-201ENST00000410425 191 ntBASIC3.04□□□□□ -1.92
PER3P56645 EIF4EP4-201ENST00000424916 578 ntBASIC3.04□□□□□ -1.92
PER3P56645 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.04□□□□□ -1.92
PER3P56645 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.04□□□□□ -1.92
PER3P56645 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.04□□□□□ -1.92
PER3P56645 AC112220.1-201ENST00000434628 355 ntBASIC3.04□□□□□ -1.92
PER3P56645 AC010095.1-201ENST00000443543 144 ntBASIC3.04□□□□□ -1.92
PER3P56645 RPS3P1-201ENST00000456781 192 ntBASIC3.04□□□□□ -1.92
PER3P56645 RPL23AP67-201ENST00000465341 474 ntBASIC3.04□□□□□ -1.92
PER3P56645 RPL31P41-201ENST00000477967 372 ntBASIC3.04□□□□□ -1.92
PER3P56645 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.04□□□□□ -1.92
PER3P56645 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.04□□□□□ -1.92
PER3P56645 AC022080.3-201ENST00000544433 482 ntBASIC3.04□□□□□ -1.92
PER3P56645 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.04□□□□□ -1.92
PER3P56645 MIR4300-201ENST00000581016 96 ntBASIC3.04□□□□□ -1.92
PER3P56645 AC008739.2-201ENST00000597006 317 ntBASIC3.04□□□□□ -1.92
PER3P56645 AL162713.1-201ENST00000604480 262 ntBASIC3.04□□□□□ -1.92
PER3P56645 AC093732.2-201ENST00000607950 274 ntBASIC3.04□□□□□ -1.92
PER3P56645 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.04□□□□□ -1.92
PER3P56645 AL357075.2-201ENST00000614906 189 ntBASIC3.04□□□□□ -1.92
PER3P56645 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PER3P56645 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
PER3P56645 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PER3P56645 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
PER3P56645 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
PER3P56645 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PER3P56645 snoU2_19.2-201ENST00000363024 80 ntBASIC3.03□□□□□ -1.92
PER3P56645 SNORA5B-201ENST00000363786 132 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 162.2 ms