Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 RNU4-66P-201ENST00000365199 138 ntBASIC1.35□□□□□ -2.19
CX3CR1P49238 RNU6-438P-201ENST00000365561 103 ntBASIC1.35□□□□□ -2.19
CX3CR1P49238 Y_RNA.372-201ENST00000365599 102 ntBASIC1.35□□□□□ -2.19
CX3CR1P49238 Y_RNA.559-201ENST00000384686 107 ntBASIC1.35□□□□□ -2.19
CX3CR1P49238 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.35□□□□□ -2.19
CX3CR1P49238 OOSP1P1-201ENST00000423265 274 ntBASIC1.35□□□□□ -2.19
CX3CR1P49238 AC139712.2-201ENST00000424302 339 ntBASIC1.35□□□□□ -2.19
CX3CR1P49238 AC078809.1-201ENST00000427601 140 ntBASIC1.35□□□□□ -2.19
CX3CR1P49238 AL589823.1-201ENST00000429577 183 ntBASIC1.35□□□□□ -2.19
CX3CR1P49238 C8orf59P1-201ENST00000429930 303 ntBASIC1.35□□□□□ -2.19
CX3CR1P49238 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC1.35□□□□□ -2.19
CX3CR1P49238 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.35□□□□□ -2.19
CX3CR1P49238 RNU7-138P-201ENST00000459479 64 ntBASIC1.35□□□□□ -2.19
CX3CR1P49238 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.35□□□□□ -2.19
CX3CR1P49238 AC114801.2-201ENST00000503825 781 ntBASIC1.35□□□□□ -2.19
CX3CR1P49238 AC096745.1-201ENST00000509945 370 ntBASIC1.35□□□□□ -2.19
CX3CR1P49238 AC025465.3-201ENST00000510570 311 ntBASIC1.35□□□□□ -2.19
CX3CR1P49238 RNU6-323P-201ENST00000521915 107 ntBASIC1.35□□□□□ -2.19
CX3CR1P49238 AC104576.1-201ENST00000524225 88 ntBASIC1.35□□□□□ -2.19
CX3CR1P49238 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
CX3CR1P49238 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.35□□□□□ -2.19
CX3CR1P49238 AC025423.5-201ENST00000550230 219 ntBASIC1.35□□□□□ -2.19
CX3CR1P49238 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.35□□□□□ -2.19
CX3CR1P49238 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.35□□□□□ -2.19
CX3CR1P49238 MIR3923-201ENST00000579521 83 ntBASIC1.35□□□□□ -2.19
CX3CR1P49238 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.35□□□□□ -2.19
CX3CR1P49238 AF250324.2-201ENST00000608299 610 ntBASIC1.35□□□□□ -2.19
CX3CR1P49238 RNU6-1322P-201ENST00000364309 107 ntBASIC1.34□□□□□ -2.19
CX3CR1P49238 RNU4-24P-201ENST00000364565 139 ntBASIC1.34□□□□□ -2.19
CX3CR1P49238 Y_RNA.504-201ENST00000384481 104 ntBASIC1.34□□□□□ -2.19
CX3CR1P49238 SNORA26.9-201ENST00000391322 122 ntBASIC1.34□□□□□ -2.19
CX3CR1P49238 RNU2-41P-201ENST00000410991 178 ntBASIC1.34□□□□□ -2.19
CX3CR1P49238 AP000275.1-201ENST00000411943 390 ntBASIC1.34□□□□□ -2.19
CX3CR1P49238 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.34□□□□□ -2.19
CX3CR1P49238 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.34□□□□□ -2.19
CX3CR1P49238 TIMM9P3-201ENST00000428659 274 ntBASIC1.34□□□□□ -2.19
CX3CR1P49238 MTCO2P3-201ENST00000442543 421 ntBASIC1.34□□□□□ -2.19
CX3CR1P49238 AL357134.1-201ENST00000445848 426 ntBASIC1.34□□□□□ -2.19
CX3CR1P49238 MTATP6P26-201ENST00000445926 662 ntBASIC1.34□□□□□ -2.19
CX3CR1P49238 snoU13.9-201ENST00000458927 103 ntBASIC1.34□□□□□ -2.19
CX3CR1P49238 AC007547.1-201ENST00000462177 490 ntBASIC1.34□□□□□ -2.19
CX3CR1P49238 SRRM1P2-201ENST00000464531 1192 ntBASIC1.34□□□□□ -2.19
CX3CR1P49238 AC087477.1-201ENST00000465747 340 ntBASIC1.34□□□□□ -2.19
CX3CR1P49238 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.34□□□□□ -2.19
CX3CR1P49238 AC092436.3-201ENST00000511788 257 ntBASIC1.34□□□□□ -2.19
CX3CR1P49238 Y_RNA.675-201ENST00000516389 149 ntBASIC1.34□□□□□ -2.19
CX3CR1P49238 Y_RNA.693-201ENST00000516641 110 ntBASIC1.34□□□□□ -2.19
CX3CR1P49238 AC069113.1-201ENST00000517763 267 ntBASIC1.34□□□□□ -2.19
CX3CR1P49238 DEFB131C-201ENST00000528817 165 ntBASIC1.34□□□□□ -2.19
CX3CR1P49238 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.34□□□□□ -2.19
CX3CR1P49238 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.34□□□□□ -2.19
CX3CR1P49238 Z98751.3-201ENST00000604447 521 ntBASIC1.34□□□□□ -2.19
CX3CR1P49238 AC104458.1-201ENST00000608243 463 ntBASIC1.34□□□□□ -2.19
CX3CR1P49238 PCGEM1.1-201ENST00000613431 131 ntBASIC1.34□□□□□ -2.19
CX3CR1P49238 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.34□□□□□ -2.19
CX3CR1P49238 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
CX3CR1P49238 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.34□□□□□ -2.2
CX3CR1P49238 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.34□□□□□ -2.2
CX3CR1P49238 WWP1P1-201ENST00000466609 2769 ntBASIC1.34□□□□□ -2.2
CX3CR1P49238 MTND5P9-201ENST00000503854 1755 ntBASIC1.34□□□□□ -2.2
CX3CR1P49238 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
CX3CR1P49238 Y_RNA.67-201ENST00000362870 100 ntBASIC1.33□□□□□ -2.2
CX3CR1P49238 RNU6-483P-201ENST00000384088 108 ntBASIC1.33□□□□□ -2.2
CX3CR1P49238 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.33□□□□□ -2.2
CX3CR1P49238 MIR1304-201ENST00000408243 91 ntBASIC1.33□□□□□ -2.2
CX3CR1P49238 RNU6-908P-201ENST00000410160 94 ntBASIC1.33□□□□□ -2.2
CX3CR1P49238 RPL21P111-201ENST00000418453 477 ntBASIC1.33□□□□□ -2.2
CX3CR1P49238 AC007098.1-201ENST00000420122 367 ntBASIC1.33□□□□□ -2.2
CX3CR1P49238 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
CX3CR1P49238 MTCO1P44-201ENST00000441935 243 ntBASIC1.33□□□□□ -2.2
CX3CR1P49238 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.33□□□□□ -2.2
CX3CR1P49238 snoU13.6-201ENST00000458785 104 ntBASIC1.33□□□□□ -2.2
CX3CR1P49238 snoU13.15-201ENST00000459407 104 ntBASIC1.33□□□□□ -2.2
CX3CR1P49238 RNU6-1208P-201ENST00000459588 107 ntBASIC1.33□□□□□ -2.2
CX3CR1P49238 AC083904.1-201ENST00000487828 231 ntBASIC1.33□□□□□ -2.2
CX3CR1P49238 AC008628.2-201ENST00000502605 298 ntBASIC1.33□□□□□ -2.2
CX3CR1P49238 AC107401.1-201ENST00000503426 685 ntBASIC1.33□□□□□ -2.2
CX3CR1P49238 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.33□□□□□ -2.2
CX3CR1P49238 SNORD60.2-201ENST00000516883 86 ntBASIC1.33□□□□□ -2.2
CX3CR1P49238 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.33□□□□□ -2.2
CX3CR1P49238 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.33□□□□□ -2.2
CX3CR1P49238 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.33□□□□□ -2.2
CX3CR1P49238 MIR3945-201ENST00000581853 98 ntBASIC1.33□□□□□ -2.2
CX3CR1P49238 AC068205.3-201ENST00000636385 468 ntBASIC1.33□□□□□ -2.2
CX3CR1P49238 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CX3CR1P49238 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CX3CR1P49238 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
CX3CR1P49238 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.32□□□□□ -2.2
CX3CR1P49238 RNU6-1085P-201ENST00000363576 107 ntBASIC1.32□□□□□ -2.2
CX3CR1P49238 U3.9-201ENST00000363823 204 ntBASIC1.32□□□□□ -2.2
CX3CR1P49238 RNU6-82P-201ENST00000363970 107 ntBASIC1.32□□□□□ -2.2
CX3CR1P49238 RNU6-1317P-201ENST00000364582 104 ntBASIC1.32□□□□□ -2.2
CX3CR1P49238 RNU6-1329P-201ENST00000365664 107 ntBASIC1.32□□□□□ -2.2
CX3CR1P49238 Y_RNA.436-201ENST00000384097 102 ntBASIC1.32□□□□□ -2.2
CX3CR1P49238 RNU6-296P-201ENST00000384608 107 ntBASIC1.32□□□□□ -2.2
CX3CR1P49238 MIR320A-201ENST00000385302 82 ntBASIC1.32□□□□□ -2.2
CX3CR1P49238 SNORD37.1-201ENST00000390968 65 ntBASIC1.32□□□□□ -2.2
CX3CR1P49238 RNU1-78P-201ENST00000391248 165 ntBASIC1.32□□□□□ -2.2
CX3CR1P49238 MIR1323-201ENST00000408090 73 ntBASIC1.32□□□□□ -2.2
CX3CR1P49238 MIR1289-2-201ENST00000408360 111 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms