Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 Six3os1_7.1-201ENST00000621512 201 ntBASIC4.03□□□□□ -1.76
RNF144AP50876 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.03□□□□□ -1.76
RNF144AP50876 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
RNF144AP50876 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
RNF144AP50876 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RNF144AP50876 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RNF144AP50876 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
RNF144AP50876 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RNF144AP50876 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.02□□□□□ -1.77
RNF144AP50876 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.02□□□□□ -1.77
RNF144AP50876 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RNF144AP50876 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RNF144AP50876 SNORA31-201ENST00000362607 130 ntBASIC4.02□□□□□ -1.77
RNF144AP50876 RNA5SP307-201ENST00000362863 116 ntBASIC4.02□□□□□ -1.77
RNF144AP50876 SNORA72-201ENST00000384339 132 ntBASIC4.02□□□□□ -1.77
RNF144AP50876 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RNF144AP50876 AL139095.1-201ENST00000404326 391 ntBASIC4.02□□□□□ -1.77
RNF144AP50876 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.02□□□□□ -1.77
RNF144AP50876 RPL23AP52-201ENST00000439311 478 ntBASIC4.02□□□□□ -1.77
RNF144AP50876 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.02□□□□□ -1.77
RNF144AP50876 SNORA18.4-201ENST00000516440 124 ntBASIC4.02□□□□□ -1.77
RNF144AP50876 MIR4644-201ENST00000579929 84 ntBASIC4.02□□□□□ -1.77
RNF144AP50876 MIR3690-201ENST00000580266 75 ntBASIC4.02□□□□□ -1.77
RNF144AP50876 AL022345.2-201ENST00000606307 135 ntBASIC4.02□□□□□ -1.77
RNF144AP50876 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RNF144AP50876 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.02□□□□□ -1.77
RNF144AP50876 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4.02□□□□□ -1.77
RNF144AP50876 AC068647.1-201ENST00000489539 2265 ntBASIC4.02□□□□□ -1.77
RNF144AP50876 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RNF144AP50876 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RNF144AP50876 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
RNF144AP50876 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RNF144AP50876 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.02□□□□□ -1.77
RNF144AP50876 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.01□□□□□ -1.77
RNF144AP50876 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RNF144AP50876 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RNF144AP50876 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.01□□□□□ -1.77
RNF144AP50876 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
RNF144AP50876 ANKRD20A9P-201ENST00000457997 2978 ntBASIC4.01□□□□□ -1.77
RNF144AP50876 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RNF144AP50876 AC010300.1-201ENST00000600671 5134 ntBASIC4.01□□□□□ -1.77
RNF144AP50876 RNA5SP447-201ENST00000363749 119 ntBASIC4.01□□□□□ -1.77
RNF144AP50876 RNA5SP167-201ENST00000365461 116 ntBASIC4.01□□□□□ -1.77
RNF144AP50876 RNU2-49P-201ENST00000410666 184 ntBASIC4.01□□□□□ -1.77
RNF144AP50876 YME1L1P1-201ENST00000429435 297 ntBASIC4.01□□□□□ -1.77
RNF144AP50876 AL353705.1-201ENST00000433468 480 ntBASIC4.01□□□□□ -1.77
RNF144AP50876 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.01□□□□□ -1.77
RNF144AP50876 AC023449.1-201ENST00000454464 154 ntBASIC4.01□□□□□ -1.77
RNF144AP50876 RNU7-57P-201ENST00000459540 60 ntBASIC4.01□□□□□ -1.77
RNF144AP50876 AC083906.5-201ENST00000503722 328 ntBASIC4.01□□□□□ -1.77
RNF144AP50876 PARP4P3-201ENST00000510265 317 ntBASIC4.01□□□□□ -1.77
RNF144AP50876 AC010598.1-201ENST00000510378 103 ntBASIC4.01□□□□□ -1.77
RNF144AP50876 RNU5F-4P-201ENST00000516581 114 ntBASIC4.01□□□□□ -1.77
RNF144AP50876 RNU6-63P-201ENST00000516690 95 ntBASIC4.01□□□□□ -1.77
RNF144AP50876 AC027419.1-201ENST00000522976 328 ntBASIC4.01□□□□□ -1.77
RNF144AP50876 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.01□□□□□ -1.77
RNF144AP50876 MIR6748-201ENST00000610433 71 ntBASIC4.01□□□□□ -1.77
RNF144AP50876 AL110115.1-201ENST00000614396 364 ntBASIC4.01□□□□□ -1.77
RNF144AP50876 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RNF144AP50876 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.01□□□□□ -1.77
RNF144AP50876 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4.01□□□□□ -1.77
RNF144AP50876 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
RNF144AP50876 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
RNF144AP50876 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4□□□□□ -1.77
RNF144AP50876 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4□□□□□ -1.77
RNF144AP50876 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
RNF144AP50876 Y_RNA.91-201ENST00000363042 107 ntBASIC4□□□□□ -1.77
RNF144AP50876 RNU4-13P-201ENST00000364019 141 ntBASIC4□□□□□ -1.77
RNF144AP50876 SNORD74.4-201ENST00000364129 80 ntBASIC4□□□□□ -1.77
RNF144AP50876 Y_RNA.634-201ENST00000364811 113 ntBASIC4□□□□□ -1.77
RNF144AP50876 U8.6-201ENST00000364939 135 ntBASIC4□□□□□ -1.77
RNF144AP50876 RNU6-294P-201ENST00000364999 102 ntBASIC4□□□□□ -1.77
RNF144AP50876 RNU1-57P-201ENST00000384491 166 ntBASIC4□□□□□ -1.77
RNF144AP50876 MIR129-1-201ENST00000384972 72 ntBASIC4□□□□□ -1.77
RNF144AP50876 MIR513A2-201ENST00000385249 127 ntBASIC4□□□□□ -1.77
RNF144AP50876 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4□□□□□ -1.77
RNF144AP50876 SNORD66.1-201ENST00000391230 76 ntBASIC4□□□□□ -1.77
RNF144AP50876 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4□□□□□ -1.77
RNF144AP50876 PHBP16-201ENST00000446318 950 ntBASIC4□□□□□ -1.77
RNF144AP50876 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC4□□□□□ -1.77
RNF144AP50876 AL162591.2-201ENST00000449634 317 ntBASIC4□□□□□ -1.77
RNF144AP50876 SNORD65B-201ENST00000459126 73 ntBASIC4□□□□□ -1.77
RNF144AP50876 AC080013.2-201ENST00000460866 323 ntBASIC4□□□□□ -1.77
RNF144AP50876 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4□□□□□ -1.77
RNF144AP50876 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4□□□□□ -1.77
RNF144AP50876 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4□□□□□ -1.77
RNF144AP50876 AC006971.1-201ENST00000407916 4486 ntBASIC4□□□□□ -1.77
RNF144AP50876 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4□□□□□ -1.77
RNF144AP50876 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
RNF144AP50876 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
RNF144AP50876 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
RNF144AP50876 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
RNF144AP50876 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.99□□□□□ -1.77
RNF144AP50876 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.99□□□□□ -1.77
RNF144AP50876 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RNF144AP50876 AC103988.1-201ENST00000566382 2177 ntBASIC3.99□□□□□ -1.77
RNF144AP50876 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
RNF144AP50876 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.99□□□□□ -1.77
RNF144AP50876 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
RNF144AP50876 SNORD14D-201ENST00000384390 87 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms