Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.96□□□□□ -1.78
USP11P51784 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
USP11P51784 AL356274.2-201ENST00000624379 3752 ntBASIC3.96□□□□□ -1.78
USP11P51784 SRP72P2-201ENST00000344851 1979 ntBASIC3.96□□□□□ -1.78
USP11P51784 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
USP11P51784 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
USP11P51784 RNU6-799P-201ENST00000363567 107 ntBASIC3.95□□□□□ -1.78
USP11P51784 Y_RNA.179-201ENST00000363844 90 ntBASIC3.95□□□□□ -1.78
USP11P51784 Y_RNA.218-201ENST00000364218 104 ntBASIC3.95□□□□□ -1.78
USP11P51784 RNU4-17P-201ENST00000365598 141 ntBASIC3.95□□□□□ -1.78
USP11P51784 SNORD17-201ENST00000390930 237 ntBASIC3.95□□□□□ -1.78
USP11P51784 RNU6-239P-201ENST00000390990 99 ntBASIC3.95□□□□□ -1.78
USP11P51784 RNU6-1197P-201ENST00000391183 107 ntBASIC3.95□□□□□ -1.78
USP11P51784 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
USP11P51784 RNU2-54P-201ENST00000410299 190 ntBASIC3.95□□□□□ -1.78
USP11P51784 RPS26P42-201ENST00000413485 326 ntBASIC3.95□□□□□ -1.78
USP11P51784 RPL26P27-201ENST00000414397 437 ntBASIC3.95□□□□□ -1.78
USP11P51784 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.95□□□□□ -1.78
USP11P51784 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.95□□□□□ -1.78
USP11P51784 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.95□□□□□ -1.78
USP11P51784 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.95□□□□□ -1.78
USP11P51784 AC091179.3-201ENST00000474761 144 ntBASIC3.95□□□□□ -1.78
USP11P51784 AC090616.3-201ENST00000582184 217 ntBASIC3.95□□□□□ -1.78
USP11P51784 AC022149.2-201ENST00000621061 203 ntBASIC3.95□□□□□ -1.78
USP11P51784 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.95□□□□□ -1.78
USP11P51784 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.95□□□□□ -1.78
USP11P51784 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.95□□□□□ -1.78
USP11P51784 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
USP11P51784 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
USP11P51784 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
USP11P51784 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
USP11P51784 RNU6-884P-201ENST00000363889 107 ntBASIC3.94□□□□□ -1.78
USP11P51784 RNU6-275P-201ENST00000364910 107 ntBASIC3.94□□□□□ -1.78
USP11P51784 SNORA26.3-201ENST00000391119 136 ntBASIC3.94□□□□□ -1.78
USP11P51784 MIR888-201ENST00000401186 77 ntBASIC3.94□□□□□ -1.78
USP11P51784 AC009963.1-201ENST00000417265 157 ntBASIC3.94□□□□□ -1.78
USP11P51784 AC012306.1-201ENST00000423267 114 ntBASIC3.94□□□□□ -1.78
USP11P51784 AC078809.1-201ENST00000427601 140 ntBASIC3.94□□□□□ -1.78
USP11P51784 MTND4LP9-201ENST00000427694 174 ntBASIC3.94□□□□□ -1.78
USP11P51784 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.94□□□□□ -1.78
USP11P51784 AL357552.1-201ENST00000445254 415 ntBASIC3.94□□□□□ -1.78
USP11P51784 RNU6-971P-201ENST00000516920 106 ntBASIC3.94□□□□□ -1.78
USP11P51784 AC100767.1-201ENST00000528178 123 ntBASIC3.94□□□□□ -1.78
USP11P51784 AC021231.3-201ENST00000558497 370 ntBASIC3.94□□□□□ -1.78
USP11P51784 MIR548X2-201ENST00000579776 100 ntBASIC3.94□□□□□ -1.78
USP11P51784 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.94□□□□□ -1.78
USP11P51784 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.94□□□□□ -1.78
USP11P51784 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.94□□□□□ -1.78
USP11P51784 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.94□□□□□ -1.78
USP11P51784 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
USP11P51784 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
USP11P51784 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.94□□□□□ -1.78
USP11P51784 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.94□□□□□ -1.78
USP11P51784 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.93□□□□□ -1.78
USP11P51784 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.93□□□□□ -1.78
USP11P51784 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
USP11P51784 RNU4-35P-201ENST00000362588 141 ntBASIC3.93□□□□□ -1.78
USP11P51784 Y_RNA.273-201ENST00000364703 102 ntBASIC3.93□□□□□ -1.78
USP11P51784 Y_RNA.329-201ENST00000365209 107 ntBASIC3.93□□□□□ -1.78
USP11P51784 SNORA40.19-201ENST00000390846 128 ntBASIC3.93□□□□□ -1.78
USP11P51784 RNU6-763P-201ENST00000390865 106 ntBASIC3.93□□□□□ -1.78
USP11P51784 RNU6-381P-201ENST00000391259 108 ntBASIC3.93□□□□□ -1.78
USP11P51784 EI24P2-201ENST00000397776 1076 ntBASIC3.93□□□□□ -1.78
USP11P51784 AL512633.1-201ENST00000399931 655 ntBASIC3.93□□□□□ -1.78
USP11P51784 AC244670.1-201ENST00000436879 112 ntBASIC3.93□□□□□ -1.78
USP11P51784 AC007215.1-201ENST00000464893 276 ntBASIC3.93□□□□□ -1.78
USP11P51784 AC025518.1-201ENST00000479856 347 ntBASIC3.93□□□□□ -1.78
USP11P51784 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.93□□□□□ -1.78
USP11P51784 RNU6-1282P-201ENST00000516735 96 ntBASIC3.93□□□□□ -1.78
USP11P51784 IGKV2-26-201ENST00000518305 343 ntBASIC3.93□□□□□ -1.78
USP11P51784 CYCSP23-201ENST00000519781 313 ntBASIC3.93□□□□□ -1.78
USP11P51784 TGIF1P1-201ENST00000558095 802 ntBASIC3.93□□□□□ -1.78
USP11P51784 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.93□□□□□ -1.78
USP11P51784 MIR3529-201ENST00000637713 78 ntBASIC3.93□□□□□ -1.78
USP11P51784 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
USP11P51784 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
USP11P51784 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
USP11P51784 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.92□□□□□ -1.78
USP11P51784 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
USP11P51784 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
USP11P51784 AC092268.1-201ENST00000342691 405 ntBASIC3.92□□□□□ -1.78
USP11P51784 Y_RNA.71-201ENST00000362892 104 ntBASIC3.92□□□□□ -1.78
USP11P51784 Y_RNA.127-201ENST00000363386 109 ntBASIC3.92□□□□□ -1.78
USP11P51784 RNA5SP50-201ENST00000363731 107 ntBASIC3.92□□□□□ -1.78
USP11P51784 MIR183-201ENST00000384958 110 ntBASIC3.92□□□□□ -1.78
USP11P51784 SNORA40-201ENST00000388090 126 ntBASIC3.92□□□□□ -1.78
USP11P51784 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.92□□□□□ -1.78
USP11P51784 AL035461.1-201ENST00000421490 332 ntBASIC3.92□□□□□ -1.78
USP11P51784 HMGN2P30-201ENST00000423237 256 ntBASIC3.92□□□□□ -1.78
USP11P51784 CR769767.1-201ENST00000436337 346 ntBASIC3.92□□□□□ -1.78
USP11P51784 AL135790.2-201ENST00000437701 267 ntBASIC3.92□□□□□ -1.78
USP11P51784 AL137159.1-201ENST00000452808 512 ntBASIC3.92□□□□□ -1.78
USP11P51784 RPS4XP13-201ENST00000483219 789 ntBASIC3.92□□□□□ -1.78
USP11P51784 RPL30P5-201ENST00000494923 336 ntBASIC3.92□□□□□ -1.78
USP11P51784 SNORA70.19-201ENST00000516717 90 ntBASIC3.92□□□□□ -1.78
USP11P51784 SNORA31.16-201ENST00000516773 139 ntBASIC3.92□□□□□ -1.78
USP11P51784 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.92□□□□□ -1.78
USP11P51784 AL451007.1-201ENST00000595491 289 ntBASIC3.92□□□□□ -1.78
USP11P51784 AL161756.2-201ENST00000604597 246 ntBASIC3.92□□□□□ -1.78
USP11P51784 RNVU1-4-201ENST00000612985 164 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms