Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 RNU7-175P-201ENST00000515915 61 ntBASIC2.84□□□□□ -1.95
TM4SF4P48230 RNU6-277P-201ENST00000516272 106 ntBASIC2.84□□□□□ -1.95
TM4SF4P48230 RNU6-264P-201ENST00000517134 104 ntBASIC2.84□□□□□ -1.95
TM4SF4P48230 AL590705.4-201ENST00000532209 134 ntBASIC2.84□□□□□ -1.95
TM4SF4P48230 AC021269.2-201ENST00000532318 330 ntBASIC2.84□□□□□ -1.95
TM4SF4P48230 CBX3P7-201ENST00000532876 502 ntBASIC2.84□□□□□ -1.95
TM4SF4P48230 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.84□□□□□ -1.95
TM4SF4P48230 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.84□□□□□ -1.95
TM4SF4P48230 AL078605.1-201ENST00000603529 500 ntBASIC2.84□□□□□ -1.95
TM4SF4P48230 AC103810.6-201ENST00000606708 136 ntBASIC2.84□□□□□ -1.95
TM4SF4P48230 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.84□□□□□ -1.95
TM4SF4P48230 AL450472.1-202ENST00000637286 180 ntBASIC2.84□□□□□ -1.95
TM4SF4P48230 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.95
TM4SF4P48230 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
TM4SF4P48230 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.84□□□□□ -1.96
TM4SF4P48230 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
TM4SF4P48230 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.83□□□□□ -1.96
TM4SF4P48230 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.83□□□□□ -1.96
TM4SF4P48230 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
TM4SF4P48230 Y_RNA.164-201ENST00000363709 102 ntBASIC2.83□□□□□ -1.96
TM4SF4P48230 RNU6-1188P-201ENST00000363795 107 ntBASIC2.83□□□□□ -1.96
TM4SF4P48230 RNA5SP456-201ENST00000364002 114 ntBASIC2.83□□□□□ -1.96
TM4SF4P48230 RNU4-14P-201ENST00000410858 122 ntBASIC2.83□□□□□ -1.96
TM4SF4P48230 RNU2-32P-201ENST00000411193 191 ntBASIC2.83□□□□□ -1.96
TM4SF4P48230 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.83□□□□□ -1.96
TM4SF4P48230 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.83□□□□□ -1.96
TM4SF4P48230 OR2AQ1P-201ENST00000451972 200 ntBASIC2.83□□□□□ -1.96
TM4SF4P48230 RPL30P15-201ENST00000457129 321 ntBASIC2.83□□□□□ -1.96
TM4SF4P48230 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.83□□□□□ -1.96
TM4SF4P48230 snoU13.30-201ENST00000458951 104 ntBASIC2.83□□□□□ -1.96
TM4SF4P48230 RPL23AP75-201ENST00000491601 451 ntBASIC2.83□□□□□ -1.96
TM4SF4P48230 RNU6-1198P-201ENST00000516904 67 ntBASIC2.83□□□□□ -1.96
TM4SF4P48230 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.83□□□□□ -1.96
TM4SF4P48230 EIF4A1P12-201ENST00000551910 141 ntBASIC2.83□□□□□ -1.96
TM4SF4P48230 SNRPGP18-201ENST00000553000 214 ntBASIC2.83□□□□□ -1.96
TM4SF4P48230 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.83□□□□□ -1.96
TM4SF4P48230 MIR5696-201ENST00000578474 85 ntBASIC2.83□□□□□ -1.96
TM4SF4P48230 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.83□□□□□ -1.96
TM4SF4P48230 LARP7P1-201ENST00000605576 316 ntBASIC2.83□□□□□ -1.96
TM4SF4P48230 PCGEM1.1-201ENST00000613431 131 ntBASIC2.83□□□□□ -1.96
TM4SF4P48230 MIR7111-201ENST00000619751 72 ntBASIC2.83□□□□□ -1.96
TM4SF4P48230 AC112487.2-201ENST00000637950 304 ntBASIC2.83□□□□□ -1.96
TM4SF4P48230 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
TM4SF4P48230 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
TM4SF4P48230 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
TM4SF4P48230 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.82□□□□□ -1.96
TM4SF4P48230 Y_RNA.67-201ENST00000362870 100 ntBASIC2.82□□□□□ -1.96
TM4SF4P48230 RNU5B-2P-201ENST00000363036 113 ntBASIC2.82□□□□□ -1.96
TM4SF4P48230 RNU4-73P-201ENST00000363164 141 ntBASIC2.82□□□□□ -1.96
TM4SF4P48230 RNU1-91P-201ENST00000364746 163 ntBASIC2.82□□□□□ -1.96
TM4SF4P48230 RNU6-805P-201ENST00000365643 106 ntBASIC2.82□□□□□ -1.96
TM4SF4P48230 RNU6-541P-201ENST00000384709 110 ntBASIC2.82□□□□□ -1.96
TM4SF4P48230 MIR153-2-201ENST00000385225 87 ntBASIC2.82□□□□□ -1.96
TM4SF4P48230 RNA5SP201-201ENST00000410316 124 ntBASIC2.82□□□□□ -1.96
TM4SF4P48230 RPS26P42-201ENST00000413485 326 ntBASIC2.82□□□□□ -1.96
TM4SF4P48230 AC243428.1-201ENST00000421099 264 ntBASIC2.82□□□□□ -1.96
TM4SF4P48230 RPL23AP42-201ENST00000471152 471 ntBASIC2.82□□□□□ -1.96
TM4SF4P48230 RN7SL283P-201ENST00000489055 303 ntBASIC2.82□□□□□ -1.96
TM4SF4P48230 Y_RNA.706-201ENST00000516933 99 ntBASIC2.82□□□□□ -1.96
TM4SF4P48230 CBX3P8-201ENST00000532412 525 ntBASIC2.82□□□□□ -1.96
TM4SF4P48230 RMST_6.1-201ENST00000611980 203 ntBASIC2.82□□□□□ -1.96
TM4SF4P48230 AC005520.5-201ENST00000613926 164 ntBASIC2.82□□□□□ -1.96
TM4SF4P48230 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.82□□□□□ -1.96
TM4SF4P48230 AC098657.3-201ENST00000620434 263 ntBASIC2.82□□□□□ -1.96
TM4SF4P48230 AC008264.2-201ENST00000610193 3731 ntBASIC2.82□□□□□ -1.96
TM4SF4P48230 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
TM4SF4P48230 SNORD115-32-201ENST00000364079 82 ntBASIC2.81□□□□□ -1.96
TM4SF4P48230 Y_RNA.338-201ENST00000365320 114 ntBASIC2.81□□□□□ -1.96
TM4SF4P48230 MIR32-201ENST00000384965 70 ntBASIC2.81□□□□□ -1.96
TM4SF4P48230 RNA5SP344-201ENST00000411081 104 ntBASIC2.81□□□□□ -1.96
TM4SF4P48230 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
TM4SF4P48230 AF186996.7-201ENST00000492781 209 ntBASIC2.81□□□□□ -1.96
TM4SF4P48230 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.81□□□□□ -1.96
TM4SF4P48230 AC022616.8-201ENST00000533569 253 ntBASIC2.81□□□□□ -1.96
TM4SF4P48230 AC018630.3-201ENST00000542637 96 ntBASIC2.81□□□□□ -1.96
TM4SF4P48230 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.81□□□□□ -1.96
TM4SF4P48230 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.81□□□□□ -1.96
TM4SF4P48230 AC090517.1-201ENST00000569307 266 ntBASIC2.81□□□□□ -1.96
TM4SF4P48230 RPL17P51-201ENST00000605218 238 ntBASIC2.81□□□□□ -1.96
TM4SF4P48230 AC100812.1-201ENST00000607622 580 ntBASIC2.81□□□□□ -1.96
TM4SF4P48230 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.81□□□□□ -1.96
TM4SF4P48230 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.81□□□□□ -1.96
TM4SF4P48230 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
TM4SF4P48230 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
TM4SF4P48230 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
TM4SF4P48230 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.8□□□□□ -1.96
TM4SF4P48230 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
TM4SF4P48230 RNU6-595P-201ENST00000363944 107 ntBASIC2.8□□□□□ -1.96
TM4SF4P48230 RNU6-1072P-201ENST00000384703 107 ntBASIC2.8□□□□□ -1.96
TM4SF4P48230 RNU6-443P-201ENST00000384780 107 ntBASIC2.8□□□□□ -1.96
TM4SF4P48230 RNY4P36-201ENST00000391116 96 ntBASIC2.8□□□□□ -1.96
TM4SF4P48230 SNORA12-201ENST00000391162 147 ntBASIC2.8□□□□□ -1.96
TM4SF4P48230 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.8□□□□□ -1.96
TM4SF4P48230 AL353997.1-201ENST00000432936 108 ntBASIC2.8□□□□□ -1.96
TM4SF4P48230 Y_RNA.632-201ENST00000459189 102 ntBASIC2.8□□□□□ -1.96
TM4SF4P48230 RN7SL499P-201ENST00000481141 276 ntBASIC2.8□□□□□ -1.96
TM4SF4P48230 SCARNA16.2-201ENST00000516520 172 ntBASIC2.8□□□□□ -1.96
TM4SF4P48230 APOOP3-201ENST00000536787 586 ntBASIC2.8□□□□□ -1.96
TM4SF4P48230 AC026470.2-201ENST00000561492 181 ntBASIC2.8□□□□□ -1.96
TM4SF4P48230 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms