Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.26□□□□□ -1.89
GFRA1P56159 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
GFRA1P56159 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
GFRA1P56159 RNU6-1248P-201ENST00000391096 64 ntBASIC3.26□□□□□ -1.89
GFRA1P56159 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
GFRA1P56159 RNA5SP504-201ENST00000410676 117 ntBASIC3.26□□□□□ -1.89
GFRA1P56159 Y_RNA.793-201ENST00000411222 111 ntBASIC3.26□□□□□ -1.89
GFRA1P56159 RPS29P4-201ENST00000414733 161 ntBASIC3.26□□□□□ -1.89
GFRA1P56159 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.26□□□□□ -1.89
GFRA1P56159 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
GFRA1P56159 RBMY2UP-201ENST00000453474 324 ntBASIC3.26□□□□□ -1.89
GFRA1P56159 COX6CP14-201ENST00000469580 174 ntBASIC3.26□□□□□ -1.89
GFRA1P56159 RNU6-966P-201ENST00000516479 104 ntBASIC3.26□□□□□ -1.89
GFRA1P56159 RNU5F-4P-201ENST00000516581 114 ntBASIC3.26□□□□□ -1.89
GFRA1P56159 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.26□□□□□ -1.89
GFRA1P56159 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.26□□□□□ -1.89
GFRA1P56159 MIR486-1-201ENST00000612171 68 ntBASIC3.26□□□□□ -1.89
GFRA1P56159 MIR7157-201ENST00000635801 60 ntBASIC3.26□□□□□ -1.89
GFRA1P56159 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
GFRA1P56159 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.26□□□□□ -1.89
GFRA1P56159 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.26□□□□□ -1.89
GFRA1P56159 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
GFRA1P56159 AC000403.1-201ENST00000613696 3585 ntBASIC3.26□□□□□ -1.89
GFRA1P56159 AL049781.1-201ENST00000623195 3585 ntBASIC3.26□□□□□ -1.89
GFRA1P56159 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
GFRA1P56159 AP003122.5-201ENST00000527668 3766 ntBASIC3.25□□□□□ -1.89
GFRA1P56159 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
GFRA1P56159 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.25□□□□□ -1.89
GFRA1P56159 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
GFRA1P56159 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
GFRA1P56159 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
GFRA1P56159 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.25□□□□□ -1.89
GFRA1P56159 MIR411-201ENST00000362239 96 ntBASIC3.25□□□□□ -1.89
GFRA1P56159 Y_RNA.82-201ENST00000363000 102 ntBASIC3.25□□□□□ -1.89
GFRA1P56159 Y_RNA.92-201ENST00000363043 102 ntBASIC3.25□□□□□ -1.89
GFRA1P56159 RNU4-80P-201ENST00000363200 141 ntBASIC3.25□□□□□ -1.89
GFRA1P56159 Y_RNA.122-201ENST00000363331 96 ntBASIC3.25□□□□□ -1.89
GFRA1P56159 U3.8-201ENST00000363675 217 ntBASIC3.25□□□□□ -1.89
GFRA1P56159 Y_RNA.235-201ENST00000364412 102 ntBASIC3.25□□□□□ -1.89
GFRA1P56159 Y_RNA.292-201ENST00000364904 97 ntBASIC3.25□□□□□ -1.89
GFRA1P56159 Y_RNA.306-201ENST00000365015 102 ntBASIC3.25□□□□□ -1.89
GFRA1P56159 Y_RNA.312-201ENST00000365089 102 ntBASIC3.25□□□□□ -1.89
GFRA1P56159 Y_RNA.322-201ENST00000365151 102 ntBASIC3.25□□□□□ -1.89
GFRA1P56159 RNU6-1289P-201ENST00000384431 106 ntBASIC3.25□□□□□ -1.89
GFRA1P56159 RNU6-1199P-201ENST00000411249 104 ntBASIC3.25□□□□□ -1.89
GFRA1P56159 RHEBP3-201ENST00000411920 351 ntBASIC3.25□□□□□ -1.89
GFRA1P56159 AC024067.1-201ENST00000426199 223 ntBASIC3.25□□□□□ -1.89
GFRA1P56159 AC017083.1-201ENST00000428093 483 ntBASIC3.25□□□□□ -1.89
GFRA1P56159 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.25□□□□□ -1.89
GFRA1P56159 Z75741.1-201ENST00000446793 314 ntBASIC3.25□□□□□ -1.89
GFRA1P56159 Y_RNA.650-201ENST00000459002 102 ntBASIC3.25□□□□□ -1.89
GFRA1P56159 RPS29P12-201ENST00000460178 152 ntBASIC3.25□□□□□ -1.89
GFRA1P56159 RPS29P26-201ENST00000477483 171 ntBASIC3.25□□□□□ -1.89
GFRA1P56159 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.25□□□□□ -1.89
GFRA1P56159 AC110768.1-201ENST00000509222 400 ntBASIC3.25□□□□□ -1.89
GFRA1P56159 Y_RNA.777-201ENST00000516982 102 ntBASIC3.25□□□□□ -1.89
GFRA1P56159 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.25□□□□□ -1.89
GFRA1P56159 MIR3922-201ENST00000585192 84 ntBASIC3.25□□□□□ -1.89
GFRA1P56159 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.25□□□□□ -1.89
GFRA1P56159 Y_RNA.771-201ENST00000598668 102 ntBASIC3.25□□□□□ -1.89
GFRA1P56159 AC004792.1-201ENST00000614523 137 ntBASIC3.25□□□□□ -1.89
GFRA1P56159 Y_RNA.789-201ENST00000622480 102 ntBASIC3.25□□□□□ -1.89
GFRA1P56159 AC008873.1-201ENST00000625051 138 ntBASIC3.25□□□□□ -1.89
GFRA1P56159 MIR7515-201ENST00000637837 67 ntBASIC3.25□□□□□ -1.89
GFRA1P56159 AC010329.5-201ENST00000623497 2174 ntBASIC3.25□□□□□ -1.89
GFRA1P56159 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
GFRA1P56159 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
GFRA1P56159 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
GFRA1P56159 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
GFRA1P56159 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
GFRA1P56159 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.24□□□□□ -1.89
GFRA1P56159 RNU6-324P-201ENST00000363957 106 ntBASIC3.24□□□□□ -1.89
GFRA1P56159 MIR1294-201ENST00000408503 142 ntBASIC3.24□□□□□ -1.89
GFRA1P56159 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.24□□□□□ -1.89
GFRA1P56159 MICF-203ENST00000432679 129 ntBASIC3.24□□□□□ -1.89
GFRA1P56159 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.24□□□□□ -1.89
GFRA1P56159 Y_RNA.644-201ENST00000459006 113 ntBASIC3.24□□□□□ -1.89
GFRA1P56159 SRIP1-201ENST00000489235 288 ntBASIC3.24□□□□□ -1.89
GFRA1P56159 Y_RNA.674-201ENST00000516362 113 ntBASIC3.24□□□□□ -1.89
GFRA1P56159 RNU6-579P-201ENST00000516879 102 ntBASIC3.24□□□□□ -1.89
GFRA1P56159 RNU2-12P-201ENST00000517216 168 ntBASIC3.24□□□□□ -1.89
GFRA1P56159 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.24□□□□□ -1.89
GFRA1P56159 MIR3145-201ENST00000580727 82 ntBASIC3.24□□□□□ -1.89
GFRA1P56159 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.24□□□□□ -1.89
GFRA1P56159 U3.45-201ENST00000607547 219 ntBASIC3.24□□□□□ -1.89
GFRA1P56159 AC103988.1-201ENST00000566382 2177 ntBASIC3.24□□□□□ -1.89
GFRA1P56159 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
GFRA1P56159 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
GFRA1P56159 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.23□□□□□ -1.89
GFRA1P56159 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
GFRA1P56159 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
GFRA1P56159 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
GFRA1P56159 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.23□□□□□ -1.89
GFRA1P56159 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
GFRA1P56159 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
GFRA1P56159 RNU6-1305P-201ENST00000364353 104 ntBASIC3.23□□□□□ -1.89
GFRA1P56159 RNY4P28-201ENST00000365281 93 ntBASIC3.23□□□□□ -1.89
GFRA1P56159 RNU6-662P-201ENST00000384253 104 ntBASIC3.23□□□□□ -1.89
GFRA1P56159 SNORA67.2-201ENST00000384300 149 ntBASIC3.23□□□□□ -1.89
GFRA1P56159 Y_RNA.555-201ENST00000384673 110 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 166.9 ms